EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000015126 (Gene tree)
Gene ID: 102307372
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2644 bases
Position: chrJH425622.1:315955-318598
Accession: 102307372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000030236	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000021043	-	798	XM_005940999	ENSHBUP00000030236	265 (aa)	XP_005941061	UPI00032A25E2

Gene Model

Click here to download ENSHBUG00000015126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000015126	rab42a	62	34.756	ENSHBUG00000003434	rab22a	67	34.756
ENSHBUG00000015126	rab42a	57	33.775	ENSHBUG00000011998	hrasb	85	32.927
ENSHBUG00000015126	rab42a	63	37.059	ENSHBUG00000012594	RAB29	83	36.416
ENSHBUG00000015126	rab42a	57	36.842	ENSHBUG00000017973	si:ch73-116o1.2	79	36.145
ENSHBUG00000015126	rab42a	80	38.498	ENSHBUG00000022562	-	97	38.498
ENSHBUG00000015126	rab42a	64	32.941	ENSHBUG00000018763	rras	86	32.941
ENSHBUG00000015126	rab42a	71	47.340	ENSHBUG00000019164	rab2a	88	47.340
ENSHBUG00000015126	rab42a	69	42.077	ENSHBUG00000009333	rab11al	84	42.077
ENSHBUG00000015126	rab42a	62	38.922	ENSHBUG00000022669	rab9a	82	38.922
ENSHBUG00000015126	rab42a	59	39.490	ENSHBUG00000014338	RAB41	73	39.490
ENSHBUG00000015126	rab42a	55	42.105	ENSHBUG00000001714	-	63	42.105
ENSHBUG00000015126	rab42a	62	43.902	ENSHBUG00000019261	si:dkey-16l2.16	77	43.902
ENSHBUG00000015126	rab42a	64	41.379	ENSHBUG00000007827	zgc:101559	74	41.379
ENSHBUG00000015126	rab42a	58	38.562	ENSHBUG00000003230	rab6bb	76	38.562
ENSHBUG00000015126	rab42a	70	40.860	ENSHBUG00000006056	-	86	40.860
ENSHBUG00000015126	rab42a	59	38.994	ENSHBUG00000014023	si:dkey-13a21.4	76	38.994
ENSHBUG00000015126	rab42a	63	34.940	ENSHBUG00000001462	RAB17	72	34.940
ENSHBUG00000015126	rab42a	61	35.802	ENSHBUG00000003752	rab5aa	74	35.802
ENSHBUG00000015126	rab42a	71	40.526	ENSHBUG00000008497	rab12	83	38.942
ENSHBUG00000015126	rab42a	65	43.353	ENSHBUG00000002397	-	81	43.353
ENSHBUG00000015126	rab42a	62	42.331	ENSHBUG00000017297	rab15	76	42.331
ENSHBUG00000015126	rab42a	62	44.242	ENSHBUG00000003876	rab25a	78	44.242
ENSHBUG00000015126	rab42a	72	32.487	ENSHBUG00000016064	rab34a	74	32.487
ENSHBUG00000015126	rab42a	61	34.337	ENSHBUG00000009014	-	79	34.337
ENSHBUG00000015126	rab42a	78	31.132	ENSHBUG00000009027	-	96	31.132
ENSHBUG00000015126	rab42a	80	35.211	ENSHBUG00000017620	-	98	35.211
ENSHBUG00000015126	rab42a	82	54.378	ENSHBUG00000003539	RAB39B	100	54.378
ENSHBUG00000015126	rab42a	62	36.585	ENSHBUG00000006823	-	73	36.585
ENSHBUG00000015126	rab42a	69	41.530	ENSHBUG00000009947	-	83	41.530
ENSHBUG00000015126	rab42a	68	41.111	ENSHBUG00000009320	rab25b	86	41.111
ENSHBUG00000015126	rab42a	59	32.278	ENSHBUG00000010964	rabl2	68	32.278
ENSHBUG00000015126	rab42a	70	33.333	ENSHBUG00000007788	rheb	94	33.333
ENSHBUG00000015126	rab42a	67	42.135	ENSHBUG00000010304	rab1ab	87	42.135
ENSHBUG00000015126	rab42a	62	31.138	ENSHBUG00000011397	si:cabz01085950.1	82	31.138
ENSHBUG00000015126	rab42a	77	38.537	ENSHBUG00000023035	rab11a	87	38.537
ENSHBUG00000015126	rab42a	62	41.818	ENSHBUG00000003696	rab18b	80	41.818
ENSHBUG00000015126	rab42a	59	39.490	ENSHBUG00000000890	rab6a	75	39.490
ENSHBUG00000015126	rab42a	69	41.530	ENSHBUG00000014777	rab11bb	83	41.530
ENSHBUG00000015126	rab42a	62	39.394	ENSHBUG00000001518	rab18a	80	39.394
ENSHBUG00000015126	rab42a	59	43.671	ENSHBUG00000013162	rab33ba	76	43.671
ENSHBUG00000015126	rab42a	60	44.375	ENSHBUG00000000993	rab30	72	44.375
ENSHBUG00000015126	rab42a	62	39.521	ENSHBUG00000001595	rab9b	74	39.521
ENSHBUG00000015126	rab42a	62	43.293	ENSHBUG00000001416	rab35b	80	43.293
ENSHBUG00000015126	rab42a	70	30.729	ENSHBUG00000013010	rab32b	87	30.729
ENSHBUG00000015126	rab42a	57	33.775	ENSHBUG00000013197	kras	86	32.927
ENSHBUG00000015126	rab42a	79	33.333	ENSHBUG00000012905	rab6ba	94	33.333
ENSHBUG00000015126	rab42a	64	42.012	ENSHBUG00000003728	-	84	42.012
ENSHBUG00000015126	rab42a	53	35.461	ENSHBUG00000007966	rab23	74	34.641
ENSHBUG00000015126	rab42a	62	35.976	ENSHBUG00000002014	rab5c	74	35.976
ENSHBUG00000015126	rab42a	82	55.300	ENSHBUG00000013570	-	100	55.300
ENSHBUG00000015126	rab42a	61	34.337	ENSHBUG00000010852	RAB7A	79	34.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015126	rab42a	82	96.330	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSHBUG00000015126	rab42a	82	97.248	ENSACIG00000003102	rab42a	100	97.248	Amphilophus_citrinellus
ENSHBUG00000015126	rab42a	89	94.915	ENSAOCG00000012921	rab42a	94	94.737	Amphiprion_ocellaris
ENSHBUG00000015126	rab42a	89	94.915	ENSAPEG00000007713	rab42a	94	94.737	Amphiprion_percula
ENSHBUG00000015126	rab42a	82	94.954	ENSATEG00000009052	rab42a	100	94.954	Anabas_testudineus
ENSHBUG00000015126	rab42a	82	100.000	ENSACLG00000007514	rab42a	100	100.000	Astatotilapia_calliptera
ENSHBUG00000015126	rab42a	82	91.705	ENSAMXG00000032729	rab42a	100	91.705	Astyanax_mexicanus
ENSHBUG00000015126	rab42a	82	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSHBUG00000015126	rab42a	82	91.244	ENSDARG00000034215	rab42a	100	91.244	Danio_rerio
ENSHBUG00000015126	rab42a	74	49.746	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSHBUG00000015126	rab42a	82	90.783	ENSELUG00000010345	rab42a	100	90.783	Esox_lucius
ENSHBUG00000015126	rab42a	82	95.413	ENSFHEG00000013106	rab42a	100	95.413	Fundulus_heteroclitus
ENSHBUG00000015126	rab42a	82	94.037	ENSGAFG00000002141	rab42a	100	94.037	Gambusia_affinis
ENSHBUG00000015126	rab42a	82	88.479	ENSIPUG00000011376	rab42a	100	88.479	Ictalurus_punctatus
ENSHBUG00000015126	rab42a	82	94.495	ENSKMAG00000007267	rab42a	100	94.495	Kryptolebias_marmoratus
ENSHBUG00000015126	rab42a	82	95.392	ENSLBEG00000001193	rab42a	100	95.392	Labrus_bergylta
ENSHBUG00000015126	rab42a	82	64.055	ENSLACG00000012755	-	100	64.055	Latimeria_chalumnae
ENSHBUG00000015126	rab42a	82	83.410	ENSLOCG00000003453	rab42a	100	83.410	Lepisosteus_oculatus
ENSHBUG00000015126	rab42a	82	50.917	ENSLOCG00000015825	-	99	50.917	Lepisosteus_oculatus
ENSHBUG00000015126	rab42a	82	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSHBUG00000015126	rab42a	100	100.000	ENSMZEG00005012460	rab42a	100	100.000	Maylandia_zebra
ENSHBUG00000015126	rab42a	82	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSHBUG00000015126	rab42a	100	98.872	ENSNBRG00000021487	rab42a	100	98.872	Neolamprologus_brichardi
ENSHBUG00000015126	rab42a	82	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSHBUG00000015126	rab42a	82	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSHBUG00000015126	rab42a	82	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSHBUG00000015126	rab42a	82	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSHBUG00000015126	rab42a	81	47.685	ENSPKIG00000015234	-	99	47.685	Paramormyrops_kingsleyae
ENSHBUG00000015126	rab42a	82	77.419	ENSPKIG00000021215	-	100	77.419	Paramormyrops_kingsleyae
ENSHBUG00000015126	rab42a	74	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSHBUG00000015126	rab42a	95	85.156	ENSPFOG00000004838	rab42a	96	85.156	Poecilia_formosa
ENSHBUG00000015126	rab42a	82	94.037	ENSPLAG00000005628	rab42a	100	94.037	Poecilia_latipinna
ENSHBUG00000015126	rab42a	82	93.578	ENSPMEG00000019497	rab42a	100	93.578	Poecilia_mexicana
ENSHBUG00000015126	rab42a	82	94.037	ENSPREG00000013962	rab42a	100	94.037	Poecilia_reticulata
ENSHBUG00000015126	rab42a	100	100.000	ENSPNYG00000010325	rab42a	100	100.000	Pundamilia_nyererei
ENSHBUG00000015126	rab42a	82	91.244	ENSPNAG00000016567	rab42a	100	91.244	Pygocentrus_nattereri
ENSHBUG00000015126	rab42a	82	85.714	ENSSFOG00015020732	rab42a	100	85.714	Scleropages_formosus
ENSHBUG00000015126	rab42a	82	46.330	ENSSFOG00015016000	-	97	46.330	Scleropages_formosus
ENSHBUG00000015126	rab42a	82	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSHBUG00000015126	rab42a	82	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSHBUG00000015126	rab42a	82	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSHBUG00000015126	rab42a	82	97.706	ENSSPAG00000016167	rab42a	100	97.706	Stegastes_partitus
ENSHBUG00000015126	rab42a	82	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSHBUG00000015126	rab42a	82	94.495	ENSXCOG00000003428	rab42a	100	94.495	Xiphophorus_couchianus
ENSHBUG00000015126	rab42a	82	94.495	ENSXMAG00000028376	rab42a	100	94.495	Xiphophorus_maculatus