EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000015515 (Gene tree)
Gene ID: 102309907
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2578 bases
Position: chrJH425371.1:979126-981703
Accession: 102309907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000013692	GTP_EFTU	PF00009.27	1.7e-53	1	1
ENSHBUP00000013692	MMR_HSR1	PF01926.23	1.8e-07	1	1
ENSHBUP00000013692	GTP_EFTU_D2	PF03144.25	1.8e-11	1	1
ENSHBUP00000013692	GTP_EFTU_D3	PF03143.17	8.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033057	-	2027	XM_005922529	ENSHBUP00000013692	456 (aa)	XP_005922591	UPI0003BCDBE6

Gene Model

Click here to download ENSHBUG00000015515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000015515	si:dkey-37o8.1	95	36.927	ENSHBUG00000001538	GSPT1	73	37.011
ENSHBUG00000015515	si:dkey-37o8.1	61	67.025	ENSHBUG00000017108	-	91	80.460
ENSHBUG00000015515	si:dkey-37o8.1	99	70.044	ENSHBUG00000001322	eef1a1b	91	70.044
ENSHBUG00000015515	si:dkey-37o8.1	96	38.864	ENSHBUG00000013424	hbs1l	62	38.462
ENSHBUG00000015515	si:dkey-37o8.1	97	72.235	ENSHBUG00000011690	EEF1A1	96	72.235
ENSHBUG00000015515	si:dkey-37o8.1	54	67.073	ENSHBUG00000017166	-	91	67.073
ENSHBUG00000015515	si:dkey-37o8.1	95	37.327	ENSHBUG00000006257	gspt1l	97	37.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015515	si:dkey-37o8.1	100	91.009	ENSAPOG00000016459	si:dkey-37o8.1	100	91.009	Acanthochromis_polyacanthus
ENSHBUG00000015515	si:dkey-37o8.1	99	90.929	ENSACIG00000020985	si:dkey-37o8.1	84	90.929	Amphilophus_citrinellus
ENSHBUG00000015515	si:dkey-37o8.1	100	92.341	ENSAOCG00000002663	si:dkey-37o8.1	100	92.341	Amphiprion_ocellaris
ENSHBUG00000015515	si:dkey-37o8.1	100	92.123	ENSAPEG00000012670	si:dkey-37o8.1	100	92.123	Amphiprion_percula
ENSHBUG00000015515	si:dkey-37o8.1	93	92.891	ENSATEG00000002217	si:dkey-37o8.1	99	92.891	Anabas_testudineus
ENSHBUG00000015515	si:dkey-37o8.1	100	99.781	ENSACLG00000003519	si:dkey-37o8.1	100	99.781	Astatotilapia_calliptera
ENSHBUG00000015515	si:dkey-37o8.1	100	84.716	ENSAMXG00000002728	si:dkey-37o8.1	100	84.716	Astyanax_mexicanus
ENSHBUG00000015515	si:dkey-37o8.1	96	75.399	ENSCPBG00000020570	-	87	75.399	Chrysemys_picta_bellii
ENSHBUG00000015515	si:dkey-37o8.1	100	85.153	ENSCSEG00000019807	si:dkey-37o8.1	100	84.449	Cynoglossus_semilaevis
ENSHBUG00000015515	si:dkey-37o8.1	98	89.062	ENSCVAG00000009828	si:dkey-37o8.1	98	89.062	Cyprinodon_variegatus
ENSHBUG00000015515	si:dkey-37o8.1	97	82.619	ENSDARG00000071727	si:dkey-37o8.1	92	82.619	Danio_rerio
ENSHBUG00000015515	si:dkey-37o8.1	100	83.624	ENSELUG00000007495	si:dkey-37o8.1	100	83.624	Esox_lucius
ENSHBUG00000015515	si:dkey-37o8.1	98	89.286	ENSFHEG00000017452	si:dkey-37o8.1	98	89.286	Fundulus_heteroclitus
ENSHBUG00000015515	si:dkey-37o8.1	97	79.684	ENSGMOG00000006122	si:dkey-37o8.1	98	79.684	Gadus_morhua
ENSHBUG00000015515	si:dkey-37o8.1	98	82.143	ENSGAFG00000000367	si:dkey-37o8.1	99	82.143	Gambusia_affinis
ENSHBUG00000015515	si:dkey-37o8.1	100	88.184	ENSGACG00000004505	si:dkey-37o8.1	100	88.184	Gasterosteus_aculeatus
ENSHBUG00000015515	si:dkey-37o8.1	96	75.399	ENSGAGG00000007724	-	94	75.399	Gopherus_agassizii
ENSHBUG00000015515	si:dkey-37o8.1	99	79.823	ENSHCOG00000001215	si:dkey-37o8.1	100	79.823	Hippocampus_comes
ENSHBUG00000015515	si:dkey-37o8.1	100	82.533	ENSIPUG00000004067	si:dkey-37o8.1	100	82.533	Ictalurus_punctatus
ENSHBUG00000015515	si:dkey-37o8.1	100	89.278	ENSKMAG00000015910	si:dkey-37o8.1	100	89.278	Kryptolebias_marmoratus
ENSHBUG00000015515	si:dkey-37o8.1	100	91.447	ENSLBEG00000021334	si:dkey-37o8.1	90	91.447	Labrus_bergylta
ENSHBUG00000015515	si:dkey-37o8.1	97	77.427	ENSLACG00000003948	si:dkey-37o8.1	96	77.427	Latimeria_chalumnae
ENSHBUG00000015515	si:dkey-37o8.1	98	82.103	ENSLOCG00000011245	si:dkey-37o8.1	97	82.103	Lepisosteus_oculatus
ENSHBUG00000015515	si:dkey-37o8.1	98	75.223	ENSMAMG00000009907	si:dkey-37o8.1	94	75.223	Mastacembelus_armatus
ENSHBUG00000015515	si:dkey-37o8.1	100	99.781	ENSMZEG00005018358	si:dkey-37o8.1	100	99.781	Maylandia_zebra
ENSHBUG00000015515	si:dkey-37o8.1	98	89.532	ENSMMOG00000004111	si:dkey-37o8.1	98	89.532	Mola_mola
ENSHBUG00000015515	si:dkey-37o8.1	96	82.192	ENSMALG00000017152	si:dkey-37o8.1	99	82.192	Monopterus_albus
ENSHBUG00000015515	si:dkey-37o8.1	100	99.342	ENSNBRG00000013552	si:dkey-37o8.1	100	99.342	Neolamprologus_brichardi
ENSHBUG00000015515	si:dkey-37o8.1	100	98.684	ENSONIG00000006165	si:dkey-37o8.1	100	98.684	Oreochromis_niloticus
ENSHBUG00000015515	si:dkey-37o8.1	100	90.570	ENSORLG00000019066	si:dkey-37o8.1	100	90.570	Oryzias_latipes
ENSHBUG00000015515	si:dkey-37o8.1	100	90.570	ENSORLG00020008094	si:dkey-37o8.1	100	90.570	Oryzias_latipes_hni
ENSHBUG00000015515	si:dkey-37o8.1	100	90.351	ENSORLG00015008410	si:dkey-37o8.1	100	90.351	Oryzias_latipes_hsok
ENSHBUG00000015515	si:dkey-37o8.1	100	89.912	ENSOMEG00000001868	si:dkey-37o8.1	100	89.912	Oryzias_melastigma
ENSHBUG00000015515	si:dkey-37o8.1	97	84.424	ENSPKIG00000017246	si:dkey-37o8.1	97	84.424	Paramormyrops_kingsleyae
ENSHBUG00000015515	si:dkey-37o8.1	58	68.015	ENSPSIG00000008080	-	96	68.015	Pelodiscus_sinensis
ENSHBUG00000015515	si:dkey-37o8.1	98	89.509	ENSPFOG00000013173	si:dkey-37o8.1	98	89.509	Poecilia_formosa
ENSHBUG00000015515	si:dkey-37o8.1	100	87.309	ENSPLAG00000010405	si:dkey-37o8.1	100	87.309	Poecilia_latipinna
ENSHBUG00000015515	si:dkey-37o8.1	98	89.732	ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	Poecilia_mexicana
ENSHBUG00000015515	si:dkey-37o8.1	98	89.213	ENSPREG00000006280	si:dkey-37o8.1	98	89.213	Poecilia_reticulata
ENSHBUG00000015515	si:dkey-37o8.1	100	99.123	ENSPNYG00000002059	si:dkey-37o8.1	100	99.123	Pundamilia_nyererei
ENSHBUG00000015515	si:dkey-37o8.1	100	84.279	ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	Pygocentrus_nattereri
ENSHBUG00000015515	si:dkey-37o8.1	98	83.036	ENSSFOG00015019070	si:dkey-37o8.1	98	83.036	Scleropages_formosus
ENSHBUG00000015515	si:dkey-37o8.1	100	92.325	ENSSMAG00000016143	si:dkey-37o8.1	100	92.325	Scophthalmus_maximus
ENSHBUG00000015515	si:dkey-37o8.1	100	91.685	ENSSDUG00000009163	si:dkey-37o8.1	100	91.685	Seriola_dumerili
ENSHBUG00000015515	si:dkey-37o8.1	100	91.466	ENSSLDG00000023761	si:dkey-37o8.1	100	91.466	Seriola_lalandi_dorsalis
ENSHBUG00000015515	si:dkey-37o8.1	99	71.397	ENSSPUG00000007467	-	99	71.397	Sphenodon_punctatus
ENSHBUG00000015515	si:dkey-37o8.1	100	91.685	ENSSPAG00000013856	si:dkey-37o8.1	100	91.685	Stegastes_partitus
ENSHBUG00000015515	si:dkey-37o8.1	99	90.508	ENSTRUG00000009006	si:dkey-37o8.1	100	90.508	Takifugu_rubripes
ENSHBUG00000015515	si:dkey-37o8.1	99	90.989	ENSTNIG00000017138	si:dkey-37o8.1	98	90.989	Tetraodon_nigroviridis
ENSHBUG00000015515	si:dkey-37o8.1	96	75.626	ENSXETG00000017744	42Sp50	96	75.000	Xenopus_tropicalis
ENSHBUG00000015515	si:dkey-37o8.1	98	89.663	ENSXCOG00000012296	si:dkey-37o8.1	98	89.663	Xiphophorus_couchianus
ENSHBUG00000015515	si:dkey-37o8.1	98	89.732	ENSXMAG00000001998	si:dkey-37o8.1	98	89.732	Xiphophorus_maculatus