EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000015600 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 5336 bases
Position: chrJH425773.1:239736-245071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000013790	RRM_1	PF00076.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033094	-	312	-	ENSHBUP00000013790	103 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000015600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000015600	-	56	57.377	ENSHBUG00000012462	srsf5b	70	45.545
ENSHBUG00000015600	-	67	43.478	ENSHBUG00000003073	srsf3b	54	43.478
ENSHBUG00000015600	-	92	57.037	ENSHBUG00000015576	-	52	61.832
ENSHBUG00000015600	-	91	67.500	ENSHBUG00000016788	srsf1a	51	68.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015600	-	92	59.690	ENSACIG00000002623	-	65	64.800	Amphilophus_citrinellus
ENSHBUG00000015600	-	93	56.204	ENSACLG00000021693	-	53	61.364	Astatotilapia_calliptera
ENSHBUG00000015600	-	86	52.475	ENSCSAVG00000006093	-	51	52.475	Ciona_savignyi
ENSHBUG00000015600	-	90	62.712	ENSEBUG00000009582	-	51	62.712	Eptatretus_burgeri
ENSHBUG00000015600	-	93	59.690	ENSFHEG00000017425	-	67	60.156	Fundulus_heteroclitus
ENSHBUG00000015600	-	93	66.667	ENSGMOG00000010606	-	65	68.033	Gadus_morhua
ENSHBUG00000015600	-	93	59.231	ENSGAFG00000000609	-	52	59.690	Gambusia_affinis
ENSHBUG00000015600	-	92	67.213	ENSGACG00000011094	-	65	68.595	Gasterosteus_aculeatus
ENSHBUG00000015600	-	53	63.768	ENSHGLG00100018821	-	59	63.768	Heterocephalus_glaber_male
ENSHBUG00000015600	-	95	72.269	ENSHCOG00000008016	-	50	72.269	Hippocampus_comes
ENSHBUG00000015600	-	92	57.463	ENSMZEG00005019071	-	68	62.308	Maylandia_zebra
ENSHBUG00000015600	-	93	61.600	ENSMMOG00000018849	-	50	62.097	Mola_mola
ENSHBUG00000015600	-	50	69.231	ENSMALG00000007784	-	100	69.231	Monopterus_albus
ENSHBUG00000015600	-	92	69.828	ENSNBRG00000008134	-	51	61.364	Neolamprologus_brichardi
ENSHBUG00000015600	-	95	53.279	ENSOPRG00000004745	-	73	53.279	Ochotona_princeps
ENSHBUG00000015600	-	95	55.000	ENSONIG00000004857	-	53	60.902	Oreochromis_niloticus
ENSHBUG00000015600	-	65	38.272	ENSOCUG00000026856	-	70	38.333	Oryctolagus_cuniculus
ENSHBUG00000015600	-	92	60.465	ENSORLG00000005314	-	50	65.600	Oryzias_latipes
ENSHBUG00000015600	-	92	60.465	ENSORLG00015015497	-	50	65.600	Oryzias_latipes_hsok
ENSHBUG00000015600	-	92	58.209	ENSOMEG00000017711	-	51	63.077	Oryzias_melastigma
ENSHBUG00000015600	-	56	73.611	ENSPTIG00000002141	-	99	73.611	Panthera_tigris_altaica
ENSHBUG00000015600	-	92	66.393	ENSPLAG00000019553	-	61	67.769	Poecilia_latipinna
ENSHBUG00000015600	-	93	60.156	ENSPREG00000016792	-	51	60.630	Poecilia_reticulata
ENSHBUG00000015600	-	92	56.618	ENSPNYG00000020651	-	51	61.364	Pundamilia_nyererei
ENSHBUG00000015600	-	95	59.859	ENSSDUG00000003887	-	54	59.859	Seriola_dumerili
ENSHBUG00000015600	-	91	65.254	ENSTRUG00000017058	-	50	65.254	Takifugu_rubripes
ENSHBUG00000015600	-	95	59.836	ENSTNIG00000009993	-	50	61.864	Tetraodon_nigroviridis
ENSHBUG00000015600	-	92	66.087	ENSXCOG00000017888	-	51	60.156	Xiphophorus_couchianus
ENSHBUG00000015600	-	93	59.690	ENSXMAG00000010797	-	51	60.156	Xiphophorus_maculatus