EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000015943 (Gene tree)
Gene ID: 102299585
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9020 bases
Position: chrJH425420.1:336711-345730
Accession: 102299585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014115	HRDC	PF00570.23	7.6e-15	1	1
ENSHBUP00000014122	HRDC	PF00570.23	7.9e-15	1	1
ENSHBUP00000014115	BDHCT	PF08072.11	9.9e-19	1	1
ENSHBUP00000014122	BDHCT	PF08072.11	1e-18	1	1
ENSHBUP00000014115	DEAD	PF00270.29	3.6e-18	1	1
ENSHBUP00000014122	DEAD	PF00270.29	3.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022025	-	4831	XM_005928687	ENSHBUP00000014122	1405 (aa)	XP_005928749	UPI0006C945D4
ENSHBUT00000022059	-	4741	XM_014335619	ENSHBUP00000014115	1375 (aa)	XP_014191105	UPI0006C9AE6E

Gene Model

Click here to download ENSHBUG00000015943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015943	blm	60	62.954	ENSG00000197299	BLM	87	69.485	Homo_sapiens
ENSHBUG00000015943	blm	100	75.736	ENSAPOG00000017966	blm	100	76.508	Acanthochromis_polyacanthus
ENSHBUG00000015943	blm	85	64.160	ENSAMEG00000013843	BLM	84	64.268	Ailuropoda_melanoleuca
ENSHBUG00000015943	blm	100	85.816	ENSACIG00000023762	blm	100	85.724	Amphilophus_citrinellus
ENSHBUG00000015943	blm	100	76.272	ENSAOCG00000003318	blm	100	77.204	Amphiprion_ocellaris
ENSHBUG00000015943	blm	100	76.491	ENSAPEG00000018105	blm	100	77.333	Amphiprion_percula
ENSHBUG00000015943	blm	99	76.643	ENSATEG00000006421	blm	100	76.224	Anabas_testudineus
ENSHBUG00000015943	blm	81	51.551	ENSAPLG00000006878	BLM	71	62.369	Anas_platyrhynchos
ENSHBUG00000015943	blm	60	66.204	ENSACAG00000014275	BLM	84	66.117	Anolis_carolinensis
ENSHBUG00000015943	blm	60	63.270	ENSANAG00000038415	BLM	87	69.613	Aotus_nancymaae
ENSHBUG00000015943	blm	100	98.294	ENSACLG00000020354	blm	100	98.294	Astatotilapia_calliptera
ENSHBUG00000015943	blm	99	58.029	ENSAMXG00000016970	blm	99	58.236	Astyanax_mexicanus
ENSHBUG00000015943	blm	80	72.664	ENSBTAG00000020301	BLM	86	72.664	Bos_taurus
ENSHBUG00000015943	blm	60	63.464	ENSCJAG00000009803	BLM	87	69.669	Callithrix_jacchus
ENSHBUG00000015943	blm	85	64.766	ENSCAFG00000012385	BLM	83	64.892	Canis_familiaris
ENSHBUG00000015943	blm	85	64.766	ENSCAFG00020016111	BLM	83	74.227	Canis_lupus_dingo
ENSHBUG00000015943	blm	56	72.664	ENSCHIG00000010329	BLM	86	72.664	Capra_hircus
ENSHBUG00000015943	blm	88	63.195	ENSTSYG00000012368	BLM	87	68.934	Carlito_syrichta
ENSHBUG00000015943	blm	54	72.283	ENSCAPG00000017976	BLM	67	72.283	Cavia_aperea
ENSHBUG00000015943	blm	63	62.932	ENSCPOG00000001761	BLM	88	62.919	Cavia_porcellus
ENSHBUG00000015943	blm	60	63.077	ENSCCAG00000023069	BLM	87	69.669	Cebus_capucinus
ENSHBUG00000015943	blm	60	63.357	ENSCATG00000040609	BLM	90	68.681	Cercocebus_atys
ENSHBUG00000015943	blm	60	63.152	ENSCSAG00000017040	BLM	88	63.239	Chlorocebus_sabaeus
ENSHBUG00000015943	blm	50	60.185	ENSCHOG00000006255	BLM	50	60.185	Choloepus_hoffmanni
ENSHBUG00000015943	blm	91	49.924	ENSCPBG00000025000	BLM	99	52.591	Chrysemys_picta_bellii
ENSHBUG00000015943	blm	75	55.451	ENSCGRG00001024897	Blm	60	63.282	Cricetulus_griseus_chok1gshd
ENSHBUG00000015943	blm	95	67.667	ENSCSEG00000013483	blm	99	67.442	Cynoglossus_semilaevis
ENSHBUG00000015943	blm	77	72.340	ENSCVAG00000017583	blm	95	77.841	Cyprinodon_variegatus
ENSHBUG00000015943	blm	99	58.018	ENSDARG00000077089	blm	100	57.793	Danio_rerio
ENSHBUG00000015943	blm	75	54.664	ENSDORG00000011033	Blm	80	63.680	Dipodomys_ordii
ENSHBUG00000015943	blm	57	53.488	ENSETEG00000015019	BLM	62	53.488	Echinops_telfairi
ENSHBUG00000015943	blm	88	59.382	ENSEASG00005006727	BLM	88	59.857	Equus_asinus_asinus
ENSHBUG00000015943	blm	87	62.827	ENSECAG00000011405	BLM	87	63.302	Equus_caballus
ENSHBUG00000015943	blm	79	61.439	ENSEEUG00000001434	BLM	86	61.439	Erinaceus_europaeus
ENSHBUG00000015943	blm	99	59.906	ENSELUG00000019098	blm	99	58.890	Esox_lucius
ENSHBUG00000015943	blm	64	65.157	ENSFCAG00000006087	BLM	82	74.433	Felis_catus
ENSHBUG00000015943	blm	75	54.213	ENSFALG00000010981	BLM	77	63.282	Ficedula_albicollis
ENSHBUG00000015943	blm	83	66.516	ENSFDAG00000012658	BLM	87	66.516	Fukomys_damarensis
ENSHBUG00000015943	blm	100	70.681	ENSFHEG00000002553	blm	100	70.516	Fundulus_heteroclitus
ENSHBUG00000015943	blm	99	60.028	ENSGMOG00000016431	blm	98	70.513	Gadus_morhua
ENSHBUG00000015943	blm	82	52.492	ENSGALG00000008256	BLM	100	46.966	Gallus_gallus
ENSHBUG00000015943	blm	96	81.081	ENSGAFG00000001117	blm	100	81.081	Gambusia_affinis
ENSHBUG00000015943	blm	99	70.576	ENSGACG00000010863	blm	100	88.636	Gasterosteus_aculeatus
ENSHBUG00000015943	blm	51	70.847	ENSGAGG00000005383	BLM	81	70.847	Gopherus_agassizii
ENSHBUG00000015943	blm	60	63.158	ENSGGOG00000007710	BLM	90	68.407	Gorilla_gorilla
ENSHBUG00000015943	blm	88	62.768	ENSHGLG00000013231	BLM	87	62.515	Heterocephalus_glaber_female
ENSHBUG00000015943	blm	75	71.251	ENSHCOG00000011455	blm	100	71.209	Hippocampus_comes
ENSHBUG00000015943	blm	75	63.324	ENSIPUG00000000529	blm	83	68.578	Ictalurus_punctatus
ENSHBUG00000015943	blm	65	62.057	ENSSTOG00000005000	BLM	89	62.175	Ictidomys_tridecemlineatus
ENSHBUG00000015943	blm	53	69.731	ENSJJAG00000016322	Blm	73	71.729	Jaculus_jaculus
ENSHBUG00000015943	blm	100	75.645	ENSKMAG00000016608	blm	100	75.788	Kryptolebias_marmoratus
ENSHBUG00000015943	blm	60	83.293	ENSLBEG00000018729	blm	96	83.639	Labrus_bergylta
ENSHBUG00000015943	blm	60	66.232	ENSLACG00000006490	BLM	58	66.114	Latimeria_chalumnae
ENSHBUG00000015943	blm	99	53.370	ENSLOCG00000014302	blm	100	53.562	Lepisosteus_oculatus
ENSHBUG00000015943	blm	60	63.357	ENSMFAG00000042982	BLM	90	68.681	Macaca_fascicularis
ENSHBUG00000015943	blm	60	63.357	ENSMMUG00000019526	BLM	90	68.681	Macaca_mulatta
ENSHBUG00000015943	blm	60	63.239	ENSMNEG00000031251	BLM	90	68.407	Macaca_nemestrina
ENSHBUG00000015943	blm	60	60.024	ENSMLEG00000032934	BLM	88	60.024	Mandrillus_leucophaeus
ENSHBUG00000015943	blm	99	75.666	ENSMAMG00000008726	blm	99	75.775	Mastacembelus_armatus
ENSHBUG00000015943	blm	100	96.014	ENSMZEG00005022323	blm	100	96.014	Maylandia_zebra
ENSHBUG00000015943	blm	60	62.456	ENSMAUG00000008953	Blm	88	63.059	Mesocricetus_auratus
ENSHBUG00000015943	blm	99	46.092	ENSMICG00000034442	BLM	50	74.639	Microcebus_murinus
ENSHBUG00000015943	blm	59	64.053	ENSMOCG00000016367	Blm	59	64.217	Microtus_ochrogaster
ENSHBUG00000015943	blm	100	74.087	ENSMMOG00000006959	blm	100	73.711	Mola_mola
ENSHBUG00000015943	blm	100	75.874	ENSMALG00000007323	blm	100	76.160	Monopterus_albus
ENSHBUG00000015943	blm	60	62.588	MGP_CAROLIEiJ_G0029907	Blm	59	62.251	Mus_caroli
ENSHBUG00000015943	blm	60	62.941	ENSMUSG00000030528	Blm	59	62.266	Mus_musculus
ENSHBUG00000015943	blm	60	62.500	MGP_PahariEiJ_G0013129	Blm	59	62.500	Mus_pahari
ENSHBUG00000015943	blm	60	62.824	MGP_SPRETEiJ_G0031009	Blm	59	62.310	Mus_spretus
ENSHBUG00000015943	blm	72	67.047	ENSMPUG00000015657	BLM	84	67.047	Mustela_putorius_furo
ENSHBUG00000015943	blm	88	62.397	ENSMLUG00000014697	BLM	88	62.397	Myotis_lucifugus
ENSHBUG00000015943	blm	88	62.545	ENSNGAG00000001275	Blm	88	62.545	Nannospalax_galili
ENSHBUG00000015943	blm	100	94.904	ENSNBRG00000019702	blm	100	94.904	Neolamprologus_brichardi
ENSHBUG00000015943	blm	60	61.183	ENSNLEG00000012087	BLM	80	59.504	Nomascus_leucogenys
ENSHBUG00000015943	blm	68	58.504	ENSMEUG00000007253	BLM	88	58.384	Notamacropus_eugenii
ENSHBUG00000015943	blm	52	65.331	ENSOPRG00000011667	BLM	51	64.917	Ochotona_princeps
ENSHBUG00000015943	blm	60	58.443	ENSODEG00000015373	BLM	80	58.293	Octodon_degus
ENSHBUG00000015943	blm	100	92.356	ENSONIG00000015193	blm	100	92.356	Oreochromis_niloticus
ENSHBUG00000015943	blm	55	65.894	ENSOANG00000009316	-	100	65.681	Ornithorhynchus_anatinus
ENSHBUG00000015943	blm	70	61.859	ENSOCUG00000013969	BLM	88	61.859	Oryctolagus_cuniculus
ENSHBUG00000015943	blm	100	73.449	ENSORLG00000008110	blm	100	73.449	Oryzias_latipes
ENSHBUG00000015943	blm	100	73.232	ENSORLG00020004812	blm	100	73.232	Oryzias_latipes_hni
ENSHBUG00000015943	blm	100	73.304	ENSORLG00015018640	blm	100	77.057	Oryzias_latipes_hsok
ENSHBUG00000015943	blm	100	73.041	ENSOMEG00000023545	blm	100	73.055	Oryzias_melastigma
ENSHBUG00000015943	blm	67	61.013	ENSOGAG00000005708	BLM	88	60.777	Otolemur_garnettii
ENSHBUG00000015943	blm	60	62.604	ENSOARG00000012875	BLM	59	62.515	Ovis_aries
ENSHBUG00000015943	blm	60	63.392	ENSPPAG00000032173	BLM	87	70.037	Pan_paniscus
ENSHBUG00000015943	blm	57	65.025	ENSPPRG00000002471	BLM	82	74.433	Panthera_pardus
ENSHBUG00000015943	blm	57	64.268	ENSPTIG00000016168	BLM	82	73.320	Panthera_tigris_altaica
ENSHBUG00000015943	blm	60	62.529	ENSPTRG00000007460	BLM	82	75.413	Pan_troglodytes
ENSHBUG00000015943	blm	60	63.357	ENSPANG00000018572	BLM	90	68.681	Papio_anubis
ENSHBUG00000015943	blm	99	55.646	ENSPKIG00000008954	blm	87	73.634	Paramormyrops_kingsleyae
ENSHBUG00000015943	blm	71	70.385	ENSPMGG00000006629	blm	100	71.007	Periophthalmus_magnuspinnatus
ENSHBUG00000015943	blm	60	63.059	ENSPEMG00000017348	Blm	59	63.108	Peromyscus_maniculatus_bairdii
ENSHBUG00000015943	blm	83	50.329	ENSPCIG00000006609	BLM	58	62.441	Phascolarctos_cinereus
ENSHBUG00000015943	blm	100	71.285	ENSPFOG00000005059	blm	100	71.213	Poecilia_formosa
ENSHBUG00000015943	blm	100	71.213	ENSPLAG00000017344	blm	100	71.357	Poecilia_latipinna
ENSHBUG00000015943	blm	100	71.121	ENSPMEG00000000321	blm	100	70.977	Poecilia_mexicana
ENSHBUG00000015943	blm	100	71.357	ENSPREG00000007715	blm	100	71.141	Poecilia_reticulata
ENSHBUG00000015943	blm	60	62.559	ENSPPYG00000006784	BLM	88	62.411	Pongo_abelii
ENSHBUG00000015943	blm	60	60.808	ENSPCAG00000008960	BLM	59	60.308	Procavia_capensis
ENSHBUG00000015943	blm	68	53.714	ENSPCOG00000000439	BLM	88	55.201	Propithecus_coquereli
ENSHBUG00000015943	blm	73	78.073	ENSPVAG00000011642	BLM	70	78.073	Pteropus_vampyrus
ENSHBUG00000015943	blm	100	89.993	ENSPNYG00000010956	blm	100	89.993	Pundamilia_nyererei
ENSHBUG00000015943	blm	100	57.960	ENSPNAG00000011714	blm	100	58.570	Pygocentrus_nattereri
ENSHBUG00000015943	blm	99	45.833	ENSRNOG00000011213	Blm	60	62.396	Rattus_norvegicus
ENSHBUG00000015943	blm	60	62.884	ENSRBIG00000029656	BLM	90	68.407	Rhinopithecus_bieti
ENSHBUG00000015943	blm	60	62.884	ENSRROG00000037871	BLM	90	68.407	Rhinopithecus_roxellana
ENSHBUG00000015943	blm	50	69.118	ENSSBOG00000030957	BLM	55	69.118	Saimiri_boliviensis_boliviensis
ENSHBUG00000015943	blm	88	62.676	ENSSHAG00000007988	BLM	86	63.090	Sarcophilus_harrisii
ENSHBUG00000015943	blm	67	71.798	ENSSFOG00015015462	blm	86	71.530	Scleropages_formosus
ENSHBUG00000015943	blm	100	74.337	ENSSMAG00000001120	blm	100	74.767	Scophthalmus_maximus
ENSHBUG00000015943	blm	100	76.857	ENSSDUG00000010955	blm	100	77.000	Seriola_dumerili
ENSHBUG00000015943	blm	100	76.929	ENSSLDG00000000634	blm	100	76.786	Seriola_lalandi_dorsalis
ENSHBUG00000015943	blm	60	58.264	ENSSARG00000006398	BLM	63	57.688	Sorex_araneus
ENSHBUG00000015943	blm	76	53.389	ENSSPUG00000000013	BLM	74	61.659	Sphenodon_punctatus
ENSHBUG00000015943	blm	99	78.662	ENSSPAG00000013999	blm	99	78.592	Stegastes_partitus
ENSHBUG00000015943	blm	88	63.905	ENSSSCG00000001816	BLM	87	66.074	Sus_scrofa
ENSHBUG00000015943	blm	80	47.694	ENSTGUG00000009959	-	83	56.579	Taeniopygia_guttata
ENSHBUG00000015943	blm	99	70.050	ENSTRUG00000019860	blm	99	69.906	Takifugu_rubripes
ENSHBUG00000015943	blm	99	67.205	ENSTNIG00000019246	blm	99	67.065	Tetraodon_nigroviridis
ENSHBUG00000015943	blm	56	66.197	ENSTTRG00000016386	BLM	55	65.897	Tursiops_truncatus
ENSHBUG00000015943	blm	85	64.848	ENSUMAG00000009105	BLM	96	66.893	Ursus_maritimus
ENSHBUG00000015943	blm	75	51.685	ENSVPAG00000000085	BLM	88	59.215	Vicugna_pacos
ENSHBUG00000015943	blm	77	78.320	ENSVVUG00000006402	BLM	82	78.320	Vulpes_vulpes
ENSHBUG00000015943	blm	99	46.829	ENSXETG00000007847	blm	55	66.539	Xenopus_tropicalis
ENSHBUG00000015943	blm	100	69.550	ENSXCOG00000020227	blm	100	69.480	Xiphophorus_couchianus
ENSHBUG00000015943	blm	100	71.828	ENSXMAG00000002951	blm	100	71.644	Xiphophorus_maculatus