EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000015960 (Gene tree)
Gene ID: 102289206
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3311 bases
Position: chrJH425439.1:467358-470668
Accession: 102289206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014136	MRP-S32	PF10210.9	2.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022048	-	611	XM_005930411	ENSHBUP00000014136	144 (aa)	XP_005930473	UPI0003BDA09D

Gene Model

Click here to download ENSHBUG00000015960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015960	mrpl42	100	80.137	ENSAPOG00000010677	mrpl42	100	80.137	Acanthochromis_polyacanthus
ENSHBUG00000015960	mrpl42	100	80.690	ENSAOCG00000011620	mrpl42	100	80.690	Amphiprion_ocellaris
ENSHBUG00000015960	mrpl42	100	81.379	ENSAPEG00000019516	mrpl42	100	81.379	Amphiprion_percula
ENSHBUG00000015960	mrpl42	90	80.153	ENSATEG00000014106	mrpl42	100	80.153	Anabas_testudineus
ENSHBUG00000015960	mrpl42	100	54.483	ENSACAG00000012606	MRPL42	99	54.483	Anolis_carolinensis
ENSHBUG00000015960	mrpl42	100	98.611	ENSACLG00000026856	mrpl42	100	98.611	Astatotilapia_calliptera
ENSHBUG00000015960	mrpl42	85	45.736	ENSAMXG00000035149	mrpl42	94	45.736	Astyanax_mexicanus
ENSHBUG00000015960	mrpl42	99	64.336	ENSCSEG00000010067	mrpl42	98	64.336	Cynoglossus_semilaevis
ENSHBUG00000015960	mrpl42	100	73.793	ENSCVAG00000002612	mrpl42	100	73.793	Cyprinodon_variegatus
ENSHBUG00000015960	mrpl42	100	53.793	ENSDARG00000079391	mrpl42	100	53.793	Danio_rerio
ENSHBUG00000015960	mrpl42	70	44.444	ENSEBUG00000005581	mrpl42	81	44.444	Eptatretus_burgeri
ENSHBUG00000015960	mrpl42	99	61.111	ENSELUG00000001973	mrpl42	99	61.111	Esox_lucius
ENSHBUG00000015960	mrpl42	100	73.103	ENSFHEG00000018696	mrpl42	100	73.103	Fundulus_heteroclitus
ENSHBUG00000015960	mrpl42	66	78.125	ENSGMOG00000002972	mrpl42	99	78.125	Gadus_morhua
ENSHBUG00000015960	mrpl42	100	73.793	ENSGAFG00000018373	mrpl42	100	73.793	Gambusia_affinis
ENSHBUG00000015960	mrpl42	67	80.412	ENSGACG00000018811	mrpl42	100	80.412	Gasterosteus_aculeatus
ENSHBUG00000015960	mrpl42	100	65.753	ENSHCOG00000014046	mrpl42	100	65.753	Hippocampus_comes
ENSHBUG00000015960	mrpl42	83	52.419	ENSIPUG00000015395	mrpl42	84	52.419	Ictalurus_punctatus
ENSHBUG00000015960	mrpl42	100	68.276	ENSKMAG00000013671	mrpl42	100	68.276	Kryptolebias_marmoratus
ENSHBUG00000015960	mrpl42	100	70.345	ENSLBEG00000028618	mrpl42	99	70.345	Labrus_bergylta
ENSHBUG00000015960	mrpl42	100	75.172	ENSMAMG00000009737	mrpl42	100	75.172	Mastacembelus_armatus
ENSHBUG00000015960	mrpl42	100	98.611	ENSMZEG00005008545	mrpl42	96	98.611	Maylandia_zebra
ENSHBUG00000015960	mrpl42	74	73.832	ENSMMOG00000002317	mrpl42	70	73.832	Mola_mola
ENSHBUG00000015960	mrpl42	100	67.097	ENSMALG00000015794	mrpl42	96	67.097	Monopterus_albus
ENSHBUG00000015960	mrpl42	100	96.528	ENSNBRG00000003307	mrpl42	100	96.528	Neolamprologus_brichardi
ENSHBUG00000015960	mrpl42	100	98.611	ENSONIG00000011753	mrpl42	100	98.611	Oreochromis_niloticus
ENSHBUG00000015960	mrpl42	93	48.889	ENSOANG00000019984	-	92	48.889	Ornithorhynchus_anatinus
ENSHBUG00000015960	mrpl42	100	68.276	ENSORLG00000013500	mrpl42	85	68.276	Oryzias_latipes
ENSHBUG00000015960	mrpl42	100	70.345	ENSORLG00020000548	mrpl42	100	70.345	Oryzias_latipes_hni
ENSHBUG00000015960	mrpl42	100	68.750	ENSORLG00015016984	mrpl42	100	68.750	Oryzias_latipes_hsok
ENSHBUG00000015960	mrpl42	100	70.345	ENSOMEG00000010700	mrpl42	100	70.345	Oryzias_melastigma
ENSHBUG00000015960	mrpl42	100	59.459	ENSPKIG00000025457	mrpl42	100	59.459	Paramormyrops_kingsleyae
ENSHBUG00000015960	mrpl42	69	74.257	ENSPMGG00000019705	mrpl42	71	74.257	Periophthalmus_magnuspinnatus
ENSHBUG00000015960	mrpl42	70	52.381	ENSPMAG00000008091	mrpl42	68	52.381	Petromyzon_marinus
ENSHBUG00000015960	mrpl42	100	73.793	ENSPFOG00000016539	mrpl42	99	73.793	Poecilia_formosa
ENSHBUG00000015960	mrpl42	100	73.103	ENSPLAG00000001255	mrpl42	100	73.103	Poecilia_latipinna
ENSHBUG00000015960	mrpl42	100	73.793	ENSPMEG00000016462	mrpl42	100	73.793	Poecilia_mexicana
ENSHBUG00000015960	mrpl42	82	72.269	ENSPREG00000012053	mrpl42	87	72.269	Poecilia_reticulata
ENSHBUG00000015960	mrpl42	100	98.611	ENSPNYG00000009586	mrpl42	100	98.611	Pundamilia_nyererei
ENSHBUG00000015960	mrpl42	98	51.408	ENSPNAG00000020753	mrpl42	97	51.408	Pygocentrus_nattereri
ENSHBUG00000015960	mrpl42	100	75.172	ENSSMAG00000000262	mrpl42	100	75.172	Scophthalmus_maximus
ENSHBUG00000015960	mrpl42	100	78.621	ENSSDUG00000005949	mrpl42	100	78.621	Seriola_dumerili
ENSHBUG00000015960	mrpl42	100	78.621	ENSSLDG00000010159	mrpl42	100	78.621	Seriola_lalandi_dorsalis
ENSHBUG00000015960	mrpl42	100	71.724	ENSTRUG00000025949	mrpl42	99	71.724	Takifugu_rubripes
ENSHBUG00000015960	mrpl42	70	60.396	ENSXETG00000032902	mrpl42	82	60.396	Xenopus_tropicalis
ENSHBUG00000015960	mrpl42	100	65.753	ENSXCOG00000013875	mrpl42	98	65.753	Xiphophorus_couchianus