EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000015966 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 20283 bases
Position: chrJH425527.1:187250-207532
Accession: 102292288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014111	RRM_1	PF00076.22	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033242	-	1383	XM_014338158	ENSHBUP00000014111	461 (aa)	XP_014193644	-

Gene Model

Click here to download ENSHBUG00000015966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000015966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000015966	rnpc3	82	78.947	ENSG00000185946	RNPC3	78	78.947	Homo_sapiens
ENSHBUG00000015966	rnpc3	85	83.106	ENSAPOG00000017371	rnpc3	82	81.250	Acanthochromis_polyacanthus
ENSHBUG00000015966	rnpc3	82	78.947	ENSAMEG00000001694	RNPC3	78	78.947	Ailuropoda_melanoleuca
ENSHBUG00000015966	rnpc3	85	89.796	ENSACIG00000021043	rnpc3	86	89.796	Amphilophus_citrinellus
ENSHBUG00000015966	rnpc3	85	81.551	ENSAOCG00000014052	rnpc3	81	79.412	Amphiprion_ocellaris
ENSHBUG00000015966	rnpc3	85	81.283	ENSAPEG00000008739	rnpc3	81	79.167	Amphiprion_percula
ENSHBUG00000015966	rnpc3	85	81.250	ENSATEG00000021263	rnpc3	82	81.250	Anabas_testudineus
ENSHBUG00000015966	rnpc3	74	51.771	ENSAPLG00000015605	RNPC3	81	53.678	Anas_platyrhynchos
ENSHBUG00000015966	rnpc3	81	66.667	ENSACAG00000002029	RNPC3	78	66.667	Anolis_carolinensis
ENSHBUG00000015966	rnpc3	82	78.947	ENSANAG00000019950	RNPC3	78	78.947	Aotus_nancymaae
ENSHBUG00000015966	rnpc3	85	100.000	ENSACLG00000014702	rnpc3	82	100.000	Astatotilapia_calliptera
ENSHBUG00000015966	rnpc3	85	66.667	ENSAMXG00000033372	rnpc3	82	66.125	Astyanax_mexicanus
ENSHBUG00000015966	rnpc3	82	78.947	ENSBTAG00000019091	RNPC3	78	78.947	Bos_taurus
ENSHBUG00000015966	rnpc3	82	78.947	ENSCJAG00000035686	RNPC3	78	78.947	Callithrix_jacchus
ENSHBUG00000015966	rnpc3	82	78.947	ENSCAFG00000019972	RNPC3	78	78.947	Canis_familiaris
ENSHBUG00000015966	rnpc3	82	78.947	ENSCAFG00020011300	RNPC3	78	78.947	Canis_lupus_dingo
ENSHBUG00000015966	rnpc3	82	78.947	ENSCHIG00000020361	RNPC3	79	78.378	Capra_hircus
ENSHBUG00000015966	rnpc3	82	81.579	ENSTSYG00000030256	RNPC3	78	81.579	Carlito_syrichta
ENSHBUG00000015966	rnpc3	72	44.789	ENSCAPG00000013600	RNPC3	78	45.481	Cavia_aperea
ENSHBUG00000015966	rnpc3	82	78.947	ENSCPOG00000031638	RNPC3	78	78.947	Cavia_porcellus
ENSHBUG00000015966	rnpc3	82	78.947	ENSCCAG00000024301	RNPC3	78	78.947	Cebus_capucinus
ENSHBUG00000015966	rnpc3	82	78.947	ENSCATG00000002086	RNPC3	78	78.947	Cercocebus_atys
ENSHBUG00000015966	rnpc3	73	46.281	ENSCATG00000035930	-	75	46.398	Cercocebus_atys
ENSHBUG00000015966	rnpc3	82	76.316	ENSCLAG00000005169	RNPC3	78	76.316	Chinchilla_lanigera
ENSHBUG00000015966	rnpc3	82	78.947	ENSCSAG00000001519	RNPC3	78	78.947	Chlorocebus_sabaeus
ENSHBUG00000015966	rnpc3	82	69.231	ENSCPBG00000028311	RNPC3	78	69.231	Chrysemys_picta_bellii
ENSHBUG00000015966	rnpc3	82	76.316	ENSCANG00000031444	RNPC3	78	76.316	Colobus_angolensis_palliatus
ENSHBUG00000015966	rnpc3	83	75.000	ENSCGRG00001019276	Rnpc3	79	75.000	Cricetulus_griseus_chok1gshd
ENSHBUG00000015966	rnpc3	74	50.267	ENSCGRG00000000053	Rnpc3	81	51.902	Cricetulus_griseus_crigri
ENSHBUG00000015966	rnpc3	84	71.186	ENSCSEG00000013475	rnpc3	81	75.706	Cynoglossus_semilaevis
ENSHBUG00000015966	rnpc3	85	81.250	ENSCVAG00000002645	rnpc3	83	81.250	Cyprinodon_variegatus
ENSHBUG00000015966	rnpc3	85	66.667	ENSDARG00000011247	rnpc3	84	72.785	Danio_rerio
ENSHBUG00000015966	rnpc3	82	78.947	ENSDNOG00000047498	-	78	78.947	Dasypus_novemcinctus
ENSHBUG00000015966	rnpc3	82	76.316	ENSDNOG00000044555	-	78	76.316	Dasypus_novemcinctus
ENSHBUG00000015966	rnpc3	82	78.947	ENSDORG00000027343	Rnpc3	78	78.947	Dipodomys_ordii
ENSHBUG00000015966	rnpc3	83	54.545	ENSEBUG00000002068	rnpc3	81	54.545	Eptatretus_burgeri
ENSHBUG00000015966	rnpc3	82	81.579	ENSEASG00005015957	RNPC3	78	81.579	Equus_asinus_asinus
ENSHBUG00000015966	rnpc3	82	81.579	ENSECAG00000021148	RNPC3	78	81.579	Equus_caballus
ENSHBUG00000015966	rnpc3	85	67.010	ENSELUG00000002264	rnpc3	82	65.803	Esox_lucius
ENSHBUG00000015966	rnpc3	82	78.947	ENSFCAG00000024312	RNPC3	78	78.947	Felis_catus
ENSHBUG00000015966	rnpc3	74	54.645	ENSFALG00000002580	RNPC3	99	54.067	Ficedula_albicollis
ENSHBUG00000015966	rnpc3	82	81.579	ENSFDAG00000019948	RNPC3	78	81.579	Fukomys_damarensis
ENSHBUG00000015966	rnpc3	85	83.333	ENSFHEG00000020647	rnpc3	82	83.333	Fundulus_heteroclitus
ENSHBUG00000015966	rnpc3	84	75.000	ENSGMOG00000019213	rnpc3	81	75.000	Gadus_morhua
ENSHBUG00000015966	rnpc3	82	68.421	ENSGALG00000005162	RNPC3	73	68.421	Gallus_gallus
ENSHBUG00000015966	rnpc3	85	77.083	ENSGAFG00000017236	rnpc3	83	77.083	Gambusia_affinis
ENSHBUG00000015966	rnpc3	85	81.250	ENSGACG00000002048	rnpc3	82	81.250	Gasterosteus_aculeatus
ENSHBUG00000015966	rnpc3	82	69.231	ENSGAGG00000008438	RNPC3	78	69.231	Gopherus_agassizii
ENSHBUG00000015966	rnpc3	82	57.143	ENSGGOG00000026201	-	82	57.143	Gorilla_gorilla
ENSHBUG00000015966	rnpc3	82	81.579	ENSHGLG00000001708	RNPC3	78	81.579	Heterocephalus_glaber_female
ENSHBUG00000015966	rnpc3	82	81.579	ENSHGLG00100003005	RNPC3	78	81.579	Heterocephalus_glaber_male
ENSHBUG00000015966	rnpc3	85	73.569	ENSHCOG00000017135	rnpc3	82	71.662	Hippocampus_comes
ENSHBUG00000015966	rnpc3	85	64.583	ENSIPUG00000002916	rnpc3	82	65.054	Ictalurus_punctatus
ENSHBUG00000015966	rnpc3	82	78.947	ENSSTOG00000025020	RNPC3	78	78.947	Ictidomys_tridecemlineatus
ENSHBUG00000015966	rnpc3	82	78.947	ENSJJAG00000010203	Rnpc3	79	78.947	Jaculus_jaculus
ENSHBUG00000015966	rnpc3	85	83.673	ENSKMAG00000017358	rnpc3	83	83.673	Kryptolebias_marmoratus
ENSHBUG00000015966	rnpc3	85	81.250	ENSLBEG00000024901	rnpc3	81	81.250	Labrus_bergylta
ENSHBUG00000015966	rnpc3	85	62.500	ENSLACG00000005720	RNPC3	76	62.500	Latimeria_chalumnae
ENSHBUG00000015966	rnpc3	85	66.667	ENSLOCG00000007986	rnpc3	82	66.667	Lepisosteus_oculatus
ENSHBUG00000015966	rnpc3	82	78.947	ENSLAFG00000032342	RNPC3	78	78.947	Loxodonta_africana
ENSHBUG00000015966	rnpc3	82	78.947	ENSMFAG00000002004	RNPC3	78	78.947	Macaca_fascicularis
ENSHBUG00000015966	rnpc3	73	47.507	ENSMFAG00000002917	-	78	46.765	Macaca_fascicularis
ENSHBUG00000015966	rnpc3	55	72.727	ENSMMUG00000002098	-	71	45.217	Macaca_mulatta
ENSHBUG00000015966	rnpc3	82	78.947	ENSMMUG00000018039	RNPC3	78	78.947	Macaca_mulatta
ENSHBUG00000015966	rnpc3	73	47.368	ENSMNEG00000029209	-	77	46.628	Macaca_nemestrina
ENSHBUG00000015966	rnpc3	82	78.947	ENSMNEG00000033950	RNPC3	77	78.947	Macaca_nemestrina
ENSHBUG00000015966	rnpc3	73	48.235	ENSMLEG00000034644	-	74	47.493	Mandrillus_leucophaeus
ENSHBUG00000015966	rnpc3	82	78.947	ENSMLEG00000033628	RNPC3	78	78.947	Mandrillus_leucophaeus
ENSHBUG00000015966	rnpc3	84	72.917	ENSMAMG00000007496	rnpc3	82	72.917	Mastacembelus_armatus
ENSHBUG00000015966	rnpc3	85	100.000	ENSMZEG00005020233	rnpc3	83	100.000	Maylandia_zebra
ENSHBUG00000015966	rnpc3	74	54.692	ENSMGAG00000006381	RNPC3	81	53.619	Meleagris_gallopavo
ENSHBUG00000015966	rnpc3	82	78.947	ENSMAUG00000001358	Rnpc3	79	78.947	Mesocricetus_auratus
ENSHBUG00000015966	rnpc3	82	78.947	ENSMICG00000029591	RNPC3	78	78.947	Microcebus_murinus
ENSHBUG00000015966	rnpc3	82	78.947	ENSMOCG00000013423	Rnpc3	78	78.947	Microtus_ochrogaster
ENSHBUG00000015966	rnpc3	85	84.593	ENSMMOG00000005309	rnpc3	83	84.593	Mola_mola
ENSHBUG00000015966	rnpc3	83	67.500	ENSMODG00000002946	RNPC3	79	67.500	Monodelphis_domestica
ENSHBUG00000015966	rnpc3	84	76.087	ENSMALG00000015471	rnpc3	82	76.087	Monopterus_albus
ENSHBUG00000015966	rnpc3	82	78.947	MGP_CAROLIEiJ_G0025555	Rnpc3	80	78.947	Mus_caroli
ENSHBUG00000015966	rnpc3	82	78.947	ENSMUSG00000027981	Rnpc3	78	78.947	Mus_musculus
ENSHBUG00000015966	rnpc3	82	78.947	MGP_PahariEiJ_G0027001	Rnpc3	79	78.947	Mus_pahari
ENSHBUG00000015966	rnpc3	82	78.947	MGP_SPRETEiJ_G0026505	Rnpc3	79	78.947	Mus_spretus
ENSHBUG00000015966	rnpc3	82	78.947	ENSMPUG00000007349	RNPC3	78	78.947	Mustela_putorius_furo
ENSHBUG00000015966	rnpc3	82	78.947	ENSMLUG00000028743	RNPC3	78	78.947	Myotis_lucifugus
ENSHBUG00000015966	rnpc3	82	78.947	ENSNGAG00000010939	Rnpc3	79	78.947	Nannospalax_galili
ENSHBUG00000015966	rnpc3	85	100.000	ENSNBRG00000012196	rnpc3	79	100.000	Neolamprologus_brichardi
ENSHBUG00000015966	rnpc3	82	78.947	ENSNLEG00000012013	RNPC3	78	78.947	Nomascus_leucogenys
ENSHBUG00000015966	rnpc3	82	78.947	ENSODEG00000007612	RNPC3	78	78.947	Octodon_degus
ENSHBUG00000015966	rnpc3	85	97.959	ENSONIG00000004770	rnpc3	83	97.368	Oreochromis_niloticus
ENSHBUG00000015966	rnpc3	74	53.333	ENSOANG00000008220	RNPC3	79	53.659	Ornithorhynchus_anatinus
ENSHBUG00000015966	rnpc3	82	78.947	ENSOCUG00000004016	RNPC3	78	78.947	Oryctolagus_cuniculus
ENSHBUG00000015966	rnpc3	85	75.758	ENSORLG00000005694	rnpc3	82	75.000	Oryzias_latipes
ENSHBUG00000015966	rnpc3	85	76.584	ENSORLG00020005513	rnpc3	87	74.380	Oryzias_latipes_hni
ENSHBUG00000015966	rnpc3	85	76.309	ENSORLG00015002179	rnpc3	82	75.000	Oryzias_latipes_hsok
ENSHBUG00000015966	rnpc3	82	78.947	ENSOGAG00000026182	RNPC3	78	78.947	Otolemur_garnettii
ENSHBUG00000015966	rnpc3	82	78.947	ENSOARG00000018719	RNPC3	78	78.947	Ovis_aries
ENSHBUG00000015966	rnpc3	81	65.789	ENSPPAG00000030278	-	80	59.524	Pan_paniscus
ENSHBUG00000015966	rnpc3	82	78.947	ENSPPAG00000037459	RNPC3	78	78.947	Pan_paniscus
ENSHBUG00000015966	rnpc3	82	78.947	ENSPPRG00000020246	RNPC3	78	78.947	Panthera_pardus
ENSHBUG00000015966	rnpc3	82	78.947	ENSPTIG00000009887	RNPC3	80	78.947	Panthera_tigris_altaica
ENSHBUG00000015966	rnpc3	82	78.947	ENSPTRG00000033902	RNPC3	78	78.947	Pan_troglodytes
ENSHBUG00000015966	rnpc3	73	49.429	ENSPTRG00000044227	-	74	48.857	Pan_troglodytes
ENSHBUG00000015966	rnpc3	82	78.947	ENSPANG00000012137	RNPC3	78	78.947	Papio_anubis
ENSHBUG00000015966	rnpc3	73	47.863	ENSPANG00000029957	-	74	46.018	Papio_anubis
ENSHBUG00000015966	rnpc3	82	73.913	ENSPKIG00000008828	rnpc3	80	73.913	Paramormyrops_kingsleyae
ENSHBUG00000015966	rnpc3	65	51.829	ENSPSIG00000007396	RNPC3	99	50.915	Pelodiscus_sinensis
ENSHBUG00000015966	rnpc3	84	68.085	ENSPMGG00000011742	rnpc3	81	69.767	Periophthalmus_magnuspinnatus
ENSHBUG00000015966	rnpc3	74	50.802	ENSPEMG00000020112	Rnpc3	81	52.174	Peromyscus_maniculatus_bairdii
ENSHBUG00000015966	rnpc3	74	41.117	ENSPMAG00000003778	rnpc3	51	46.520	Petromyzon_marinus
ENSHBUG00000015966	rnpc3	83	67.500	ENSPCIG00000004415	-	79	67.500	Phascolarctos_cinereus
ENSHBUG00000015966	rnpc3	85	77.628	ENSPFOG00000009895	rnpc3	82	77.083	Poecilia_formosa
ENSHBUG00000015966	rnpc3	85	77.089	ENSPLAG00000012023	rnpc3	82	77.083	Poecilia_latipinna
ENSHBUG00000015966	rnpc3	85	77.688	ENSPMEG00000003663	rnpc3	82	77.083	Poecilia_mexicana
ENSHBUG00000015966	rnpc3	85	77.628	ENSPREG00000010206	rnpc3	83	76.280	Poecilia_reticulata
ENSHBUG00000015966	rnpc3	65	78.947	ENSPPYG00000001102	RNPC3	74	78.947	Pongo_abelii
ENSHBUG00000015966	rnpc3	85	97.959	ENSPNYG00000020603	rnpc3	82	97.959	Pundamilia_nyererei
ENSHBUG00000015966	rnpc3	85	68.750	ENSPNAG00000000524	rnpc3	76	68.750	Pygocentrus_nattereri
ENSHBUG00000015966	rnpc3	82	78.947	ENSRNOG00000017310	Rnpc3	78	78.947	Rattus_norvegicus
ENSHBUG00000015966	rnpc3	82	78.947	ENSRBIG00000043897	RNPC3	77	78.947	Rhinopithecus_bieti
ENSHBUG00000015966	rnpc3	82	78.947	ENSRROG00000032334	RNPC3	78	78.947	Rhinopithecus_roxellana
ENSHBUG00000015966	rnpc3	82	78.947	ENSSBOG00000024473	RNPC3	78	78.947	Saimiri_boliviensis_boliviensis
ENSHBUG00000015966	rnpc3	83	67.500	ENSSHAG00000011859	RNPC3	79	67.500	Sarcophilus_harrisii
ENSHBUG00000015966	rnpc3	82	75.676	ENSSFOG00015013055	rnpc3	81	75.676	Scleropages_formosus
ENSHBUG00000015966	rnpc3	85	77.083	ENSSMAG00000020346	rnpc3	82	77.083	Scophthalmus_maximus
ENSHBUG00000015966	rnpc3	85	85.417	ENSSDUG00000006600	rnpc3	82	85.417	Seriola_dumerili
ENSHBUG00000015966	rnpc3	85	85.417	ENSSLDG00000007979	rnpc3	82	85.417	Seriola_lalandi_dorsalis
ENSHBUG00000015966	rnpc3	81	66.667	ENSSPUG00000003872	-	74	66.667	Sphenodon_punctatus
ENSHBUG00000015966	rnpc3	81	71.795	ENSSPUG00000008539	-	76	71.795	Sphenodon_punctatus
ENSHBUG00000015966	rnpc3	85	85.417	ENSSPAG00000005633	rnpc3	83	85.417	Stegastes_partitus
ENSHBUG00000015966	rnpc3	82	78.947	ENSSSCG00000037254	RNPC3	78	78.947	Sus_scrofa
ENSHBUG00000015966	rnpc3	74	56.198	ENSTGUG00000004795	-	81	52.066	Taeniopygia_guttata
ENSHBUG00000015966	rnpc3	85	76.630	ENSTNIG00000018963	rnpc3	82	73.913	Tetraodon_nigroviridis
ENSHBUG00000015966	rnpc3	82	78.947	ENSUMAG00000007775	RNPC3	80	78.947	Ursus_maritimus
ENSHBUG00000015966	rnpc3	82	78.947	ENSVVUG00000000331	RNPC3	78	78.947	Vulpes_vulpes
ENSHBUG00000015966	rnpc3	74	43.370	ENSXETG00000025027	rnpc3	72	40.584	Xenopus_tropicalis
ENSHBUG00000015966	rnpc3	85	77.961	ENSXCOG00000005013	rnpc3	81	77.135	Xiphophorus_couchianus
ENSHBUG00000015966	rnpc3	85	77.083	ENSXMAG00000006495	rnpc3	83	77.083	Xiphophorus_maculatus