EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016017 (Gene tree)
Gene ID: 102303483
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 27382 bases
Position: chrJH425550.1:713511-740892
Accession: 102303483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014198	ResIII	PF04851.15	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033280	-	3286	XM_005937583	ENSHBUP00000014198	935 (aa)	XP_005937645	-

Gene Model

Click here to download ENSHBUG00000016017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016017	rad54b	65	46.290	ENSHBUG00000007793	rad54l	86	45.659
ENSHBUG00000016017	rad54b	53	32.485	ENSHBUG00000007464	chd1l	51	31.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016017	rad54b	99	53.312	ENSG00000197275	RAD54B	99	53.312	Homo_sapiens
ENSHBUG00000016017	rad54b	78	58.060	ENSG00000265817	FSBP	99	58.060	Homo_sapiens
ENSHBUG00000016017	rad54b	99	54.158	ENSAMEG00000005834	-	99	54.158	Ailuropoda_melanoleuca
ENSHBUG00000016017	rad54b	90	93.182	ENSACIG00000013005	rad54b	95	93.182	Amphilophus_citrinellus
ENSHBUG00000016017	rad54b	99	85.531	ENSAOCG00000008523	rad54b	100	85.638	Amphiprion_ocellaris
ENSHBUG00000016017	rad54b	99	77.063	ENSAPEG00000001673	rad54b	99	77.063	Amphiprion_percula
ENSHBUG00000016017	rad54b	99	83.940	ENSATEG00000001527	rad54b	100	84.154	Anabas_testudineus
ENSHBUG00000016017	rad54b	99	56.915	ENSAPLG00000014366	-	99	56.915	Anas_platyrhynchos
ENSHBUG00000016017	rad54b	84	59.949	ENSACAG00000003671	-	98	59.949	Anolis_carolinensis
ENSHBUG00000016017	rad54b	69	59.630	ENSANAG00000019528	-	99	59.630	Aotus_nancymaae
ENSHBUG00000016017	rad54b	91	100.000	ENSACLG00000007826	rad54b	99	100.000	Astatotilapia_calliptera
ENSHBUG00000016017	rad54b	84	69.632	ENSAMXG00000039985	rad54b	94	69.018	Astyanax_mexicanus
ENSHBUG00000016017	rad54b	99	54.633	ENSBTAG00000000632	RAD54B	99	54.633	Bos_taurus
ENSHBUG00000016017	rad54b	76	35.984	WBGene00013792	Y116A8C.13	97	33.877	Caenorhabditis_elegans
ENSHBUG00000016017	rad54b	99	53.583	ENSCJAG00000000080	-	99	57.923	Callithrix_jacchus
ENSHBUG00000016017	rad54b	99	54.459	ENSCAFG00000009179	RAD54B	100	54.459	Canis_familiaris
ENSHBUG00000016017	rad54b	99	54.459	ENSCAFG00020012084	-	100	54.459	Canis_lupus_dingo
ENSHBUG00000016017	rad54b	99	54.749	ENSCHIG00000008230	-	99	54.749	Capra_hircus
ENSHBUG00000016017	rad54b	99	54.225	ENSTSYG00000013234	-	99	54.225	Carlito_syrichta
ENSHBUG00000016017	rad54b	99	54.915	ENSCPOG00000011643	-	99	54.915	Cavia_porcellus
ENSHBUG00000016017	rad54b	99	53.919	ENSCCAG00000011754	-	99	57.838	Cebus_capucinus
ENSHBUG00000016017	rad54b	99	53.426	ENSCATG00000030661	-	99	58.276	Cercocebus_atys
ENSHBUG00000016017	rad54b	99	54.439	ENSCLAG00000010476	-	99	54.439	Chinchilla_lanigera
ENSHBUG00000016017	rad54b	99	53.426	ENSCSAG00000012712	-	99	53.426	Chlorocebus_sabaeus
ENSHBUG00000016017	rad54b	99	56.854	ENSCPBG00000003204	-	98	58.121	Chrysemys_picta_bellii
ENSHBUG00000016017	rad54b	99	53.533	ENSCANG00000017939	-	99	58.413	Colobus_angolensis_palliatus
ENSHBUG00000016017	rad54b	99	53.262	ENSCGRG00001020184	Rad54b	99	53.262	Cricetulus_griseus_chok1gshd
ENSHBUG00000016017	rad54b	99	52.077	ENSCGRG00000016752	Rad54b	99	52.077	Cricetulus_griseus_crigri
ENSHBUG00000016017	rad54b	99	74.784	ENSCSEG00000001601	rad54b	99	74.624	Cynoglossus_semilaevis
ENSHBUG00000016017	rad54b	99	77.849	ENSCVAG00000009200	rad54b	100	77.849	Cyprinodon_variegatus
ENSHBUG00000016017	rad54b	99	62.672	ENSDARG00000092134	rad54b	99	69.688	Danio_rerio
ENSHBUG00000016017	rad54b	99	54.594	ENSDNOG00000015535	-	99	54.594	Dasypus_novemcinctus
ENSHBUG00000016017	rad54b	99	54.749	ENSDORG00000002492	Rad54b	99	54.749	Dipodomys_ordii
ENSHBUG00000016017	rad54b	86	55.800	ENSETEG00000010605	-	100	55.800	Echinops_telfairi
ENSHBUG00000016017	rad54b	98	46.835	ENSEBUG00000009104	rad54b	98	46.829	Eptatretus_burgeri
ENSHBUG00000016017	rad54b	84	59.524	ENSEASG00005004021	-	89	59.524	Equus_asinus_asinus
ENSHBUG00000016017	rad54b	99	54.207	ENSECAG00000021949	-	99	54.207	Equus_caballus
ENSHBUG00000016017	rad54b	70	53.374	ENSEEUG00000008056	-	72	53.374	Erinaceus_europaeus
ENSHBUG00000016017	rad54b	99	72.417	ENSELUG00000009287	rad54b	99	72.465	Esox_lucius
ENSHBUG00000016017	rad54b	99	54.234	ENSFCAG00000015513	-	99	59.345	Felis_catus
ENSHBUG00000016017	rad54b	99	56.748	ENSFALG00000005467	-	99	56.748	Ficedula_albicollis
ENSHBUG00000016017	rad54b	99	54.313	ENSFDAG00000020541	-	100	54.313	Fukomys_damarensis
ENSHBUG00000016017	rad54b	88	81.499	ENSFHEG00000014382	rad54b	91	81.499	Fundulus_heteroclitus
ENSHBUG00000016017	rad54b	84	81.566	ENSGMOG00000014774	rad54b	98	81.772	Gadus_morhua
ENSHBUG00000016017	rad54b	99	56.342	ENSGALG00000043597	RAD54B	99	56.342	Gallus_gallus
ENSHBUG00000016017	rad54b	99	82.246	ENSGAFG00000007901	rad54b	99	82.892	Gambusia_affinis
ENSHBUG00000016017	rad54b	99	78.762	ENSGACG00000009128	rad54b	99	78.762	Gasterosteus_aculeatus
ENSHBUG00000016017	rad54b	99	57.188	ENSGAGG00000018747	-	99	57.188	Gopherus_agassizii
ENSHBUG00000016017	rad54b	99	53.476	ENSGGOG00000023516	-	99	53.476	Gorilla_gorilla
ENSHBUG00000016017	rad54b	99	54.237	ENSHGLG00000008263	RAD54B	99	54.237	Heterocephalus_glaber_female
ENSHBUG00000016017	rad54b	99	53.579	ENSHGLG00100008108	-	99	53.579	Heterocephalus_glaber_male
ENSHBUG00000016017	rad54b	99	72.258	ENSHCOG00000004764	rad54b	98	76.208	Hippocampus_comes
ENSHBUG00000016017	rad54b	99	62.866	ENSIPUG00000018531	rad54b	99	62.866	Ictalurus_punctatus
ENSHBUG00000016017	rad54b	99	53.175	ENSSTOG00000010791	-	99	53.212	Ictidomys_tridecemlineatus
ENSHBUG00000016017	rad54b	99	53.814	ENSJJAG00000010314	Rad54b	99	53.814	Jaculus_jaculus
ENSHBUG00000016017	rad54b	88	80.987	ENSKMAG00000004744	rad54b	96	80.987	Kryptolebias_marmoratus
ENSHBUG00000016017	rad54b	80	64.133	ENSLACG00000000859	-	100	64.133	Latimeria_chalumnae
ENSHBUG00000016017	rad54b	99	63.502	ENSLOCG00000010100	rad54b	94	69.202	Lepisosteus_oculatus
ENSHBUG00000016017	rad54b	84	57.431	ENSLAFG00000015315	-	97	57.431	Loxodonta_africana
ENSHBUG00000016017	rad54b	99	53.426	ENSMFAG00000031629	-	99	58.276	Macaca_fascicularis
ENSHBUG00000016017	rad54b	99	53.426	ENSMMUG00000005659	-	99	53.426	Macaca_mulatta
ENSHBUG00000016017	rad54b	99	53.526	ENSMNEG00000016408	-	99	53.526	Macaca_nemestrina
ENSHBUG00000016017	rad54b	99	53.426	ENSMLEG00000006946	-	99	53.426	Mandrillus_leucophaeus
ENSHBUG00000016017	rad54b	99	78.349	ENSMAMG00000012269	rad54b	99	78.349	Mastacembelus_armatus
ENSHBUG00000016017	rad54b	99	99.569	ENSMZEG00005005281	rad54b	100	99.569	Maylandia_zebra
ENSHBUG00000016017	rad54b	99	56.197	ENSMGAG00000012024	-	99	56.197	Meleagris_gallopavo
ENSHBUG00000016017	rad54b	99	52.304	ENSMAUG00000013586	Rad54b	99	52.304	Mesocricetus_auratus
ENSHBUG00000016017	rad54b	84	59.068	ENSMICG00000000754	-	90	59.068	Microcebus_murinus
ENSHBUG00000016017	rad54b	99	52.840	ENSMOCG00000020035	Rad54b	99	52.840	Microtus_ochrogaster
ENSHBUG00000016017	rad54b	86	85.450	ENSMMOG00000003394	rad54b	92	85.450	Mola_mola
ENSHBUG00000016017	rad54b	84	58.816	ENSMODG00000007343	-	97	58.816	Monodelphis_domestica
ENSHBUG00000016017	rad54b	68	87.031	ENSMALG00000001520	rad54b	99	87.031	Monopterus_albus
ENSHBUG00000016017	rad54b	99	53.723	MGP_CAROLIEiJ_G0025810	Rad54b	99	53.723	Mus_caroli
ENSHBUG00000016017	rad54b	99	52.854	ENSMUSG00000078773	Rad54b	99	52.854	Mus_musculus
ENSHBUG00000016017	rad54b	99	53.994	MGP_PahariEiJ_G0023933	Rad54b	99	53.994	Mus_pahari
ENSHBUG00000016017	rad54b	99	53.228	MGP_SPRETEiJ_G0026758	Rad54b	99	53.228	Mus_spretus
ENSHBUG00000016017	rad54b	84	59.194	ENSMPUG00000008878	-	97	59.497	Mustela_putorius_furo
ENSHBUG00000016017	rad54b	99	54.322	ENSMLUG00000008953	-	99	54.322	Myotis_lucifugus
ENSHBUG00000016017	rad54b	99	53.003	ENSNGAG00000017537	Rad54b	99	53.003	Nannospalax_galili
ENSHBUG00000016017	rad54b	91	98.634	ENSNBRG00000013394	rad54b	99	98.634	Neolamprologus_brichardi
ENSHBUG00000016017	rad54b	99	52.991	ENSNLEG00000003062	-	99	57.981	Nomascus_leucogenys
ENSHBUG00000016017	rad54b	68	61.125	ENSMEUG00000012426	-	68	61.125	Notamacropus_eugenii
ENSHBUG00000016017	rad54b	77	75.000	ENSODEG00000002650	-	97	59.877	Octodon_degus
ENSHBUG00000016017	rad54b	99	54.818	ENSODEG00000019564	-	99	54.818	Octodon_degus
ENSHBUG00000016017	rad54b	99	97.522	ENSONIG00000006067	rad54b	100	97.522	Oreochromis_niloticus
ENSHBUG00000016017	rad54b	81	59.552	ENSOANG00000011348	-	99	59.552	Ornithorhynchus_anatinus
ENSHBUG00000016017	rad54b	99	53.945	ENSOCUG00000016478	-	99	53.945	Oryctolagus_cuniculus
ENSHBUG00000016017	rad54b	99	80.724	ENSORLG00000008918	rad54b	100	87.597	Oryzias_latipes
ENSHBUG00000016017	rad54b	69	87.442	ENSORLG00020012171	rad54b	100	87.442	Oryzias_latipes_hni
ENSHBUG00000016017	rad54b	99	80.720	ENSORLG00015018536	rad54b	100	80.720	Oryzias_latipes_hsok
ENSHBUG00000016017	rad54b	83	86.010	ENSOMEG00000004345	rad54b	100	86.010	Oryzias_melastigma
ENSHBUG00000016017	rad54b	99	52.721	ENSOGAG00000007854	-	99	52.721	Otolemur_garnettii
ENSHBUG00000016017	rad54b	84	60.025	ENSOARG00000007691	-	97	60.025	Ovis_aries
ENSHBUG00000016017	rad54b	99	52.401	ENSPPAG00000029572	-	99	52.401	Pan_paniscus
ENSHBUG00000016017	rad54b	99	54.234	ENSPPRG00000007571	-	99	59.209	Panthera_pardus
ENSHBUG00000016017	rad54b	78	59.345	ENSPTIG00000012670	-	99	59.345	Panthera_tigris_altaica
ENSHBUG00000016017	rad54b	99	53.469	ENSPTRG00000020427	-	99	58.254	Pan_troglodytes
ENSHBUG00000016017	rad54b	99	53.426	ENSPANG00000019566	-	99	53.426	Papio_anubis
ENSHBUG00000016017	rad54b	99	64.681	ENSPKIG00000014974	rad54b	99	64.681	Paramormyrops_kingsleyae
ENSHBUG00000016017	rad54b	99	55.367	ENSPSIG00000002383	-	96	61.307	Pelodiscus_sinensis
ENSHBUG00000016017	rad54b	99	52.760	ENSPEMG00000012133	Rad54b	99	52.972	Peromyscus_maniculatus_bairdii
ENSHBUG00000016017	rad54b	84	58.861	ENSPMAG00000002916	rad54b	98	58.786	Petromyzon_marinus
ENSHBUG00000016017	rad54b	84	58.816	ENSPCIG00000020151	-	92	58.564	Phascolarctos_cinereus
ENSHBUG00000016017	rad54b	99	81.925	ENSPFOG00000023411	rad54b	99	81.925	Poecilia_formosa
ENSHBUG00000016017	rad54b	99	81.711	ENSPLAG00000010430	rad54b	99	81.711	Poecilia_latipinna
ENSHBUG00000016017	rad54b	99	82.139	ENSPMEG00000016873	rad54b	99	83.944	Poecilia_mexicana
ENSHBUG00000016017	rad54b	99	82.177	ENSPREG00000018443	rad54b	99	84.531	Poecilia_reticulata
ENSHBUG00000016017	rad54b	99	53.625	ENSPPYG00000018750	-	99	53.625	Pongo_abelii
ENSHBUG00000016017	rad54b	99	53.640	ENSPCOG00000026845	-	99	58.197	Propithecus_coquereli
ENSHBUG00000016017	rad54b	80	57.733	ENSPVAG00000000261	-	86	57.733	Pteropus_vampyrus
ENSHBUG00000016017	rad54b	86	95.262	ENSPNYG00000018303	rad54b	97	95.262	Pundamilia_nyererei
ENSHBUG00000016017	rad54b	99	63.791	ENSPNAG00000000295	rad54b	99	63.791	Pygocentrus_nattereri
ENSHBUG00000016017	rad54b	99	53.617	ENSRNOG00000039949	Rad54b	99	53.617	Rattus_norvegicus
ENSHBUG00000016017	rad54b	99	53.105	ENSRBIG00000020419	-	99	53.105	Rhinopithecus_bieti
ENSHBUG00000016017	rad54b	99	53.105	ENSRROG00000039897	-	99	53.105	Rhinopithecus_roxellana
ENSHBUG00000016017	rad54b	76	36.829	YBR073W	RDH54	79	37.183	Saccharomyces_cerevisiae
ENSHBUG00000016017	rad54b	99	53.583	ENSSBOG00000028501	-	99	53.583	Saimiri_boliviensis_boliviensis
ENSHBUG00000016017	rad54b	99	54.352	ENSSHAG00000017038	-	99	54.352	Sarcophilus_harrisii
ENSHBUG00000016017	rad54b	61	71.655	ENSSFOG00015008483	rad54b	89	71.655	Scleropages_formosus
ENSHBUG00000016017	rad54b	99	82.803	ENSSMAG00000018659	rad54b	98	85.106	Scophthalmus_maximus
ENSHBUG00000016017	rad54b	96	85.120	ENSSDUG00000001122	rad54b	96	85.120	Seriola_dumerili
ENSHBUG00000016017	rad54b	99	85.547	ENSSLDG00000013787	rad54b	99	85.547	Seriola_lalandi_dorsalis
ENSHBUG00000016017	rad54b	99	56.043	ENSSPUG00000016497	-	99	56.043	Sphenodon_punctatus
ENSHBUG00000016017	rad54b	99	82.024	ENSSPAG00000012800	rad54b	100	82.024	Stegastes_partitus
ENSHBUG00000016017	rad54b	99	53.961	ENSSSCG00000006101	-	98	58.942	Sus_scrofa
ENSHBUG00000016017	rad54b	99	56.310	ENSTGUG00000011880	-	99	56.310	Taeniopygia_guttata
ENSHBUG00000016017	rad54b	99	78.814	ENSTRUG00000010015	rad54b	99	78.814	Takifugu_rubripes
ENSHBUG00000016017	rad54b	99	50.211	ENSTTRG00000006312	-	99	50.425	Tursiops_truncatus
ENSHBUG00000016017	rad54b	99	54.516	ENSUMAG00000016401	-	99	54.516	Ursus_maritimus
ENSHBUG00000016017	rad54b	99	54.652	ENSVPAG00000003157	-	99	54.652	Vicugna_pacos
ENSHBUG00000016017	rad54b	99	47.034	ENSXETG00000025924	rad54b	98	52.750	Xenopus_tropicalis
ENSHBUG00000016017	rad54b	90	84.672	ENSXMAG00000013141	rad54b	98	84.672	Xiphophorus_maculatus