EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016150 (Gene tree)
Gene ID: 102301269
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 1716 bases
Position: chrJH425550.1:665525-667240
Accession: 102301269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014316	RRM_1	PF00076.22	5.2e-23	1	2
ENSHBUP00000014316	RRM_1	PF00076.22	5.2e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022272	-	1716	XM_005937576	ENSHBUP00000014316	571 (aa)	XP_005937638	UPI0003BCB97E

Gene Model

Click here to download ENSHBUG00000016150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016150	zgc:153215	82	45.455	ENSHBUG00000016227	rbm12b	72	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016150	zgc:153215	79	44.048	ENSG00000183808	RBM12B	98	45.000	Homo_sapiens
ENSHBUG00000016150	zgc:153215	92	52.208	ENSAPOG00000008836	zgc:153215	97	52.208	Acanthochromis_polyacanthus
ENSHBUG00000016150	zgc:153215	78	48.810	ENSAPOG00000013963	rbm12b	74	48.810	Acanthochromis_polyacanthus
ENSHBUG00000016150	zgc:153215	99	66.667	ENSACIG00000013317	zgc:153215	99	66.667	Amphilophus_citrinellus
ENSHBUG00000016150	zgc:153215	79	47.727	ENSACIG00000014943	rbm12b	97	47.727	Amphilophus_citrinellus
ENSHBUG00000016150	zgc:153215	81	75.000	ENSAOCG00000010819	zgc:153215	99	51.826	Amphiprion_ocellaris
ENSHBUG00000016150	zgc:153215	80	42.202	ENSAPEG00000022079	rbm12b	99	42.202	Amphiprion_percula
ENSHBUG00000016150	zgc:153215	100	58.362	ENSATEG00000001886	zgc:153215	99	58.362	Anabas_testudineus
ENSHBUG00000016150	zgc:153215	82	46.591	ENSACLG00000005575	rbm12b	72	46.591	Astatotilapia_calliptera
ENSHBUG00000016150	zgc:153215	65	33.129	ENSACLG00000005578	rbm12b	57	33.129	Astatotilapia_calliptera
ENSHBUG00000016150	zgc:153215	100	87.566	ENSACLG00000007675	zgc:153215	100	87.566	Astatotilapia_calliptera
ENSHBUG00000016150	zgc:153215	80	51.613	ENSAMXG00000020853	zgc:153215	99	34.429	Astyanax_mexicanus
ENSHBUG00000016150	zgc:153215	81	41.964	ENSAMXG00000041973	rbm12b	68	41.964	Astyanax_mexicanus
ENSHBUG00000016150	zgc:153215	76	41.972	ENSCSEG00000001575	-	99	41.972	Cynoglossus_semilaevis
ENSHBUG00000016150	zgc:153215	78	45.455	ENSCSEG00000004610	rbm12b	62	45.455	Cynoglossus_semilaevis
ENSHBUG00000016150	zgc:153215	85	63.218	ENSCVAG00000009259	-	99	63.218	Cyprinodon_variegatus
ENSHBUG00000016150	zgc:153215	99	36.724	ENSDARG00000055889	zgc:153215	99	36.897	Danio_rerio
ENSHBUG00000016150	zgc:153215	77	43.750	ENSETEG00000013005	-	55	43.750	Echinops_telfairi
ENSHBUG00000016150	zgc:153215	86	61.250	ENSELUG00000009039	zgc:153215	97	39.179	Esox_lucius
ENSHBUG00000016150	zgc:153215	72	68.132	ENSFHEG00000014539	zgc:153215	95	68.132	Fundulus_heteroclitus
ENSHBUG00000016150	zgc:153215	78	46.591	ENSGMOG00000013467	rbm12b	74	46.591	Gadus_morhua
ENSHBUG00000016150	zgc:153215	98	45.263	ENSGAFG00000007845	zgc:153215	98	45.263	Gambusia_affinis
ENSHBUG00000016150	zgc:153215	81	39.623	ENSGACG00000008682	rbm12b	72	39.623	Gasterosteus_aculeatus
ENSHBUG00000016150	zgc:153215	100	35.590	ENSIPUG00000019731	zgc:153215	99	35.590	Ictalurus_punctatus
ENSHBUG00000016150	zgc:153215	82	42.857	ENSKMAG00000013704	rbm12b	72	37.615	Kryptolebias_marmoratus
ENSHBUG00000016150	zgc:153215	86	57.937	ENSKMAG00000004958	zgc:153215	99	57.937	Kryptolebias_marmoratus
ENSHBUG00000016150	zgc:153215	82	45.238	ENSKMAG00000013715	rbm12b	74	39.450	Kryptolebias_marmoratus
ENSHBUG00000016150	zgc:153215	86	76.250	ENSLBEG00000002597	zgc:153215	99	54.196	Labrus_bergylta
ENSHBUG00000016150	zgc:153215	99	30.890	ENSLOCG00000018344	rbm12b	74	31.239	Lepisosteus_oculatus
ENSHBUG00000016150	zgc:153215	100	57.804	ENSMAMG00000012038	zgc:153215	99	57.804	Mastacembelus_armatus
ENSHBUG00000016150	zgc:153215	100	99.475	ENSMZEG00005005435	zgc:153215	100	99.475	Maylandia_zebra
ENSHBUG00000016150	zgc:153215	82	46.591	ENSMZEG00005015005	rbm12b	74	46.591	Maylandia_zebra
ENSHBUG00000016150	zgc:153215	78	46.591	ENSMZEG00005014845	rbm12b	72	46.591	Maylandia_zebra
ENSHBUG00000016150	zgc:153215	85	55.725	ENSMMOG00000003372	zgc:153215	99	55.725	Mola_mola
ENSHBUG00000016150	zgc:153215	81	43.182	ENSMMOG00000002404	rbm12b	69	43.182	Mola_mola
ENSHBUG00000016150	zgc:153215	99	49.825	ENSMALG00000001222	zgc:153215	99	49.825	Monopterus_albus
ENSHBUG00000016150	zgc:153215	78	46.591	ENSMALG00000012059	rbm12b	73	46.591	Monopterus_albus
ENSHBUG00000016150	zgc:153215	80	46.591	ENSNBRG00000015057	rbm12b	74	46.591	Neolamprologus_brichardi
ENSHBUG00000016150	zgc:153215	100	97.548	ENSNBRG00000013644	zgc:153215	100	97.548	Neolamprologus_brichardi
ENSHBUG00000016150	zgc:153215	99	89.046	ENSONIG00000006054	zgc:153215	100	89.046	Oreochromis_niloticus
ENSHBUG00000016150	zgc:153215	81	47.727	ENSONIG00000020612	rbm12b	74	47.727	Oreochromis_niloticus
ENSHBUG00000016150	zgc:153215	78	48.810	ENSORLG00000008228	rbm12b	72	48.810	Oryzias_latipes
ENSHBUG00000016150	zgc:153215	78	48.810	ENSORLG00020013619	rbm12b	72	48.810	Oryzias_latipes_hni
ENSHBUG00000016150	zgc:153215	78	48.810	ENSORLG00015019999	rbm12b	72	48.810	Oryzias_latipes_hsok
ENSHBUG00000016150	zgc:153215	79	67.073	ENSOMEG00000004220	zgc:153215	92	66.304	Oryzias_melastigma
ENSHBUG00000016150	zgc:153215	77	48.810	ENSOMEG00000022523	rbm12b	71	48.810	Oryzias_melastigma
ENSHBUG00000016150	zgc:153215	99	33.857	ENSPKIG00000014851	zgc:153215	99	33.857	Paramormyrops_kingsleyae
ENSHBUG00000016150	zgc:153215	99	42.178	ENSPFOG00000017451	zgc:153215	99	42.178	Poecilia_formosa
ENSHBUG00000016150	zgc:153215	84	51.818	ENSPLAG00000000232	zgc:153215	99	51.818	Poecilia_latipinna
ENSHBUG00000016150	zgc:153215	91	53.153	ENSPMEG00000016662	zgc:153215	99	53.153	Poecilia_mexicana
ENSHBUG00000016150	zgc:153215	99	45.502	ENSPREG00000018608	zgc:153215	99	45.502	Poecilia_reticulata
ENSHBUG00000016150	zgc:153215	82	46.591	ENSPNYG00000016696	rbm12b	74	46.591	Pundamilia_nyererei
ENSHBUG00000016150	zgc:153215	81	97.872	ENSPNYG00000018125	zgc:153215	97	97.872	Pundamilia_nyererei
ENSHBUG00000016150	zgc:153215	99	35.726	ENSPNAG00000025628	zgc:153215	99	35.726	Pygocentrus_nattereri
ENSHBUG00000016150	zgc:153215	99	36.505	ENSSFOG00015009427	zgc:153215	99	36.505	Scleropages_formosus
ENSHBUG00000016150	zgc:153215	86	64.835	ENSSMAG00000019013	zgc:153215	94	64.835	Scophthalmus_maximus
ENSHBUG00000016150	zgc:153215	100	54.498	ENSSDUG00000012545	zgc:153215	99	54.498	Seriola_dumerili
ENSHBUG00000016150	zgc:153215	100	60.513	ENSSLDG00000013581	zgc:153215	99	60.513	Seriola_lalandi_dorsalis
ENSHBUG00000016150	zgc:153215	78	41.667	ENSSARG00000011845	-	57	41.667	Sorex_araneus
ENSHBUG00000016150	zgc:153215	100	48.454	ENSSPAG00000023584	zgc:153215	100	48.711	Stegastes_partitus
ENSHBUG00000016150	zgc:153215	78	46.429	ENSTRUG00000013738	rbm12b	74	46.429	Takifugu_rubripes
ENSHBUG00000016150	zgc:153215	77	47.875	ENSTNIG00000018374	-	99	47.875	Tetraodon_nigroviridis
ENSHBUG00000016150	zgc:153215	78	36.709	ENSXETG00000025920	-	90	36.709	Xenopus_tropicalis
ENSHBUG00000016150	zgc:153215	78	39.535	ENSXETG00000014696	rbm12b	63	39.535	Xenopus_tropicalis
ENSHBUG00000016150	zgc:153215	99	45.122	ENSXCOG00000019654	zgc:153215	98	45.470	Xiphophorus_couchianus
ENSHBUG00000016150	zgc:153215	63	53.030	ENSXMAG00000013169	-	90	53.030	Xiphophorus_maculatus