EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016183 (Gene tree)
Gene ID: 102302273
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13747 bases
Position: chrJH425325.1:1765361-1779107
Accession: 102302273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000030874	RRM_1	PF00076.22	1.2e-24	1	1
ENSHBUP00000014335	RRM_1	PF00076.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033333	-	1871	XM_005913179	ENSHBUP00000014335	532 (aa)	XP_005913241	UPI0003AFD06A
ENSHBUT00000033337	-	1821	XM_005913181	ENSHBUP00000030874	512 (aa)	XP_005913243	UPI0003AF915B

Gene Model

Click here to download ENSHBUG00000016183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016183	cstf2	93	60.309	ENSG00000101811	CSTF2	81	93.407	Homo_sapiens
ENSHBUG00000016183	cstf2	93	91.331	ENSAPOG00000005630	cstf2	100	90.097	Acanthochromis_polyacanthus
ENSHBUG00000016183	cstf2	93	58.581	ENSAMEG00000002082	CSTF2	63	81.301	Ailuropoda_melanoleuca
ENSHBUG00000016183	cstf2	93	88.518	ENSACIG00000012852	cstf2	100	89.157	Amphilophus_citrinellus
ENSHBUG00000016183	cstf2	96	89.494	ENSAOCG00000020905	cstf2	100	88.716	Amphiprion_ocellaris
ENSHBUG00000016183	cstf2	96	89.689	ENSAPEG00000006526	cstf2	100	88.911	Amphiprion_percula
ENSHBUG00000016183	cstf2	96	89.555	ENSATEG00000018186	cstf2	100	89.279	Anabas_testudineus
ENSHBUG00000016183	cstf2	90	59.628	ENSAPLG00000007255	CSTF2	82	84.914	Anas_platyrhynchos
ENSHBUG00000016183	cstf2	92	78.148	ENSANAG00000022342	CSTF2	99	58.076	Aotus_nancymaae
ENSHBUG00000016183	cstf2	100	99.248	ENSACLG00000000779	cstf2	100	99.248	Astatotilapia_calliptera
ENSHBUG00000016183	cstf2	63	100.000	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSHBUG00000016183	cstf2	93	60.997	ENSBTAG00000003547	CSTF2	65	81.707	Bos_taurus
ENSHBUG00000016183	cstf2	93	62.575	ENSCJAG00000004422	CSTF2	52	82.573	Callithrix_jacchus
ENSHBUG00000016183	cstf2	93	60.653	ENSCAFG00000017551	CSTF2	80	65.105	Canis_familiaris
ENSHBUG00000016183	cstf2	93	77.407	ENSCAFG00020007619	CSTF2	80	65.105	Canis_lupus_dingo
ENSHBUG00000016183	cstf2	93	61.168	ENSCHIG00000016994	CSTF2	65	81.707	Capra_hircus
ENSHBUG00000016183	cstf2	94	60.307	ENSCPOG00000015255	CSTF2	84	93.464	Cavia_porcellus
ENSHBUG00000016183	cstf2	93	61.939	ENSCCAG00000032975	CSTF2	99	58.406	Cebus_capucinus
ENSHBUG00000016183	cstf2	93	62.118	ENSCATG00000022835	CSTF2	99	60.893	Cercocebus_atys
ENSHBUG00000016183	cstf2	93	60.549	ENSCLAG00000001904	CSTF2	85	91.667	Chinchilla_lanigera
ENSHBUG00000016183	cstf2	94	68.075	ENSCPBG00000014293	CSTF2	90	68.974	Chrysemys_picta_bellii
ENSHBUG00000016183	cstf2	93	62.118	ENSCANG00000030612	CSTF2	99	60.893	Colobus_angolensis_palliatus
ENSHBUG00000016183	cstf2	93	61.131	ENSCGRG00000003897	Cstf2	99	61.744	Cricetulus_griseus_crigri
ENSHBUG00000016183	cstf2	93	87.815	ENSCVAG00000005731	cstf2	100	87.879	Cyprinodon_variegatus
ENSHBUG00000016183	cstf2	75	100.000	ENSDARG00000090788	cstf2	99	89.744	Danio_rerio
ENSHBUG00000016183	cstf2	93	60.239	ENSDORG00000007195	Cstf2	83	94.040	Dipodomys_ordii
ENSHBUG00000016183	cstf2	73	80.000	ENSETEG00000004931	CSTF2	50	80.738	Echinops_telfairi
ENSHBUG00000016183	cstf2	86	57.443	ENSFALG00000003859	CSTF2	84	81.905	Ficedula_albicollis
ENSHBUG00000016183	cstf2	93	76.056	ENSFDAG00000002416	CSTF2	66	81.707	Fukomys_damarensis
ENSHBUG00000016183	cstf2	98	85.821	ENSFHEG00000017065	cstf2	98	86.007	Fundulus_heteroclitus
ENSHBUG00000016183	cstf2	92	76.042	ENSGMOG00000005145	cstf2	99	74.948	Gadus_morhua
ENSHBUG00000016183	cstf2	94	62.209	ENSGALG00000006760	CSTF2	99	62.153	Gallus_gallus
ENSHBUG00000016183	cstf2	93	86.100	ENSGAFG00000020027	cstf2	100	86.228	Gambusia_affinis
ENSHBUG00000016183	cstf2	93	79.576	ENSGACG00000017326	cstf2	98	81.202	Gasterosteus_aculeatus
ENSHBUG00000016183	cstf2	94	67.442	ENSGAGG00000006037	CSTF2	92	68.322	Gopherus_agassizii
ENSHBUG00000016183	cstf2	93	62.298	ENSGGOG00000022267	CSTF2	99	60.893	Gorilla_gorilla
ENSHBUG00000016183	cstf2	93	60.997	ENSHGLG00000000659	-	86	90.123	Heterocephalus_glaber_female
ENSHBUG00000016183	cstf2	93	60.997	ENSHGLG00100001130	-	86	90.123	Heterocephalus_glaber_male
ENSHBUG00000016183	cstf2	93	85.170	ENSHCOG00000005157	cstf2	97	84.940	Hippocampus_comes
ENSHBUG00000016183	cstf2	93	60.590	ENSSTOG00000023445	CSTF2	85	91.667	Ictidomys_tridecemlineatus
ENSHBUG00000016183	cstf2	93	60.892	ENSJJAG00000020507	Cstf2	85	91.667	Jaculus_jaculus
ENSHBUG00000016183	cstf2	96	85.571	ENSKMAG00000001068	cstf2	100	85.972	Kryptolebias_marmoratus
ENSHBUG00000016183	cstf2	66	92.405	ENSLBEG00000028720	cstf2	100	91.139	Labrus_bergylta
ENSHBUG00000016183	cstf2	94	61.008	ENSLACG00000015927	CSTF2	99	58.844	Latimeria_chalumnae
ENSHBUG00000016183	cstf2	97	85.075	ENSLOCG00000015300	cstf2	87	85.075	Lepisosteus_oculatus
ENSHBUG00000016183	cstf2	93	59.603	ENSLAFG00000000474	CSTF2	64	82.305	Loxodonta_africana
ENSHBUG00000016183	cstf2	93	62.118	ENSMFAG00000043888	CSTF2	99	60.893	Macaca_fascicularis
ENSHBUG00000016183	cstf2	93	62.118	ENSMMUG00000013008	CSTF2	99	60.893	Macaca_mulatta
ENSHBUG00000016183	cstf2	93	62.118	ENSMNEG00000041824	CSTF2	99	60.893	Macaca_nemestrina
ENSHBUG00000016183	cstf2	93	62.118	ENSMLEG00000036870	CSTF2	99	60.893	Mandrillus_leucophaeus
ENSHBUG00000016183	cstf2	91	90.909	ENSMAMG00000020364	cstf2	96	89.463	Mastacembelus_armatus
ENSHBUG00000016183	cstf2	96	99.220	ENSMZEG00005007200	cstf2	100	99.220	Maylandia_zebra
ENSHBUG00000016183	cstf2	81	77.143	ENSMGAG00000004139	CSTF2	76	77.143	Meleagris_gallopavo
ENSHBUG00000016183	cstf2	93	77.113	ENSMICG00000014121	CSTF2	62	82.645	Microcebus_murinus
ENSHBUG00000016183	cstf2	96	75.875	ENSMMOG00000000538	cstf2	100	76.265	Mola_mola
ENSHBUG00000016183	cstf2	94	61.258	ENSMODG00000011785	CSTF2	99	59.866	Monodelphis_domestica
ENSHBUG00000016183	cstf2	92	78.182	MGP_CAROLIEiJ_G0033383	Cstf2	85	92.308	Mus_caroli
ENSHBUG00000016183	cstf2	93	60.250	ENSMUSG00000031256	Cstf2	85	92.308	Mus_musculus
ENSHBUG00000016183	cstf2	92	78.182	MGP_PahariEiJ_G0031923	Cstf2	80	65.566	Mus_pahari
ENSHBUG00000016183	cstf2	93	75.972	MGP_SPRETEiJ_G0034548	Cstf2	85	92.308	Mus_spretus
ENSHBUG00000016183	cstf2	93	77.091	ENSMPUG00000002339	CSTF2	61	81.707	Mustela_putorius_furo
ENSHBUG00000016183	cstf2	90	79.923	ENSMLUG00000004598	CSTF2	60	82.857	Myotis_lucifugus
ENSHBUG00000016183	cstf2	89	91.368	ENSNBRG00000021694	cstf2	100	91.368	Neolamprologus_brichardi
ENSHBUG00000016183	cstf2	93	62.118	ENSNLEG00000007510	CSTF2	99	60.893	Nomascus_leucogenys
ENSHBUG00000016183	cstf2	94	62.390	ENSMEUG00000007875	-	99	62.700	Notamacropus_eugenii
ENSHBUG00000016183	cstf2	94	63.222	ENSMEUG00000011186	-	99	64.476	Notamacropus_eugenii
ENSHBUG00000016183	cstf2	84	61.377	ENSMEUG00000014025	-	100	61.988	Notamacropus_eugenii
ENSHBUG00000016183	cstf2	79	77.835	ENSOPRG00000003106	CSTF2	77	77.835	Ochotona_princeps
ENSHBUG00000016183	cstf2	93	61.054	ENSODEG00000002059	CSTF2	99	58.362	Octodon_degus
ENSHBUG00000016183	cstf2	94	97.818	ENSONIG00000002631	cstf2	86	97.818	Oreochromis_niloticus
ENSHBUG00000016183	cstf2	82	82.692	ENSOANG00000004208	CSTF2	72	84.483	Ornithorhynchus_anatinus
ENSHBUG00000016183	cstf2	93	60.345	ENSOCUG00000010468	CSTF2	81	59.783	Oryctolagus_cuniculus
ENSHBUG00000016183	cstf2	93	86.583	ENSORLG00000001380	cstf2	100	84.879	Oryzias_latipes
ENSHBUG00000016183	cstf2	93	86.583	ENSORLG00020021917	cstf2	100	84.879	Oryzias_latipes_hni
ENSHBUG00000016183	cstf2	93	86.583	ENSORLG00015011996	cstf2	100	84.879	Oryzias_latipes_hsok
ENSHBUG00000016183	cstf2	96	87.669	ENSOMEG00000015507	cstf2	100	86.747	Oryzias_melastigma
ENSHBUG00000016183	cstf2	92	76.923	ENSOGAG00000011192	CSTF2	61	81.557	Otolemur_garnettii
ENSHBUG00000016183	cstf2	93	61.168	ENSOARG00000001022	CSTF2	64	81.707	Ovis_aries
ENSHBUG00000016183	cstf2	93	62.298	ENSPPAG00000031804	CSTF2	99	60.893	Pan_paniscus
ENSHBUG00000016183	cstf2	93	62.298	ENSPTRG00000022090	CSTF2	99	60.893	Pan_troglodytes
ENSHBUG00000016183	cstf2	92	78.148	ENSPANG00000002303	CSTF2	99	60.893	Papio_anubis
ENSHBUG00000016183	cstf2	95	71.820	ENSPKIG00000005033	cstf2	93	72.782	Paramormyrops_kingsleyae
ENSHBUG00000016183	cstf2	93	88.632	ENSPMGG00000006534	cstf2	100	87.475	Periophthalmus_magnuspinnatus
ENSHBUG00000016183	cstf2	90	61.324	ENSPCIG00000002989	CSTF2	99	59.401	Phascolarctos_cinereus
ENSHBUG00000016183	cstf2	93	84.350	ENSPLAG00000011176	cstf2	100	85.127	Poecilia_latipinna
ENSHBUG00000016183	cstf2	93	84.725	ENSPMEG00000017743	cstf2	100	85.098	Poecilia_mexicana
ENSHBUG00000016183	cstf2	63	90.448	ENSPREG00000011481	cstf2	100	78.610	Poecilia_reticulata
ENSHBUG00000016183	cstf2	90	48.677	ENSPVAG00000008342	CSTF2	66	57.931	Pteropus_vampyrus
ENSHBUG00000016183	cstf2	96	92.593	ENSPNYG00000010852	cstf2	100	94.565	Pundamilia_nyererei
ENSHBUG00000016183	cstf2	93	62.274	ENSRBIG00000030745	CSTF2	99	60.676	Rhinopithecus_bieti
ENSHBUG00000016183	cstf2	93	62.118	ENSRROG00000045042	CSTF2	99	60.893	Rhinopithecus_roxellana
ENSHBUG00000016183	cstf2	92	78.148	ENSSBOG00000021649	CSTF2	99	58.076	Saimiri_boliviensis_boliviensis
ENSHBUG00000016183	cstf2	83	84.615	ENSSHAG00000003681	CSTF2	73	86.207	Sarcophilus_harrisii
ENSHBUG00000016183	cstf2	93	74.088	ENSSFOG00015006348	cstf2	97	72.640	Scleropages_formosus
ENSHBUG00000016183	cstf2	96	86.187	ENSSMAG00000013463	cstf2	100	87.938	Scophthalmus_maximus
ENSHBUG00000016183	cstf2	94	62.476	ENSSPUG00000005288	-	52	85.597	Sphenodon_punctatus
ENSHBUG00000016183	cstf2	93	61.895	ENSSSCG00000012486	CSTF2	65	82.041	Sus_scrofa
ENSHBUG00000016183	cstf2	94	59.631	ENSTGUG00000002253	CSTF2	87	84.337	Taeniopygia_guttata
ENSHBUG00000016183	cstf2	94	81.890	ENSTNIG00000016860	cstf2	99	82.470	Tetraodon_nigroviridis
ENSHBUG00000016183	cstf2	93	77.091	ENSUAMG00000026605	CSTF2	94	65.083	Ursus_americanus
ENSHBUG00000016183	cstf2	93	76.727	ENSUMAG00000012417	CSTF2	90	81.301	Ursus_maritimus
ENSHBUG00000016183	cstf2	73	70.833	ENSVPAG00000006466	CSTF2	54	80.816	Vicugna_pacos
ENSHBUG00000016183	cstf2	85	79.104	ENSXETG00000009642	cstf2	85	86.207	Xenopus_tropicalis
ENSHBUG00000016183	cstf2	72	98.485	ENSXCOG00000016436	cstf2	100	94.118	Xiphophorus_couchianus
ENSHBUG00000016183	cstf2	62	90.159	ENSXMAG00000013524	cstf2	100	80.935	Xiphophorus_maculatus