EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016192 (Gene tree)
Gene ID: 102297851
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 14424 bases
Position: chrJH425333.1:2620526-2634949
Accession: 102297851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014199	RRM_4	PF10598.9	3.3e-48	1	1
ENSHBUP00000014199	U5_2-snRNA_bdg	PF10597.9	7.8e-74	1	1
ENSHBUP00000014199	PRO8NT	PF08082.11	2e-87	1	1
ENSHBUP00000014199	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSHBUP00000014199	PROCN	PF08083.11	5.3e-236	1	1
ENSHBUP00000014199	PRP8_domainIV	PF12134.8	4.7e-130	1	1
ENSHBUP00000014199	PROCT	PF08084.11	3.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022129	-	7002	XM_005915902	ENSHBUP00000014199	2333 (aa)	XP_005915964	-

Gene Model

Click here to download ENSHBUG00000016192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016192	prpf8	100	97.604	ENSG00000174231	PRPF8	100	97.604	Homo_sapiens
ENSHBUG00000016192	prpf8	100	99.145	ENSAPOG00000010079	prpf8	100	99.145	Acanthochromis_polyacanthus
ENSHBUG00000016192	prpf8	100	97.604	ENSAMEG00000007940	PRPF8	100	97.604	Ailuropoda_melanoleuca
ENSHBUG00000016192	prpf8	100	97.495	ENSACIG00000018280	prpf8	100	97.495	Amphilophus_citrinellus
ENSHBUG00000016192	prpf8	100	99.145	ENSAOCG00000010725	prpf8	100	99.145	Amphiprion_ocellaris
ENSHBUG00000016192	prpf8	100	99.145	ENSAPEG00000014397	prpf8	100	99.145	Amphiprion_percula
ENSHBUG00000016192	prpf8	100	98.417	ENSATEG00000010062	prpf8	100	98.417	Anabas_testudineus
ENSHBUG00000016192	prpf8	96	98.221	ENSAPLG00000010357	PRPF8	100	98.221	Anas_platyrhynchos
ENSHBUG00000016192	prpf8	82	96.180	ENSACAG00000014784	PRPF8	99	96.180	Anolis_carolinensis
ENSHBUG00000016192	prpf8	100	97.604	ENSANAG00000032629	PRPF8	100	97.604	Aotus_nancymaae
ENSHBUG00000016192	prpf8	100	99.234	ENSACLG00000020858	prpf8	100	99.234	Astatotilapia_calliptera
ENSHBUG00000016192	prpf8	100	98.628	ENSAMXG00000020291	prpf8	100	98.628	Astyanax_mexicanus
ENSHBUG00000016192	prpf8	100	97.604	ENSBTAG00000011488	PRPF8	100	97.604	Bos_taurus
ENSHBUG00000016192	prpf8	99	86.327	WBGene00004187	prp-8	99	86.981	Caenorhabditis_elegans
ENSHBUG00000016192	prpf8	100	97.604	ENSCJAG00000001911	PRPF8	100	97.604	Callithrix_jacchus
ENSHBUG00000016192	prpf8	100	97.604	ENSCAFG00000019221	PRPF8	100	97.604	Canis_familiaris
ENSHBUG00000016192	prpf8	96	98.349	ENSCAFG00020009943	PRPF8	100	98.349	Canis_lupus_dingo
ENSHBUG00000016192	prpf8	100	97.604	ENSCHIG00000017499	PRPF8	100	97.604	Capra_hircus
ENSHBUG00000016192	prpf8	100	97.604	ENSTSYG00000014120	PRPF8	100	97.604	Carlito_syrichta
ENSHBUG00000016192	prpf8	96	96.125	ENSCAPG00000009459	PRPF8	99	96.125	Cavia_aperea
ENSHBUG00000016192	prpf8	100	97.604	ENSCPOG00000010379	PRPF8	100	97.604	Cavia_porcellus
ENSHBUG00000016192	prpf8	100	97.604	ENSCCAG00000031983	-	100	97.604	Cebus_capucinus
ENSHBUG00000016192	prpf8	100	97.604	ENSCATG00000038595	PRPF8	100	97.604	Cercocebus_atys
ENSHBUG00000016192	prpf8	100	97.604	ENSCLAG00000004388	PRPF8	100	97.604	Chinchilla_lanigera
ENSHBUG00000016192	prpf8	100	97.604	ENSCSAG00000013929	PRPF8	100	97.604	Chlorocebus_sabaeus
ENSHBUG00000016192	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSHBUG00000016192	prpf8	100	97.773	ENSCPBG00000020409	PRPF8	100	97.773	Chrysemys_picta_bellii
ENSHBUG00000016192	prpf8	99	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSHBUG00000016192	prpf8	100	97.604	ENSCANG00000043088	PRPF8	100	97.604	Colobus_angolensis_palliatus
ENSHBUG00000016192	prpf8	74	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSHBUG00000016192	prpf8	100	98.760	ENSCSEG00000007905	prpf8	100	98.760	Cynoglossus_semilaevis
ENSHBUG00000016192	prpf8	100	98.548	ENSDARG00000026180	prpf8	100	98.548	Danio_rerio
ENSHBUG00000016192	prpf8	93	97.700	ENSDNOG00000018471	PRPF8	99	97.700	Dasypus_novemcinctus
ENSHBUG00000016192	prpf8	84	96.244	ENSDORG00000006185	Prpf8	96	96.244	Dipodomys_ordii
ENSHBUG00000016192	prpf8	99	91.810	FBgn0033688	Prp8	96	92.042	Drosophila_melanogaster
ENSHBUG00000016192	prpf8	100	92.255	ENSETEG00000017592	PRPF8	100	92.255	Echinops_telfairi
ENSHBUG00000016192	prpf8	99	93.262	ENSEBUG00000006548	prpf8	99	93.262	Eptatretus_burgeri
ENSHBUG00000016192	prpf8	100	97.604	ENSEASG00005009514	PRPF8	100	97.604	Equus_asinus_asinus
ENSHBUG00000016192	prpf8	98	98.374	ENSECAG00000021318	PRPF8	100	98.374	Equus_caballus
ENSHBUG00000016192	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSHBUG00000016192	prpf8	98	97.509	ENSELUG00000007120	prpf8	99	97.509	Esox_lucius
ENSHBUG00000016192	prpf8	100	97.604	ENSFCAG00000006297	PRPF8	100	97.604	Felis_catus
ENSHBUG00000016192	prpf8	100	97.773	ENSFALG00000006628	PRPF8	100	97.773	Ficedula_albicollis
ENSHBUG00000016192	prpf8	100	97.604	ENSFDAG00000004711	PRPF8	100	97.604	Fukomys_damarensis
ENSHBUG00000016192	prpf8	100	98.335	ENSFHEG00000021084	prpf8	100	98.335	Fundulus_heteroclitus
ENSHBUG00000016192	prpf8	100	96.404	ENSGMOG00000002028	prpf8	99	96.404	Gadus_morhua
ENSHBUG00000016192	prpf8	100	97.773	ENSGALG00000002943	PRPF8	100	97.773	Gallus_gallus
ENSHBUG00000016192	prpf8	99	98.247	ENSGAFG00000010337	prpf8	99	98.247	Gambusia_affinis
ENSHBUG00000016192	prpf8	100	98.757	ENSGACG00000008504	prpf8	100	98.757	Gasterosteus_aculeatus
ENSHBUG00000016192	prpf8	100	97.730	ENSGAGG00000008350	PRPF8	100	97.730	Gopherus_agassizii
ENSHBUG00000016192	prpf8	100	97.604	ENSGGOG00000005516	PRPF8	100	97.604	Gorilla_gorilla
ENSHBUG00000016192	prpf8	100	97.604	ENSHGLG00000012029	PRPF8	100	97.604	Heterocephalus_glaber_female
ENSHBUG00000016192	prpf8	100	97.604	ENSHGLG00100016494	PRPF8	100	97.604	Heterocephalus_glaber_male
ENSHBUG00000016192	prpf8	100	98.803	ENSHCOG00000016414	prpf8	100	98.803	Hippocampus_comes
ENSHBUG00000016192	prpf8	100	98.546	ENSIPUG00000023230	prpf8	100	98.546	Ictalurus_punctatus
ENSHBUG00000016192	prpf8	100	97.604	ENSSTOG00000005128	PRPF8	100	97.604	Ictidomys_tridecemlineatus
ENSHBUG00000016192	prpf8	100	95.464	ENSJJAG00000021159	Prpf8	100	95.464	Jaculus_jaculus
ENSHBUG00000016192	prpf8	100	98.292	ENSKMAG00000016118	prpf8	100	98.292	Kryptolebias_marmoratus
ENSHBUG00000016192	prpf8	100	98.760	ENSLBEG00000026903	prpf8	100	98.760	Labrus_bergylta
ENSHBUG00000016192	prpf8	95	95.528	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSHBUG00000016192	prpf8	99	98.544	ENSLOCG00000005409	prpf8	99	98.544	Lepisosteus_oculatus
ENSHBUG00000016192	prpf8	100	97.604	ENSLAFG00000015445	PRPF8	100	97.604	Loxodonta_africana
ENSHBUG00000016192	prpf8	100	97.604	ENSMFAG00000039995	PRPF8	100	97.604	Macaca_fascicularis
ENSHBUG00000016192	prpf8	100	97.604	ENSMMUG00000004820	PRPF8	100	97.604	Macaca_mulatta
ENSHBUG00000016192	prpf8	100	97.604	ENSMNEG00000035713	PRPF8	100	97.604	Macaca_nemestrina
ENSHBUG00000016192	prpf8	100	97.604	ENSMLEG00000037937	PRPF8	100	97.604	Mandrillus_leucophaeus
ENSHBUG00000016192	prpf8	100	99.016	ENSMAMG00000008919	prpf8	100	99.016	Mastacembelus_armatus
ENSHBUG00000016192	prpf8	100	99.234	ENSMZEG00005015073	prpf8	100	99.234	Maylandia_zebra
ENSHBUG00000016192	prpf8	100	97.773	ENSMGAG00000004769	PRPF8	100	97.773	Meleagris_gallopavo
ENSHBUG00000016192	prpf8	100	97.604	ENSMICG00000010320	PRPF8	100	97.604	Microcebus_murinus
ENSHBUG00000016192	prpf8	100	97.604	ENSMOCG00000016838	Prpf8	100	97.604	Microtus_ochrogaster
ENSHBUG00000016192	prpf8	100	98.460	ENSMMOG00000011887	prpf8	100	98.460	Mola_mola
ENSHBUG00000016192	prpf8	100	97.559	ENSMODG00000010480	PRPF8	100	97.559	Monodelphis_domestica
ENSHBUG00000016192	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSHBUG00000016192	prpf8	100	97.561	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.561	Mus_caroli
ENSHBUG00000016192	prpf8	100	97.561	ENSMUSG00000020850	Prpf8	100	97.561	Mus_musculus
ENSHBUG00000016192	prpf8	100	97.518	MGP_PahariEiJ_G0017877	Prpf8	100	97.518	Mus_pahari
ENSHBUG00000016192	prpf8	100	97.561	MGP_SPRETEiJ_G0017583	Prpf8	100	97.561	Mus_spretus
ENSHBUG00000016192	prpf8	100	97.604	ENSMPUG00000013227	PRPF8	100	97.604	Mustela_putorius_furo
ENSHBUG00000016192	prpf8	100	97.479	ENSMLUG00000002666	PRPF8	100	97.479	Myotis_lucifugus
ENSHBUG00000016192	prpf8	100	95.849	ENSNGAG00000005305	Prpf8	100	95.849	Nannospalax_galili
ENSHBUG00000016192	prpf8	100	99.277	ENSNBRG00000013127	prpf8	100	99.277	Neolamprologus_brichardi
ENSHBUG00000016192	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSHBUG00000016192	prpf8	99	96.436	ENSMEUG00000015999	PRPF8	100	96.436	Notamacropus_eugenii
ENSHBUG00000016192	prpf8	100	95.849	ENSOPRG00000003102	PRPF8	100	95.889	Ochotona_princeps
ENSHBUG00000016192	prpf8	100	97.604	ENSODEG00000008468	PRPF8	100	97.604	Octodon_degus
ENSHBUG00000016192	prpf8	100	99.191	ENSONIG00000008153	prpf8	100	99.191	Oreochromis_niloticus
ENSHBUG00000016192	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSHBUG00000016192	prpf8	100	97.604	ENSOCUG00000000081	PRPF8	100	97.604	Oryctolagus_cuniculus
ENSHBUG00000016192	prpf8	100	98.046	ENSORLG00000008036	prpf8	100	98.088	Oryzias_latipes
ENSHBUG00000016192	prpf8	100	98.004	ENSORLG00020021070	prpf8	100	98.047	Oryzias_latipes_hni
ENSHBUG00000016192	prpf8	100	98.046	ENSORLG00015002340	prpf8	100	98.088	Oryzias_latipes_hsok
ENSHBUG00000016192	prpf8	100	96.517	ENSOMEG00000016866	prpf8	100	96.517	Oryzias_melastigma
ENSHBUG00000016192	prpf8	100	97.479	ENSOARG00000013312	PRPF8	100	97.479	Ovis_aries
ENSHBUG00000016192	prpf8	100	97.604	ENSPPAG00000042753	PRPF8	100	97.604	Pan_paniscus
ENSHBUG00000016192	prpf8	100	97.604	ENSPPRG00000008746	PRPF8	100	97.604	Panthera_pardus
ENSHBUG00000016192	prpf8	100	97.518	ENSPTIG00000019200	PRPF8	100	97.518	Panthera_tigris_altaica
ENSHBUG00000016192	prpf8	100	97.604	ENSPTRG00000039576	PRPF8	100	97.604	Pan_troglodytes
ENSHBUG00000016192	prpf8	99	97.552	ENSPANG00000024607	PRPF8	99	97.552	Papio_anubis
ENSHBUG00000016192	prpf8	100	98.423	ENSPKIG00000011201	prpf8	100	98.423	Paramormyrops_kingsleyae
ENSHBUG00000016192	prpf8	100	97.730	ENSPSIG00000013393	PRPF8	100	97.730	Pelodiscus_sinensis
ENSHBUG00000016192	prpf8	100	97.604	ENSPEMG00000021699	Prpf8	100	97.604	Peromyscus_maniculatus_bairdii
ENSHBUG00000016192	prpf8	96	93.898	ENSPMAG00000005438	prpf8	100	93.942	Petromyzon_marinus
ENSHBUG00000016192	prpf8	100	97.559	ENSPCIG00000022603	PRPF8	100	98.260	Phascolarctos_cinereus
ENSHBUG00000016192	prpf8	100	97.964	ENSPFOG00000007005	prpf8	100	97.964	Poecilia_formosa
ENSHBUG00000016192	prpf8	100	97.300	ENSPLAG00000020777	prpf8	100	97.300	Poecilia_latipinna
ENSHBUG00000016192	prpf8	100	97.964	ENSPMEG00000004051	prpf8	100	97.964	Poecilia_mexicana
ENSHBUG00000016192	prpf8	100	98.671	ENSPREG00000021902	prpf8	100	98.671	Poecilia_reticulata
ENSHBUG00000016192	prpf8	100	97.604	ENSPPYG00000007777	PRPF8	100	97.604	Pongo_abelii
ENSHBUG00000016192	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSHBUG00000016192	prpf8	100	97.604	ENSPCOG00000015182	PRPF8	100	97.604	Propithecus_coquereli
ENSHBUG00000016192	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSHBUG00000016192	prpf8	100	100.000	ENSPNYG00000016356	prpf8	100	100.000	Pundamilia_nyererei
ENSHBUG00000016192	prpf8	100	98.717	ENSPNAG00000009247	prpf8	100	98.717	Pygocentrus_nattereri
ENSHBUG00000016192	prpf8	100	97.561	ENSRNOG00000003495	Prpf8	100	97.561	Rattus_norvegicus
ENSHBUG00000016192	prpf8	100	97.604	ENSRBIG00000031219	PRPF8	100	97.903	Rhinopithecus_bieti
ENSHBUG00000016192	prpf8	100	97.604	ENSRROG00000038014	PRPF8	100	97.903	Rhinopithecus_roxellana
ENSHBUG00000016192	prpf8	99	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSHBUG00000016192	prpf8	100	97.604	ENSSBOG00000029717	PRPF8	100	97.604	Saimiri_boliviensis_boliviensis
ENSHBUG00000016192	prpf8	100	97.516	ENSSHAG00000006167	PRPF8	100	97.516	Sarcophilus_harrisii
ENSHBUG00000016192	prpf8	100	98.292	ENSSFOG00015013905	prpf8	100	98.292	Scleropages_formosus
ENSHBUG00000016192	prpf8	100	98.845	ENSSMAG00000017736	prpf8	100	98.845	Scophthalmus_maximus
ENSHBUG00000016192	prpf8	100	99.187	ENSSDUG00000003029	prpf8	100	99.187	Seriola_dumerili
ENSHBUG00000016192	prpf8	68	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSHBUG00000016192	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSHBUG00000016192	prpf8	100	97.516	ENSSPUG00000007463	PRPF8	100	97.516	Sphenodon_punctatus
ENSHBUG00000016192	prpf8	100	98.546	ENSSPAG00000015639	prpf8	100	98.546	Stegastes_partitus
ENSHBUG00000016192	prpf8	100	97.604	ENSSSCG00000017817	PRPF8	100	97.604	Sus_scrofa
ENSHBUG00000016192	prpf8	100	97.773	ENSTGUG00000005648	-	100	97.773	Taeniopygia_guttata
ENSHBUG00000016192	prpf8	52	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSHBUG00000016192	prpf8	100	98.631	ENSTRUG00000015906	prpf8	100	98.631	Takifugu_rubripes
ENSHBUG00000016192	prpf8	95	99.582	ENSTNIG00000003460	prpf8	99	99.582	Tetraodon_nigroviridis
ENSHBUG00000016192	prpf8	93	98.911	ENSTBEG00000006431	PRPF8	93	98.911	Tupaia_belangeri
ENSHBUG00000016192	prpf8	100	97.047	ENSTTRG00000006869	PRPF8	100	97.047	Tursiops_truncatus
ENSHBUG00000016192	prpf8	54	96.352	ENSUAMG00000015644	-	96	96.352	Ursus_americanus
ENSHBUG00000016192	prpf8	100	97.347	ENSUMAG00000009385	PRPF8	100	97.347	Ursus_maritimus
ENSHBUG00000016192	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSHBUG00000016192	prpf8	100	97.604	ENSVVUG00000021695	PRPF8	99	97.604	Vulpes_vulpes
ENSHBUG00000016192	prpf8	100	97.605	ENSXETG00000022259	prpf8	100	97.605	Xenopus_tropicalis
ENSHBUG00000016192	prpf8	100	98.548	ENSXCOG00000012775	prpf8	100	98.548	Xiphophorus_couchianus
ENSHBUG00000016192	prpf8	100	98.505	ENSXMAG00000008505	prpf8	100	98.505	Xiphophorus_maculatus