EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016227 (Gene tree)
Gene ID: 102301661
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 1962 bases
Position: chrJH425496.1:988553-990514
Accession: 102301661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014381	RRM_1	PF00076.22	1.2e-30	1	3
ENSHBUP00000014381	RRM_1	PF00076.22	1.2e-30	2	3
ENSHBUP00000014381	RRM_1	PF00076.22	1.2e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033356	-	1962	XM_005934833	ENSHBUP00000014381	653 (aa)	XP_005934895	UPI0003BCA795

Gene Model

Click here to download ENSHBUG00000016227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016227	rbm12b	72	45.455	ENSHBUG00000016150	zgc:153215	82	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016227	rbm12b	84	46.753	ENSG00000183808	RBM12B	99	74.074	Homo_sapiens
ENSHBUG00000016227	rbm12b	100	65.954	ENSAPOG00000013963	rbm12b	100	65.954	Acanthochromis_polyacanthus
ENSHBUG00000016227	rbm12b	87	45.455	ENSAMEG00000007134	RBM12B	68	45.455	Ailuropoda_melanoleuca
ENSHBUG00000016227	rbm12b	99	77.987	ENSACIG00000014943	rbm12b	98	82.215	Amphilophus_citrinellus
ENSHBUG00000016227	rbm12b	100	67.939	ENSAOCG00000024270	rbm12b	100	68.092	Amphiprion_ocellaris
ENSHBUG00000016227	rbm12b	99	46.311	ENSAPEG00000022079	rbm12b	100	70.779	Amphiprion_percula
ENSHBUG00000016227	rbm12b	72	49.383	ENSATEG00000001886	zgc:153215	77	47.727	Anabas_testudineus
ENSHBUG00000016227	rbm12b	100	64.122	ENSATEG00000004578	rbm12b	97	64.122	Anabas_testudineus
ENSHBUG00000016227	rbm12b	100	37.657	ENSAPLG00000002020	RBM12B	100	39.230	Anas_platyrhynchos
ENSHBUG00000016227	rbm12b	94	37.500	ENSACAG00000003463	RBM12B	63	37.500	Anolis_carolinensis
ENSHBUG00000016227	rbm12b	84	46.753	ENSANAG00000034015	RBM12B	67	46.753	Aotus_nancymaae
ENSHBUG00000016227	rbm12b	100	74.083	ENSACLG00000005578	rbm12b	100	74.083	Astatotilapia_calliptera
ENSHBUG00000016227	rbm12b	100	94.190	ENSACLG00000005575	rbm12b	98	94.190	Astatotilapia_calliptera
ENSHBUG00000016227	rbm12b	64	55.952	ENSAMXG00000020853	zgc:153215	69	55.952	Astyanax_mexicanus
ENSHBUG00000016227	rbm12b	86	65.882	ENSAMXG00000041973	rbm12b	89	65.882	Astyanax_mexicanus
ENSHBUG00000016227	rbm12b	87	46.753	ENSBTAG00000013408	RBM12B	67	46.753	Bos_taurus
ENSHBUG00000016227	rbm12b	87	45.455	ENSCAFG00000009109	RBM12B	58	45.455	Canis_familiaris
ENSHBUG00000016227	rbm12b	87	45.455	ENSCAFG00020012203	RBM12B	66	45.455	Canis_lupus_dingo
ENSHBUG00000016227	rbm12b	72	40.000	ENSCHIG00000006790	RBM12B	67	40.000	Capra_hircus
ENSHBUG00000016227	rbm12b	84	46.753	ENSTSYG00000012515	RBM12B	61	46.753	Carlito_syrichta
ENSHBUG00000016227	rbm12b	84	48.052	ENSCAPG00000003543	RBM12B	60	48.052	Cavia_aperea
ENSHBUG00000016227	rbm12b	84	48.052	ENSCPOG00000007815	RBM12B	60	48.052	Cavia_porcellus
ENSHBUG00000016227	rbm12b	84	46.753	ENSCATG00000030769	RBM12B	65	46.753	Cercocebus_atys
ENSHBUG00000016227	rbm12b	84	48.052	ENSCLAG00000017617	RBM12B	60	48.052	Chinchilla_lanigera
ENSHBUG00000016227	rbm12b	84	46.753	ENSCSAG00000018559	RBM12B	56	46.753	Chlorocebus_sabaeus
ENSHBUG00000016227	rbm12b	82	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSHBUG00000016227	rbm12b	100	37.673	ENSCPBG00000003061	RBM12B	100	37.673	Chrysemys_picta_bellii
ENSHBUG00000016227	rbm12b	84	46.753	ENSCANG00000030379	RBM12B	65	46.753	Colobus_angolensis_palliatus
ENSHBUG00000016227	rbm12b	84	48.052	ENSCGRG00001008710	-	65	48.052	Cricetulus_griseus_chok1gshd
ENSHBUG00000016227	rbm12b	100	59.970	ENSCSEG00000004610	rbm12b	97	59.970	Cynoglossus_semilaevis
ENSHBUG00000016227	rbm12b	100	57.143	ENSCVAG00000011047	rbm12b	100	57.143	Cyprinodon_variegatus
ENSHBUG00000016227	rbm12b	72	34.862	ENSCVAG00000009259	-	99	34.862	Cyprinodon_variegatus
ENSHBUG00000016227	rbm12b	100	41.890	ENSDARG00000079717	rbm12b	100	42.897	Danio_rerio
ENSHBUG00000016227	rbm12b	84	46.753	ENSDNOG00000041608	RBM12B	56	46.753	Dasypus_novemcinctus
ENSHBUG00000016227	rbm12b	84	48.052	ENSDORG00000024034	-	60	48.052	Dipodomys_ordii
ENSHBUG00000016227	rbm12b	73	40.681	ENSETEG00000013005	-	68	40.079	Echinops_telfairi
ENSHBUG00000016227	rbm12b	87	46.753	ENSEASG00005016297	RBM12B	66	46.753	Equus_asinus_asinus
ENSHBUG00000016227	rbm12b	87	46.753	ENSECAG00000017870	RBM12B	59	46.753	Equus_caballus
ENSHBUG00000016227	rbm12b	84	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSHBUG00000016227	rbm12b	84	52.000	ENSFALG00000014893	RBM12B	84	52.000	Ficedula_albicollis
ENSHBUG00000016227	rbm12b	84	48.052	ENSFDAG00000005576	RBM12B	58	48.052	Fukomys_damarensis
ENSHBUG00000016227	rbm12b	100	59.237	ENSFHEG00000016425	rbm12b	100	59.237	Fundulus_heteroclitus
ENSHBUG00000016227	rbm12b	99	53.976	ENSGMOG00000013467	rbm12b	100	53.976	Gadus_morhua
ENSHBUG00000016227	rbm12b	100	38.385	ENSGALG00000035129	RBM12B	100	38.385	Gallus_gallus
ENSHBUG00000016227	rbm12b	100	63.359	ENSGAFG00000007224	rbm12b	100	63.359	Gambusia_affinis
ENSHBUG00000016227	rbm12b	100	61.585	ENSGACG00000008682	rbm12b	100	61.585	Gasterosteus_aculeatus
ENSHBUG00000016227	rbm12b	100	37.693	ENSGAGG00000009774	RBM12B	100	37.693	Gopherus_agassizii
ENSHBUG00000016227	rbm12b	84	46.753	ENSGGOG00000011909	RBM12B	64	46.753	Gorilla_gorilla
ENSHBUG00000016227	rbm12b	84	48.052	ENSHGLG00000009063	RBM12B	59	48.052	Heterocephalus_glaber_female
ENSHBUG00000016227	rbm12b	84	48.052	ENSHGLG00100021324	RBM12B	59	48.052	Heterocephalus_glaber_male
ENSHBUG00000016227	rbm12b	100	53.729	ENSHCOG00000014952	rbm12b	100	53.729	Hippocampus_comes
ENSHBUG00000016227	rbm12b	100	44.248	ENSIPUG00000001167	RBM12B	97	44.248	Ictalurus_punctatus
ENSHBUG00000016227	rbm12b	84	48.052	ENSSTOG00000027445	RBM12B	67	48.052	Ictidomys_tridecemlineatus
ENSHBUG00000016227	rbm12b	84	46.753	ENSJJAG00000004165	-	65	46.753	Jaculus_jaculus
ENSHBUG00000016227	rbm12b	100	58.626	ENSKMAG00000013715	rbm12b	100	58.626	Kryptolebias_marmoratus
ENSHBUG00000016227	rbm12b	100	58.779	ENSKMAG00000013704	rbm12b	97	58.779	Kryptolebias_marmoratus
ENSHBUG00000016227	rbm12b	72	30.200	ENSLBEG00000002597	zgc:153215	99	30.200	Labrus_bergylta
ENSHBUG00000016227	rbm12b	84	48.684	ENSLACG00000007177	RBM12B	100	39.331	Latimeria_chalumnae
ENSHBUG00000016227	rbm12b	100	46.275	ENSLOCG00000018344	rbm12b	100	46.275	Lepisosteus_oculatus
ENSHBUG00000016227	rbm12b	84	43.750	ENSLAFG00000029949	RBM12B	67	43.750	Loxodonta_africana
ENSHBUG00000016227	rbm12b	84	46.753	ENSMFAG00000045430	RBM12B	65	46.753	Macaca_fascicularis
ENSHBUG00000016227	rbm12b	84	46.753	ENSMMUG00000005558	RBM12B	64	46.753	Macaca_mulatta
ENSHBUG00000016227	rbm12b	84	46.753	ENSMNEG00000041292	RBM12B	65	46.753	Macaca_nemestrina
ENSHBUG00000016227	rbm12b	84	46.753	ENSMLEG00000037288	RBM12B	64	46.753	Mandrillus_leucophaeus
ENSHBUG00000016227	rbm12b	100	66.107	ENSMAMG00000011998	rbm12b	100	66.260	Mastacembelus_armatus
ENSHBUG00000016227	rbm12b	100	88.838	ENSMZEG00005014845	rbm12b	99	88.633	Maylandia_zebra
ENSHBUG00000016227	rbm12b	100	93.884	ENSMZEG00005015005	rbm12b	100	93.884	Maylandia_zebra
ENSHBUG00000016227	rbm12b	72	45.455	ENSMZEG00005005435	zgc:153215	79	45.455	Maylandia_zebra
ENSHBUG00000016227	rbm12b	72	41.923	ENSMGAG00000011985	RBM12B	99	41.779	Meleagris_gallopavo
ENSHBUG00000016227	rbm12b	84	48.052	ENSMAUG00000021752	-	68	48.052	Mesocricetus_auratus
ENSHBUG00000016227	rbm12b	87	46.753	ENSMICG00000036969	RBM12B	68	46.753	Microcebus_murinus
ENSHBUG00000016227	rbm12b	84	46.753	ENSMOCG00000005603	-	68	46.753	Microtus_ochrogaster
ENSHBUG00000016227	rbm12b	99	59.969	ENSMMOG00000002404	rbm12b	94	59.969	Mola_mola
ENSHBUG00000016227	rbm12b	84	44.156	ENSMODG00000007436	RBM12B	76	44.156	Monodelphis_domestica
ENSHBUG00000016227	rbm12b	71	31.106	ENSMALG00000001222	zgc:153215	98	31.106	Monopterus_albus
ENSHBUG00000016227	rbm12b	100	63.303	ENSMALG00000012059	rbm12b	100	63.303	Monopterus_albus
ENSHBUG00000016227	rbm12b	88	50.667	ENSMUSG00000046667	Rbm12b1	71	50.667	Mus_musculus
ENSHBUG00000016227	rbm12b	88	49.333	ENSMUSG00000052137	Rbm12b2	71	49.333	Mus_musculus
ENSHBUG00000016227	rbm12b	88	49.333	MGP_SPRETEiJ_G0026765	-	65	49.333	Mus_spretus
ENSHBUG00000016227	rbm12b	88	49.333	MGP_SPRETEiJ_G0026766	-	71	49.333	Mus_spretus
ENSHBUG00000016227	rbm12b	87	46.753	ENSMPUG00000018637	RBM12B	58	46.753	Mustela_putorius_furo
ENSHBUG00000016227	rbm12b	99	44.156	ENSMLUG00000002359	RBM12B	69	44.156	Myotis_lucifugus
ENSHBUG00000016227	rbm12b	84	45.455	ENSNGAG00000002801	-	61	45.455	Nannospalax_galili
ENSHBUG00000016227	rbm12b	100	94.190	ENSNBRG00000015057	rbm12b	100	94.190	Neolamprologus_brichardi
ENSHBUG00000016227	rbm12b	72	42.708	ENSNBRG00000013644	zgc:153215	83	42.708	Neolamprologus_brichardi
ENSHBUG00000016227	rbm12b	84	46.753	ENSNLEG00000032050	RBM12B	64	46.753	Nomascus_leucogenys
ENSHBUG00000016227	rbm12b	84	48.052	ENSODEG00000019204	RBM12B	60	48.052	Octodon_degus
ENSHBUG00000016227	rbm12b	100	91.896	ENSONIG00000020612	rbm12b	100	91.896	Oreochromis_niloticus
ENSHBUG00000016227	rbm12b	84	46.753	ENSOANG00000015735	-	82	46.753	Ornithorhynchus_anatinus
ENSHBUG00000016227	rbm12b	84	46.753	ENSOCUG00000010353	RBM12B	65	46.753	Oryctolagus_cuniculus
ENSHBUG00000016227	rbm12b	100	60.611	ENSORLG00000008228	rbm12b	97	60.916	Oryzias_latipes
ENSHBUG00000016227	rbm12b	100	60.916	ENSORLG00020013619	rbm12b	97	60.916	Oryzias_latipes_hni
ENSHBUG00000016227	rbm12b	100	60.763	ENSORLG00015019999	rbm12b	97	61.069	Oryzias_latipes_hsok
ENSHBUG00000016227	rbm12b	100	61.832	ENSOMEG00000022523	rbm12b	97	61.832	Oryzias_melastigma
ENSHBUG00000016227	rbm12b	84	46.753	ENSOGAG00000002979	RBM12B	57	46.753	Otolemur_garnettii
ENSHBUG00000016227	rbm12b	84	46.753	ENSPTIG00000020071	RBM12B	65	46.753	Panthera_tigris_altaica
ENSHBUG00000016227	rbm12b	84	46.753	ENSPTRG00000020420	RBM12B	64	46.753	Pan_troglodytes
ENSHBUG00000016227	rbm12b	84	46.753	ENSPANG00000035535	RBM12B	64	46.753	Papio_anubis
ENSHBUG00000016227	rbm12b	100	48.316	ENSPKIG00000018719	rbm12b	99	48.191	Paramormyrops_kingsleyae
ENSHBUG00000016227	rbm12b	71	33.203	ENSPKIG00000014851	zgc:153215	99	33.203	Paramormyrops_kingsleyae
ENSHBUG00000016227	rbm12b	100	37.606	ENSPSIG00000001348	RBM12B	100	37.606	Pelodiscus_sinensis
ENSHBUG00000016227	rbm12b	65	51.077	ENSPMGG00000012348	-	97	51.077	Periophthalmus_magnuspinnatus
ENSHBUG00000016227	rbm12b	84	48.052	ENSPEMG00000008279	-	67	48.052	Peromyscus_maniculatus_bairdii
ENSHBUG00000016227	rbm12b	84	44.156	ENSPCIG00000008556	RBM12B	78	44.156	Phascolarctos_cinereus
ENSHBUG00000016227	rbm12b	72	41.429	ENSPFOG00000017451	zgc:153215	77	41.429	Poecilia_formosa
ENSHBUG00000016227	rbm12b	100	61.927	ENSPFOG00000020937	rbm12b	97	61.927	Poecilia_formosa
ENSHBUG00000016227	rbm12b	100	62.595	ENSPLAG00000018782	rbm12b	100	62.595	Poecilia_latipinna
ENSHBUG00000016227	rbm12b	100	62.748	ENSPMEG00000011418	rbm12b	100	62.748	Poecilia_mexicana
ENSHBUG00000016227	rbm12b	100	62.290	ENSPREG00000020770	rbm12b	100	62.290	Poecilia_reticulata
ENSHBUG00000016227	rbm12b	84	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSHBUG00000016227	rbm12b	84	45.455	ENSPCOG00000023546	RBM12B	65	45.455	Propithecus_coquereli
ENSHBUG00000016227	rbm12b	87	46.753	ENSPVAG00000011803	RBM12B	62	46.753	Pteropus_vampyrus
ENSHBUG00000016227	rbm12b	100	94.495	ENSPNYG00000016696	rbm12b	100	94.495	Pundamilia_nyererei
ENSHBUG00000016227	rbm12b	65	51.020	ENSPNAG00000025628	zgc:153215	77	51.020	Pygocentrus_nattereri
ENSHBUG00000016227	rbm12b	100	44.058	ENSPNAG00000008126	rbm12b	97	45.362	Pygocentrus_nattereri
ENSHBUG00000016227	rbm12b	87	49.333	ENSRNOG00000016330	Rbm12b	70	49.333	Rattus_norvegicus
ENSHBUG00000016227	rbm12b	76	37.944	ENSRNOG00000055292	LOC679087	69	37.944	Rattus_norvegicus
ENSHBUG00000016227	rbm12b	84	46.753	ENSRBIG00000035046	RBM12B	64	46.753	Rhinopithecus_bieti
ENSHBUG00000016227	rbm12b	84	46.753	ENSRROG00000023660	RBM12B	67	46.753	Rhinopithecus_roxellana
ENSHBUG00000016227	rbm12b	84	46.753	ENSSBOG00000027592	RBM12B	64	46.753	Saimiri_boliviensis_boliviensis
ENSHBUG00000016227	rbm12b	84	44.156	ENSSHAG00000015335	RBM12B	78	44.156	Sarcophilus_harrisii
ENSHBUG00000016227	rbm12b	100	46.619	ENSSFOG00015001584	rbm12b	100	46.619	Scleropages_formosus
ENSHBUG00000016227	rbm12b	72	33.922	ENSSFOG00015009427	zgc:153215	99	33.922	Scleropages_formosus
ENSHBUG00000016227	rbm12b	72	30.938	ENSSMAG00000019013	zgc:153215	96	30.938	Scophthalmus_maximus
ENSHBUG00000016227	rbm12b	100	65.145	ENSSMAG00000019708	rbm12b	100	65.145	Scophthalmus_maximus
ENSHBUG00000016227	rbm12b	100	67.066	ENSSDUG00000006856	rbm12b	100	67.066	Seriola_dumerili
ENSHBUG00000016227	rbm12b	100	67.365	ENSSLDG00000016156	rbm12b	100	67.365	Seriola_lalandi_dorsalis
ENSHBUG00000016227	rbm12b	72	51.852	ENSSLDG00000013581	zgc:153215	77	50.000	Seriola_lalandi_dorsalis
ENSHBUG00000016227	rbm12b	73	40.319	ENSSARG00000011845	-	67	40.319	Sorex_araneus
ENSHBUG00000016227	rbm12b	73	38.476	ENSSPUG00000016954	RBM12B	92	38.857	Sphenodon_punctatus
ENSHBUG00000016227	rbm12b	100	68.092	ENSSPAG00000006774	rbm12b	100	68.092	Stegastes_partitus
ENSHBUG00000016227	rbm12b	72	31.624	ENSSPAG00000023584	zgc:153215	98	31.410	Stegastes_partitus
ENSHBUG00000016227	rbm12b	87	45.333	ENSSSCG00000006110	RBM12B	59	45.333	Sus_scrofa
ENSHBUG00000016227	rbm12b	72	41.616	ENSTGUG00000011860	RBM12B	96	41.616	Taeniopygia_guttata
ENSHBUG00000016227	rbm12b	100	55.505	ENSTRUG00000013738	rbm12b	100	55.505	Takifugu_rubripes
ENSHBUG00000016227	rbm12b	73	38.833	ENSTBEG00000000449	RBM12B	63	38.833	Tupaia_belangeri
ENSHBUG00000016227	rbm12b	87	46.753	ENSUAMG00000023639	RBM12B	66	46.753	Ursus_americanus
ENSHBUG00000016227	rbm12b	87	46.753	ENSUMAG00000016008	RBM12B	63	46.753	Ursus_maritimus
ENSHBUG00000016227	rbm12b	87	45.455	ENSVVUG00000002694	RBM12B	66	45.455	Vulpes_vulpes
ENSHBUG00000016227	rbm12b	100	34.527	ENSXETG00000014694	rbm12b	100	37.838	Xenopus_tropicalis
ENSHBUG00000016227	rbm12b	73	34.298	ENSXETG00000014696	rbm12b	99	30.813	Xenopus_tropicalis
ENSHBUG00000016227	rbm12b	64	64.356	ENSXCOG00000019735	-	99	64.356	Xiphophorus_couchianus
ENSHBUG00000016227	rbm12b	60	38.636	ENSXMAG00000013169	-	96	38.636	Xiphophorus_maculatus
ENSHBUG00000016227	rbm12b	100	63.359	ENSXMAG00000014213	rbm12b	100	63.359	Xiphophorus_maculatus