EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: rho-related GTP-binding protein RhoU-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 11503 bases
Position: chrJH425598.1:696985-708487
Accession: 102301984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014437	zf-C2H2	PF00096.26	1.8e-17	1	4
ENSHBUP00000014437	zf-C2H2	PF00096.26	1.8e-17	2	4
ENSHBUP00000014437	zf-C2H2	PF00096.26	1.8e-17	3	4
ENSHBUP00000014437	zf-C2H2	PF00096.26	1.8e-17	4	4
ENSHBUP00000014462	zf-C2H2	PF00096.26	4.3e-17	1	3
ENSHBUP00000014462	zf-C2H2	PF00096.26	4.3e-17	2	3
ENSHBUP00000014462	zf-C2H2	PF00096.26	4.3e-17	3	3
ENSHBUP00000014437	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022470	-	6801	XM_005939976	ENSHBUP00000014462	675 (aa)	XP_005940038	-
ENSHBUT00000022440	-	1677	-	ENSHBUP00000014437	558 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000016325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016325	-	57	39.450	ENSHBUG00000011090	ZBTB14	61	39.815
ENSHBUG00000016325	-	96	33.884	ENSHBUG00000012173	zbtb16a	59	35.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016325	-	99	95.683	ENSACIG00000011093	ZBTB45	93	95.683	Amphilophus_citrinellus
ENSHBUG00000016325	-	100	93.109	ENSATEG00000021862	-	100	92.375	Anabas_testudineus
ENSHBUG00000016325	-	97	99.390	ENSACLG00000011491	-	100	91.556	Astatotilapia_calliptera
ENSHBUG00000016325	-	92	61.695	ENSAMXG00000029284	-	100	59.165	Astyanax_mexicanus
ENSHBUG00000016325	-	88	74.468	ENSCSEG00000020532	-	100	69.984	Cynoglossus_semilaevis
ENSHBUG00000016325	-	99	75.660	ENSELUG00000010847	-	100	75.477	Esox_lucius
ENSHBUG00000016325	-	59	74.797	ENSGALG00000033174	ZBTB45	86	75.410	Gallus_gallus
ENSHBUG00000016325	-	92	73.525	ENSHCOG00000020415	ZBTB45	98	72.684	Hippocampus_comes
ENSHBUG00000016325	-	97	53.833	ENSIPUG00000012817	-	99	52.959	Ictalurus_punctatus
ENSHBUG00000016325	-	99	98.014	ENSMZEG00005005506	-	93	98.014	Maylandia_zebra
ENSHBUG00000016325	-	61	74.940	ENSMMOG00000013613	-	93	74.940	Mola_mola
ENSHBUG00000016325	-	99	72.650	ENSMALG00000003135	ZBTB45	100	73.750	Monopterus_albus
ENSHBUG00000016325	-	100	99.852	ENSNBRG00000005305	-	100	99.852	Neolamprologus_brichardi
ENSHBUG00000016325	-	100	86.842	ENSORLG00000026423	-	99	83.386	Oryzias_latipes
ENSHBUG00000016325	-	95	58.423	ENSPKIG00000007182	-	96	56.467	Paramormyrops_kingsleyae
ENSHBUG00000016325	-	97	76.573	ENSPMGG00000016153	-	98	75.309	Periophthalmus_magnuspinnatus
ENSHBUG00000016325	-	97	70.652	ENSPFOG00000014275	-	89	95.732	Poecilia_formosa
ENSHBUG00000016325	-	100	99.704	ENSPNYG00000001220	-	100	99.704	Pundamilia_nyererei
ENSHBUG00000016325	-	87	76.106	ENSPNAG00000010663	-	97	61.120	Pygocentrus_nattereri
ENSHBUG00000016325	-	100	77.974	ENSTRUG00000010240	-	100	78.855	Takifugu_rubripes