EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016335 (Gene tree)
Gene ID: 102294760
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 11780 bases
Position: chrJH425420.1:106039-117818
Accession: 102294760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000030951	MMR_HSR1	PF01926.23	5e-06	1	1
ENSHBUP00000014406	MMR_HSR1	PF01926.23	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033371	-	3914	XM_014335618	ENSHBUP00000030951	664 (aa)	XP_014191104	-
ENSHBUT00000022390	-	1863	-	ENSHBUP00000014406	620 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000016335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016335	zgc:162879	76	63.687	ENSHBUG00000010345	rasef	68	63.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016335	zgc:162879	99	81.942	ENSAPOG00000008539	zgc:162879	99	81.942	Acanthochromis_polyacanthus
ENSHBUG00000016335	zgc:162879	100	89.910	ENSACIG00000023717	zgc:162879	100	89.910	Amphilophus_citrinellus
ENSHBUG00000016335	zgc:162879	85	79.012	ENSAOCG00000006210	zgc:162879	88	79.012	Amphiprion_ocellaris
ENSHBUG00000016335	zgc:162879	99	82.094	ENSAPEG00000017489	zgc:162879	99	82.094	Amphiprion_percula
ENSHBUG00000016335	zgc:162879	100	84.060	ENSATEG00000006102	zgc:162879	100	84.060	Anabas_testudineus
ENSHBUG00000016335	zgc:162879	100	99.699	ENSACLG00000021066	zgc:162879	97	99.699	Astatotilapia_calliptera
ENSHBUG00000016335	zgc:162879	100	62.556	ENSAMXG00000007430	zgc:162879	100	62.556	Astyanax_mexicanus
ENSHBUG00000016335	zgc:162879	85	61.796	ENSCSEG00000013699	zgc:162879	92	61.796	Cynoglossus_semilaevis
ENSHBUG00000016335	zgc:162879	99	73.795	ENSCVAG00000014510	zgc:162879	99	73.795	Cyprinodon_variegatus
ENSHBUG00000016335	zgc:162879	100	61.919	ENSDARG00000074163	zgc:162879	100	61.919	Danio_rerio
ENSHBUG00000016335	zgc:162879	99	58.121	ENSELUG00000019483	zgc:162879	97	64.696	Esox_lucius
ENSHBUG00000016335	zgc:162879	76	69.822	ENSFHEG00000022549	zgc:162879	100	69.822	Fundulus_heteroclitus
ENSHBUG00000016335	zgc:162879	100	72.180	ENSGAFG00000001313	zgc:162879	100	72.180	Gambusia_affinis
ENSHBUG00000016335	zgc:162879	100	74.747	ENSGACG00000010798	zgc:162879	99	74.315	Gasterosteus_aculeatus
ENSHBUG00000016335	zgc:162879	100	52.866	ENSHCOG00000012026	zgc:162879	99	58.525	Hippocampus_comes
ENSHBUG00000016335	zgc:162879	100	67.820	ENSKMAG00000016246	zgc:162879	100	67.218	Kryptolebias_marmoratus
ENSHBUG00000016335	zgc:162879	99	76.391	ENSLBEG00000006690	zgc:162879	100	76.391	Labrus_bergylta
ENSHBUG00000016335	zgc:162879	96	58.644	ENSLACG00000014082	-	88	58.305	Latimeria_chalumnae
ENSHBUG00000016335	zgc:162879	99	58.754	ENSLOCG00000014347	zgc:162879	98	58.754	Lepisosteus_oculatus
ENSHBUG00000016335	zgc:162879	100	79.819	ENSMAMG00000008875	zgc:162879	100	79.819	Mastacembelus_armatus
ENSHBUG00000016335	zgc:162879	100	99.548	ENSMZEG00005022256	zgc:162879	100	99.548	Maylandia_zebra
ENSHBUG00000016335	zgc:162879	100	87.651	ENSNBRG00000020110	zgc:162879	100	87.651	Neolamprologus_brichardi
ENSHBUG00000016335	zgc:162879	99	90.714	ENSONIG00000015165	zgc:162879	100	90.714	Oreochromis_niloticus
ENSHBUG00000016335	zgc:162879	99	68.271	ENSORLG00015017960	zgc:162879	99	68.271	Oryzias_latipes_hsok
ENSHBUG00000016335	zgc:162879	100	57.508	ENSPKIG00000020661	zgc:162879	100	57.357	Paramormyrops_kingsleyae
ENSHBUG00000016335	zgc:162879	100	71.084	ENSPFOG00000006354	zgc:162879	99	71.084	Poecilia_formosa
ENSHBUG00000016335	zgc:162879	100	70.934	ENSPLAG00000020643	zgc:162879	99	70.934	Poecilia_latipinna
ENSHBUG00000016335	zgc:162879	100	70.633	ENSPMEG00000014713	zgc:162879	100	70.633	Poecilia_mexicana
ENSHBUG00000016335	zgc:162879	100	94.155	ENSPNYG00000010530	zgc:162879	100	94.155	Pundamilia_nyererei
ENSHBUG00000016335	zgc:162879	100	61.573	ENSPNAG00000012022	zgc:162879	100	61.573	Pygocentrus_nattereri
ENSHBUG00000016335	zgc:162879	90	47.182	ENSSFOG00015023774	zgc:162879	97	47.182	Scleropages_formosus
ENSHBUG00000016335	zgc:162879	100	76.541	ENSSMAG00000001513	zgc:162879	99	76.704	Scophthalmus_maximus
ENSHBUG00000016335	zgc:162879	100	84.361	ENSSDUG00000011478	zgc:162879	100	84.361	Seriola_dumerili
ENSHBUG00000016335	zgc:162879	100	84.211	ENSSLDG00000000877	zgc:162879	100	84.211	Seriola_lalandi_dorsalis
ENSHBUG00000016335	zgc:162879	99	75.721	ENSSPAG00000010598	zgc:162879	99	75.721	Stegastes_partitus
ENSHBUG00000016335	zgc:162879	99	69.078	ENSTNIG00000019239	zgc:162879	99	69.078	Tetraodon_nigroviridis
ENSHBUG00000016335	zgc:162879	99	41.864	ENSXETG00000015491	rasef	98	41.307	Xenopus_tropicalis
ENSHBUG00000016335	zgc:162879	77	67.191	ENSXCOG00000020244	zgc:162879	100	67.191	Xiphophorus_couchianus
ENSHBUG00000016335	zgc:162879	100	72.632	ENSXMAG00000002846	zgc:162879	100	72.632	Xiphophorus_maculatus