EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016412 (Gene tree)
Gene ID: 102307258
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 7306 bases
Position: chrJH425325.1:1663396-1670701
Accession: 102307258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014551	MTS	PF05175.14	4.2e-06	1	1
ENSHBUP00000014551	Met_10	PF02475.16	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022562	-	6137	XM_005913493	ENSHBUP00000014551	401 (aa)	XP_005913555	UPI0003BC8045

Gene Model

Click here to download ENSHBUG00000016412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016412	trmt12	96	50.121	ENSG00000183665	TRMT12	92	50.121	Homo_sapiens
ENSHBUG00000016412	trmt12	100	79.052	ENSAPOG00000011979	trmt12	100	79.052	Acanthochromis_polyacanthus
ENSHBUG00000016412	trmt12	96	50.239	ENSAMEG00000019612	TRMT12	92	50.239	Ailuropoda_melanoleuca
ENSHBUG00000016412	trmt12	96	85.117	ENSACIG00000012982	trmt12	100	85.117	Amphilophus_citrinellus
ENSHBUG00000016412	trmt12	100	80.549	ENSAOCG00000020570	trmt12	99	82.058	Amphiprion_ocellaris
ENSHBUG00000016412	trmt12	100	80.549	ENSAPEG00000006335	trmt12	99	82.058	Amphiprion_percula
ENSHBUG00000016412	trmt12	100	77.531	ENSATEG00000018316	trmt12	100	77.531	Anabas_testudineus
ENSHBUG00000016412	trmt12	100	98.753	ENSACLG00000001008	trmt12	100	98.753	Astatotilapia_calliptera
ENSHBUG00000016412	trmt12	99	56.667	ENSAMXG00000040366	trmt12	99	56.667	Astyanax_mexicanus
ENSHBUG00000016412	trmt12	96	49.515	ENSBTAG00000020398	TRMT12	89	49.515	Bos_taurus
ENSHBUG00000016412	trmt12	96	48.426	ENSCJAG00000022174	TRMT12	92	48.426	Callithrix_jacchus
ENSHBUG00000016412	trmt12	96	50.605	ENSCAFG00000001040	TRMT12	94	50.605	Canis_familiaris
ENSHBUG00000016412	trmt12	96	50.605	ENSCAFG00020006500	TRMT12	94	50.605	Canis_lupus_dingo
ENSHBUG00000016412	trmt12	96	49.757	ENSCHIG00000016574	TRMT12	94	49.757	Capra_hircus
ENSHBUG00000016412	trmt12	97	50.365	ENSCPOG00000026520	TRMT12	93	50.365	Cavia_porcellus
ENSHBUG00000016412	trmt12	96	49.879	ENSCSAG00000018615	TRMT12	92	49.879	Chlorocebus_sabaeus
ENSHBUG00000016412	trmt12	97	51.059	ENSCPBG00000014290	TRMT12	93	51.059	Chrysemys_picta_bellii
ENSHBUG00000016412	trmt12	71	47.766	ENSCING00000019633	-	97	47.766	Ciona_intestinalis
ENSHBUG00000016412	trmt12	72	49.485	ENSCSAVG00000000415	-	92	49.485	Ciona_savignyi
ENSHBUG00000016412	trmt12	97	48.750	ENSCGRG00001014834	Trmt12	95	48.750	Cricetulus_griseus_chok1gshd
ENSHBUG00000016412	trmt12	99	68.382	ENSCSEG00000002675	trmt12	95	68.382	Cynoglossus_semilaevis
ENSHBUG00000016412	trmt12	100	72.070	ENSCVAG00000005590	trmt12	100	72.070	Cyprinodon_variegatus
ENSHBUG00000016412	trmt12	99	58.394	ENSDARG00000060338	trmt12	99	58.511	Danio_rerio
ENSHBUG00000016412	trmt12	96	48.184	ENSETEG00000009373	TRMT12	92	48.184	Echinops_telfairi
ENSHBUG00000016412	trmt12	96	50.363	ENSEASG00005022441	TRMT12	94	50.363	Equus_asinus_asinus
ENSHBUG00000016412	trmt12	97	49.637	ENSEEUG00000004844	TRMT12	93	49.637	Erinaceus_europaeus
ENSHBUG00000016412	trmt12	99	65.025	ENSELUG00000004240	trmt12	99	66.667	Esox_lucius
ENSHBUG00000016412	trmt12	64	59.075	ENSFALG00000003825	TRMT12	93	66.667	Ficedula_albicollis
ENSHBUG00000016412	trmt12	96	50.363	ENSFDAG00000016647	TRMT12	94	50.363	Fukomys_damarensis
ENSHBUG00000016412	trmt12	93	64.894	ENSFHEG00000017338	trmt12	96	64.894	Fundulus_heteroclitus
ENSHBUG00000016412	trmt12	82	55.682	ENSGALG00000006773	TRMT12	77	55.682	Gallus_gallus
ENSHBUG00000016412	trmt12	100	73.201	ENSGAFG00000020056	trmt12	100	73.201	Gambusia_affinis
ENSHBUG00000016412	trmt12	96	74.674	ENSGACG00000017351	trmt12	99	74.674	Gasterosteus_aculeatus
ENSHBUG00000016412	trmt12	97	52.370	ENSGAGG00000006032	TRMT12	95	52.370	Gopherus_agassizii
ENSHBUG00000016412	trmt12	96	48.792	ENSHGLG00000020498	TRMT12	94	48.792	Heterocephalus_glaber_female
ENSHBUG00000016412	trmt12	96	49.034	ENSHGLG00100020132	TRMT12	94	49.034	Heterocephalus_glaber_male
ENSHBUG00000016412	trmt12	100	69.727	ENSHCOG00000005050	trmt12	95	75.305	Hippocampus_comes
ENSHBUG00000016412	trmt12	99	55.854	ENSIPUG00000018011	trmt12	92	55.854	Ictalurus_punctatus
ENSHBUG00000016412	trmt12	97	48.926	ENSSTOG00000030617	TRMT12	94	48.926	Ictidomys_tridecemlineatus
ENSHBUG00000016412	trmt12	99	75.373	ENSKMAG00000000891	trmt12	99	75.373	Kryptolebias_marmoratus
ENSHBUG00000016412	trmt12	100	68.966	ENSLBEG00000028712	trmt12	100	68.966	Labrus_bergylta
ENSHBUG00000016412	trmt12	53	75.688	ENSLBEG00000017456	-	89	75.688	Labrus_bergylta
ENSHBUG00000016412	trmt12	97	51.069	ENSLACG00000015869	TRMT12	94	51.069	Latimeria_chalumnae
ENSHBUG00000016412	trmt12	99	55.911	ENSLOCG00000015290	trmt12	99	55.911	Lepisosteus_oculatus
ENSHBUG00000016412	trmt12	96	50.605	ENSLAFG00000012519	TRMT12	94	50.605	Loxodonta_africana
ENSHBUG00000016412	trmt12	96	49.395	ENSMMUG00000015490	TRMT12	93	49.395	Macaca_mulatta
ENSHBUG00000016412	trmt12	99	73.020	ENSMAMG00000020311	trmt12	99	73.020	Mastacembelus_armatus
ENSHBUG00000016412	trmt12	100	98.504	ENSMZEG00005007349	trmt12	100	98.504	Maylandia_zebra
ENSHBUG00000016412	trmt12	99	50.827	ENSMGAG00000004174	TRMT12	95	50.827	Meleagris_gallopavo
ENSHBUG00000016412	trmt12	99	72.525	ENSMMOG00000000412	trmt12	99	72.525	Mola_mola
ENSHBUG00000016412	trmt12	98	49.386	ENSMODG00000011798	-	85	49.386	Monodelphis_domestica
ENSHBUG00000016412	trmt12	96	50.250	ENSMODG00000021403	-	92	50.250	Monodelphis_domestica
ENSHBUG00000016412	trmt12	100	76.049	ENSMALG00000008668	trmt12	100	76.049	Monopterus_albus
ENSHBUG00000016412	trmt12	96	50.000	MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	Mus_caroli
ENSHBUG00000016412	trmt12	96	50.485	ENSMUSG00000037085	Trmt12	92	50.485	Mus_musculus
ENSHBUG00000016412	trmt12	96	51.456	MGP_PahariEiJ_G0019829	Trmt12	93	51.456	Mus_pahari
ENSHBUG00000016412	trmt12	96	50.000	MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	Mus_spretus
ENSHBUG00000016412	trmt12	96	50.725	ENSMPUG00000019150	TRMT12	93	50.725	Mustela_putorius_furo
ENSHBUG00000016412	trmt12	96	49.395	ENSMLUG00000003753	TRMT12	94	49.395	Myotis_lucifugus
ENSHBUG00000016412	trmt12	97	48.551	ENSNGAG00000014548	Trmt12	95	48.551	Nannospalax_galili
ENSHBUG00000016412	trmt12	100	94.527	ENSNBRG00000021510	trmt12	100	94.527	Neolamprologus_brichardi
ENSHBUG00000016412	trmt12	96	46.117	ENSOPRG00000008067	TRMT12	92	46.117	Ochotona_princeps
ENSHBUG00000016412	trmt12	96	50.363	ENSODEG00000018933	TRMT12	94	50.363	Octodon_degus
ENSHBUG00000016412	trmt12	100	96.509	ENSONIG00000002614	trmt12	100	96.509	Oreochromis_niloticus
ENSHBUG00000016412	trmt12	96	46.437	ENSOANG00000009987	TRMT12	95	46.437	Ornithorhynchus_anatinus
ENSHBUG00000016412	trmt12	96	45.894	ENSOCUG00000026379	TRMT12	92	45.894	Oryctolagus_cuniculus
ENSHBUG00000016412	trmt12	100	72.569	ENSORLG00000001280	trmt12	100	72.569	Oryzias_latipes
ENSHBUG00000016412	trmt12	100	72.070	ENSORLG00020000708	trmt12	100	72.070	Oryzias_latipes_hni
ENSHBUG00000016412	trmt12	100	71.820	ENSORLG00015012344	trmt12	100	71.820	Oryzias_latipes_hsok
ENSHBUG00000016412	trmt12	100	71.072	ENSOMEG00000015267	trmt12	98	71.072	Oryzias_melastigma
ENSHBUG00000016412	trmt12	97	49.517	ENSOGAG00000015845	TRMT12	94	49.517	Otolemur_garnettii
ENSHBUG00000016412	trmt12	99	60.396	ENSPKIG00000004640	trmt12	99	60.769	Paramormyrops_kingsleyae
ENSHBUG00000016412	trmt12	58	59.480	ENSPSIG00000003476	TRMT12	99	59.480	Pelodiscus_sinensis
ENSHBUG00000016412	trmt12	99	62.871	ENSPMGG00000016356	trmt12	97	62.871	Periophthalmus_magnuspinnatus
ENSHBUG00000016412	trmt12	96	51.500	ENSPCIG00000002967	TRMT12	85	51.500	Phascolarctos_cinereus
ENSHBUG00000016412	trmt12	96	73.316	ENSPFOG00000016931	trmt12	94	73.316	Poecilia_formosa
ENSHBUG00000016412	trmt12	100	72.388	ENSPLAG00000020621	trmt12	100	72.388	Poecilia_latipinna
ENSHBUG00000016412	trmt12	100	74.129	ENSPMEG00000000818	trmt12	100	74.129	Poecilia_mexicana
ENSHBUG00000016412	trmt12	100	73.881	ENSPREG00000011621	trmt12	100	74.378	Poecilia_reticulata
ENSHBUG00000016412	trmt12	96	49.879	ENSPPYG00000018866	TRMT12	92	49.879	Pongo_abelii
ENSHBUG00000016412	trmt12	97	49.275	ENSPCAG00000000556	TRMT12	93	49.275	Procavia_capensis
ENSHBUG00000016412	trmt12	96	49.637	ENSPVAG00000009149	TRMT12	93	49.637	Pteropus_vampyrus
ENSHBUG00000016412	trmt12	96	97.389	ENSPNYG00000010696	trmt12	100	97.389	Pundamilia_nyererei
ENSHBUG00000016412	trmt12	99	55.847	ENSPNAG00000019028	trmt12	99	55.847	Pygocentrus_nattereri
ENSHBUG00000016412	trmt12	96	51.214	ENSRNOG00000008978	Trmt12	94	51.214	Rattus_norvegicus
ENSHBUG00000016412	trmt12	96	50.000	ENSSHAG00000003345	TRMT12	92	50.000	Sarcophilus_harrisii
ENSHBUG00000016412	trmt12	99	56.010	ENSSFOG00015006090	trmt12	99	56.010	Scleropages_formosus
ENSHBUG00000016412	trmt12	99	76.238	ENSSMAG00000013247	trmt12	99	76.238	Scophthalmus_maximus
ENSHBUG00000016412	trmt12	100	77.778	ENSSDUG00000006168	trmt12	100	77.778	Seriola_dumerili
ENSHBUG00000016412	trmt12	100	78.272	ENSSLDG00000025007	trmt12	100	78.272	Seriola_lalandi_dorsalis
ENSHBUG00000016412	trmt12	97	52.844	ENSSPUG00000005321	TRMT12	93	52.844	Sphenodon_punctatus
ENSHBUG00000016412	trmt12	100	81.047	ENSSPAG00000009435	trmt12	97	81.047	Stegastes_partitus
ENSHBUG00000016412	trmt12	99	49.161	ENSTGUG00000002280	TRMT12	99	50.000	Taeniopygia_guttata
ENSHBUG00000016412	trmt12	99	67.742	ENSTRUG00000011548	trmt12	99	67.742	Takifugu_rubripes
ENSHBUG00000016412	trmt12	99	65.594	ENSTNIG00000016866	trmt12	99	65.594	Tetraodon_nigroviridis
ENSHBUG00000016412	trmt12	96	51.090	ENSUAMG00000002067	TRMT12	95	51.090	Ursus_americanus
ENSHBUG00000016412	trmt12	96	50.847	ENSVPAG00000006519	TRMT12	93	50.847	Vicugna_pacos
ENSHBUG00000016412	trmt12	98	49.522	ENSVVUG00000016790	TRMT12	93	49.522	Vulpes_vulpes
ENSHBUG00000016412	trmt12	99	51.880	ENSXETG00000009641	trmt12	95	51.880	Xenopus_tropicalis
ENSHBUG00000016412	trmt12	100	73.086	ENSXCOG00000016505	trmt12	100	73.086	Xiphophorus_couchianus
ENSHBUG00000016412	trmt12	100	73.515	ENSXMAG00000025318	trmt12	100	73.515	Xiphophorus_maculatus