EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016502 (Gene tree)
Gene ID: 102307171
Gene Symbol: -
Alias: -
Full Name: GDNF-inducible zinc finger protein 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4839 bases
Position: chrJH425341.1:2365580-2370418
Accession: 102307171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	1	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	2	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	3	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	4	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	5	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	6	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	7	8
ENSHBUP00000031045	zf-C2H2	PF00096.26	2.1e-39	8	8
ENSHBUP00000031045	zf-met	PF12874.7	6.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022651	-	2484	XM_005917716	ENSHBUP00000031045	827 (aa)	XP_005917778	UPI0003BD926A

Gene Model

Click here to download ENSHBUG00000016502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016502	-	72	45.128	ENSHBUG00000012654	zbtb24	64	45.128
ENSHBUG00000016502	-	71	33.503	ENSHBUG00000016619	zbtb47b	89	31.250
ENSHBUG00000016502	-	63	43.636	ENSHBUG00000009837	znf236	67	43.636
ENSHBUG00000016502	-	72	37.838	ENSHBUG00000011090	ZBTB14	98	37.838
ENSHBUG00000016502	-	53	37.931	ENSHBUG00000004840	znf646	72	37.931
ENSHBUG00000016502	-	51	31.557	ENSHBUG00000017445	zbtb41	63	31.557
ENSHBUG00000016502	-	70	38.961	ENSHBUG00000014899	zbtb34	82	38.961
ENSHBUG00000016502	-	53	31.527	ENSHBUG00000018577	PRDM15	64	31.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016502	-	72	72.408	ENSAPOG00000012930	GZF1	95	72.373	Acanthochromis_polyacanthus
ENSHBUG00000016502	-	98	79.484	ENSACIG00000004753	-	99	79.853	Amphilophus_citrinellus
ENSHBUG00000016502	-	70	74.390	ENSAOCG00000024275	GZF1	92	73.519	Amphiprion_ocellaris
ENSHBUG00000016502	-	97	74.601	ENSAPEG00000017195	GZF1	96	74.724	Amphiprion_percula
ENSHBUG00000016502	-	85	64.050	ENSATEG00000018374	GZF1	88	81.735	Anabas_testudineus
ENSHBUG00000016502	-	100	97.855	ENSACLG00000025866	GZF1	100	97.855	Astatotilapia_calliptera
ENSHBUG00000016502	-	96	45.351	ENSAMXG00000017178	GZF1	94	45.351	Astyanax_mexicanus
ENSHBUG00000016502	-	51	70.569	ENSCJAG00000000733	GZF1	60	69.967	Callithrix_jacchus
ENSHBUG00000016502	-	77	47.759	ENSCAFG00000005142	GZF1	89	47.913	Canis_familiaris
ENSHBUG00000016502	-	54	66.361	ENSTSYG00000028054	GZF1	89	46.519	Carlito_syrichta
ENSHBUG00000016502	-	76	47.243	ENSCAPG00000002173	GZF1	89	47.243	Cavia_aperea
ENSHBUG00000016502	-	76	47.243	ENSCPOG00000010790	GZF1	89	47.243	Cavia_porcellus
ENSHBUG00000016502	-	53	68.254	ENSCCAG00000035601	GZF1	62	67.712	Cebus_capucinus
ENSHBUG00000016502	-	86	43.197	ENSCLAG00000014714	GZF1	99	42.781	Chinchilla_lanigera
ENSHBUG00000016502	-	58	49.536	ENSCPBG00000023418	-	67	45.524	Chrysemys_picta_bellii
ENSHBUG00000016502	-	73	46.805	ENSCGRG00001003944	Gzf1	87	47.049	Cricetulus_griseus_chok1gshd
ENSHBUG00000016502	-	73	46.805	ENSCGRG00000012721	Gzf1	87	47.049	Cricetulus_griseus_crigri
ENSHBUG00000016502	-	98	61.310	ENSCSEG00000002270	GZF1	96	61.310	Cynoglossus_semilaevis
ENSHBUG00000016502	-	99	60.341	ENSCVAG00000013068	-	97	61.566	Cyprinodon_variegatus
ENSHBUG00000016502	-	74	51.636	ENSELUG00000013581	GZF1	88	52.182	Esox_lucius
ENSHBUG00000016502	-	86	44.701	ENSFCAG00000006484	GZF1	99	44.715	Felis_catus
ENSHBUG00000016502	-	83	43.852	ENSFDAG00000019468	GZF1	99	43.443	Fukomys_damarensis
ENSHBUG00000016502	-	98	61.192	ENSFHEG00000020498	GZF1	99	61.922	Fundulus_heteroclitus
ENSHBUG00000016502	-	73	62.114	ENSGMOG00000011017	GZF1	100	61.588	Gadus_morhua
ENSHBUG00000016502	-	99	63.049	ENSGAFG00000008725	GZF1	97	63.049	Gambusia_affinis
ENSHBUG00000016502	-	73	71.336	ENSGACG00000012415	GZF1	99	87.245	Gasterosteus_aculeatus
ENSHBUG00000016502	-	64	56.479	ENSHGLG00000008891	GZF1	71	56.479	Heterocephalus_glaber_female
ENSHBUG00000016502	-	64	56.479	ENSHGLG00100015117	GZF1	71	56.479	Heterocephalus_glaber_male
ENSHBUG00000016502	-	99	51.030	ENSHCOG00000004326	GZF1	98	50.602	Hippocampus_comes
ENSHBUG00000016502	-	80	68.000	ENSKMAG00000001453	-	97	80.000	Kryptolebias_marmoratus
ENSHBUG00000016502	-	99	69.073	ENSLBEG00000025803	-	98	69.073	Labrus_bergylta
ENSHBUG00000016502	-	99	69.388	ENSMAMG00000011931	-	98	69.388	Mastacembelus_armatus
ENSHBUG00000016502	-	100	98.800	ENSMZEG00005010711	-	100	98.800	Maylandia_zebra
ENSHBUG00000016502	-	72	47.360	ENSMAUG00000019656	Gzf1	100	47.611	Mesocricetus_auratus
ENSHBUG00000016502	-	79	45.617	ENSMOCG00000017816	Gzf1	92	46.074	Microtus_ochrogaster
ENSHBUG00000016502	-	94	65.461	ENSMMOG00000004395	-	98	66.667	Mola_mola
ENSHBUG00000016502	-	75	47.450	ENSMODG00000006238	GZF1	100	65.385	Monodelphis_domestica
ENSHBUG00000016502	-	51	54.374	MGP_CAROLIEiJ_G0024409	Gzf1	99	42.576	Mus_caroli
ENSHBUG00000016502	-	88	42.373	ENSMUSG00000027439	Gzf1	99	42.536	Mus_musculus
ENSHBUG00000016502	-	88	42.373	MGP_SPRETEiJ_G0025327	Gzf1	99	42.536	Mus_spretus
ENSHBUG00000016502	-	75	44.444	ENSMLUG00000002194	GZF1	90	45.497	Myotis_lucifugus
ENSHBUG00000016502	-	76	47.939	ENSNGAG00000024012	Gzf1	89	48.250	Nannospalax_galili
ENSHBUG00000016502	-	72	87.227	ENSNBRG00000019987	GZF1	98	87.563	Neolamprologus_brichardi
ENSHBUG00000016502	-	73	92.282	ENSONIG00000000989	GZF1	100	92.447	Oreochromis_niloticus
ENSHBUG00000016502	-	53	67.192	ENSOCUG00000025214	GZF1	87	47.205	Oryctolagus_cuniculus
ENSHBUG00000016502	-	99	62.424	ENSORLG00000010006	-	99	62.954	Oryzias_latipes
ENSHBUG00000016502	-	99	62.257	ENSORLG00020001395	-	99	62.667	Oryzias_latipes_hni
ENSHBUG00000016502	-	99	62.182	ENSORLG00015015364	GZF1	99	62.712	Oryzias_latipes_hsok
ENSHBUG00000016502	-	77	47.568	ENSOGAG00000028389	GZF1	89	47.568	Otolemur_garnettii
ENSHBUG00000016502	-	77	47.095	ENSPPRG00000010040	GZF1	99	44.932	Panthera_pardus
ENSHBUG00000016502	-	86	44.293	ENSPTIG00000019328	GZF1	99	44.580	Panthera_tigris_altaica
ENSHBUG00000016502	-	91	47.903	ENSPKIG00000003781	GZF1	93	48.000	Paramormyrops_kingsleyae
ENSHBUG00000016502	-	75	49.405	ENSPSIG00000014208	-	57	44.604	Pelodiscus_sinensis
ENSHBUG00000016502	-	79	67.511	ENSPMGG00000003778	-	96	48.664	Periophthalmus_magnuspinnatus
ENSHBUG00000016502	-	51	53.428	ENSPEMG00000011285	Gzf1	99	41.722	Peromyscus_maniculatus_bairdii
ENSHBUG00000016502	-	85	43.925	ENSPCIG00000013803	GZF1	99	44.459	Phascolarctos_cinereus
ENSHBUG00000016502	-	99	63.216	ENSPFOG00000002393	GZF1	100	65.074	Poecilia_formosa
ENSHBUG00000016502	-	99	56.263	ENSPLAG00000005232	GZF1	94	66.992	Poecilia_latipinna
ENSHBUG00000016502	-	99	56.879	ENSPMEG00000020017	-	97	57.495	Poecilia_mexicana
ENSHBUG00000016502	-	99	55.489	ENSPREG00000016398	GZF1	97	56.348	Poecilia_reticulata
ENSHBUG00000016502	-	53	68.038	ENSPPYG00000010766	GZF1	70	68.038	Pongo_abelii
ENSHBUG00000016502	-	62	99.427	ENSPNYG00000000788	-	92	99.427	Pundamilia_nyererei
ENSHBUG00000016502	-	88	42.428	ENSRNOG00000004735	Gzf1	99	43.303	Rattus_norvegicus
ENSHBUG00000016502	-	96	45.631	ENSSFOG00015008631	gzf1	88	47.089	Scleropages_formosus
ENSHBUG00000016502	-	99	74.636	ENSSDUG00000008186	GZF1	97	74.636	Seriola_dumerili
ENSHBUG00000016502	-	99	74.636	ENSSLDG00000002382	GZF1	97	74.636	Seriola_lalandi_dorsalis
ENSHBUG00000016502	-	55	69.536	ENSSARG00000010285	GZF1	61	69.536	Sorex_araneus
ENSHBUG00000016502	-	73	37.423	ENSSPUG00000004147	GZF1	86	44.444	Sphenodon_punctatus
ENSHBUG00000016502	-	99	71.719	ENSSPAG00000011759	GZF1	96	71.534	Stegastes_partitus
ENSHBUG00000016502	-	98	61.985	ENSTRUG00000006128	-	97	62.257	Takifugu_rubripes
ENSHBUG00000016502	-	73	64.580	ENSTNIG00000010722	GZF1	100	64.415	Tetraodon_nigroviridis
ENSHBUG00000016502	-	77	46.280	ENSTTRG00000011345	GZF1	89	46.746	Tursiops_truncatus
ENSHBUG00000016502	-	77	47.024	ENSUMAG00000004065	GZF1	89	47.015	Ursus_maritimus
ENSHBUG00000016502	-	77	47.759	ENSVVUG00000012086	GZF1	89	47.913	Vulpes_vulpes
ENSHBUG00000016502	-	85	41.375	ENSXETG00000004510	gzf1	99	41.245	Xenopus_tropicalis
ENSHBUG00000016502	-	99	63.869	ENSXMAG00000023249	GZF1	98	63.869	Xiphophorus_maculatus