EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016624 (Gene tree)
Gene ID: 102311752
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 19010 bases
Position: chrJH425670.1:251330-270339
Accession: 102311752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014696	RRM_1	PF00076.22	3.7e-05	1	1
ENSHBUP00000031106	RRM_1	PF00076.22	3.9e-05	1	1
ENSHBUP00000031121	RRM_1	PF00076.22	4.1e-05	1	1
ENSHBUP00000031106	G-patch	PF01585.23	4.6e-13	1	1
ENSHBUP00000014696	G-patch	PF01585.23	4.7e-13	1	1
ENSHBUP00000031121	G-patch	PF01585.23	4.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022776	-	1668	XM_005942686	ENSHBUP00000031121	418 (aa)	XP_005942748	UPI0003BC8A69
ENSHBUT00000022772	-	1591	XM_005942689	ENSHBUP00000031106	403 (aa)	XP_005942751	UPI000329D98F
ENSHBUT00000033479	-	1194	-	ENSHBUP00000014696	397 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000016624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016624	rbm17	100	83.292	ENSG00000134453	RBM17	100	83.292	Homo_sapiens
ENSHBUG00000016624	rbm17	99	96.500	ENSAPOG00000007101	rbm17	99	96.500	Acanthochromis_polyacanthus
ENSHBUG00000016624	rbm17	100	83.538	ENSAMEG00000002107	RBM17	100	83.538	Ailuropoda_melanoleuca
ENSHBUG00000016624	rbm17	100	95.309	ENSACIG00000006251	rbm17	100	95.309	Amphilophus_citrinellus
ENSHBUG00000016624	rbm17	100	96.535	ENSAOCG00000014892	rbm17	100	96.535	Amphiprion_ocellaris
ENSHBUG00000016624	rbm17	100	96.535	ENSAPEG00000022779	rbm17	100	96.535	Amphiprion_percula
ENSHBUG00000016624	rbm17	100	93.112	ENSATEG00000004406	rbm17	100	93.112	Anabas_testudineus
ENSHBUG00000016624	rbm17	100	84.521	ENSAPLG00000004190	RBM17	100	84.521	Anas_platyrhynchos
ENSHBUG00000016624	rbm17	89	81.117	ENSACAG00000005418	RBM17	99	81.117	Anolis_carolinensis
ENSHBUG00000016624	rbm17	100	72.616	ENSANAG00000019330	-	95	87.069	Aotus_nancymaae
ENSHBUG00000016624	rbm17	100	83.784	ENSANAG00000030127	RBM17	98	88.430	Aotus_nancymaae
ENSHBUG00000016624	rbm17	100	100.000	ENSACLG00000003928	rbm17	100	100.000	Astatotilapia_calliptera
ENSHBUG00000016624	rbm17	100	84.360	ENSAMXG00000005853	rbm17	100	85.782	Astyanax_mexicanus
ENSHBUG00000016624	rbm17	100	82.310	ENSBTAG00000011094	-	100	82.310	Bos_taurus
ENSHBUG00000016624	rbm17	100	83.538	ENSBTAG00000021951	RBM17	100	83.538	Bos_taurus
ENSHBUG00000016624	rbm17	97	32.117	WBGene00010233	F58B3.7	97	31.630	Caenorhabditis_elegans
ENSHBUG00000016624	rbm17	100	83.784	ENSCJAG00000020573	RBM17	100	83.784	Callithrix_jacchus
ENSHBUG00000016624	rbm17	100	83.538	ENSCAFG00000005206	RBM17	100	83.538	Canis_familiaris
ENSHBUG00000016624	rbm17	100	80.653	ENSCAFG00020005420	RBM17	100	80.653	Canis_lupus_dingo
ENSHBUG00000016624	rbm17	100	81.327	ENSCHIG00000019921	-	100	81.327	Capra_hircus
ENSHBUG00000016624	rbm17	100	83.538	ENSCHIG00000023204	-	100	83.538	Capra_hircus
ENSHBUG00000016624	rbm17	100	82.927	ENSTSYG00000001165	RBM17	99	89.831	Carlito_syrichta
ENSHBUG00000016624	rbm17	96	64.103	ENSCAPG00000006275	RBM17	100	68.508	Cavia_aperea
ENSHBUG00000016624	rbm17	100	79.800	ENSCPOG00000005679	RBM17	100	78.973	Cavia_porcellus
ENSHBUG00000016624	rbm17	100	83.784	ENSCCAG00000018655	RBM17	98	88.430	Cebus_capucinus
ENSHBUG00000016624	rbm17	100	83.292	ENSCATG00000041566	RBM17	97	89.167	Cercocebus_atys
ENSHBUG00000016624	rbm17	100	82.683	ENSCLAG00000012195	RBM17	99	82.683	Chinchilla_lanigera
ENSHBUG00000016624	rbm17	100	83.292	ENSCSAG00000013564	RBM17	100	83.292	Chlorocebus_sabaeus
ENSHBUG00000016624	rbm17	92	66.223	ENSCHOG00000005131	RBM17	100	66.223	Choloepus_hoffmanni
ENSHBUG00000016624	rbm17	100	84.029	ENSCPBG00000019836	RBM17	100	84.029	Chrysemys_picta_bellii
ENSHBUG00000016624	rbm17	100	46.377	ENSCSAVG00000008782	-	100	45.255	Ciona_savignyi
ENSHBUG00000016624	rbm17	98	74.809	ENSCANG00000023715	-	99	74.809	Colobus_angolensis_palliatus
ENSHBUG00000016624	rbm17	100	83.047	ENSCANG00000030987	RBM17	97	89.167	Colobus_angolensis_palliatus
ENSHBUG00000016624	rbm17	100	66.256	ENSCGRG00001009256	-	100	65.025	Cricetulus_griseus_chok1gshd
ENSHBUG00000016624	rbm17	100	82.927	ENSCGRG00001013842	Rbm17	100	82.927	Cricetulus_griseus_chok1gshd
ENSHBUG00000016624	rbm17	100	82.927	ENSCGRG00000006907	Rbm17	100	82.927	Cricetulus_griseus_crigri
ENSHBUG00000016624	rbm17	100	88.333	ENSCSEG00000018164	rbm17	100	88.333	Cynoglossus_semilaevis
ENSHBUG00000016624	rbm17	100	88.413	ENSCVAG00000002476	rbm17	100	87.345	Cyprinodon_variegatus
ENSHBUG00000016624	rbm17	100	80.332	ENSDARG00000031346	rbm17	100	80.332	Danio_rerio
ENSHBUG00000016624	rbm17	100	83.292	ENSDNOG00000035920	RBM17	100	83.292	Dasypus_novemcinctus
ENSHBUG00000016624	rbm17	99	37.671	FBgn0086683	Spf45	99	37.029	Drosophila_melanogaster
ENSHBUG00000016624	rbm17	87	85.782	ENSETEG00000006642	RBM17	86	85.782	Echinops_telfairi
ENSHBUG00000016624	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSHBUG00000016624	rbm17	100	79.851	ENSEASG00005019205	-	100	79.602	Equus_asinus_asinus
ENSHBUG00000016624	rbm17	92	80.585	ENSEASG00005009236	-	100	80.585	Equus_asinus_asinus
ENSHBUG00000016624	rbm17	100	73.710	ENSECAG00000001379	-	100	73.710	Equus_caballus
ENSHBUG00000016624	rbm17	100	72.362	ENSECAG00000008939	RBM17	100	72.864	Equus_caballus
ENSHBUG00000016624	rbm17	86	66.286	ENSEEUG00000013077	RBM17	100	64.571	Erinaceus_europaeus
ENSHBUG00000016624	rbm17	100	86.014	ENSELUG00000006440	rbm17	100	86.014	Esox_lucius
ENSHBUG00000016624	rbm17	100	83.538	ENSFCAG00000031988	RBM17	100	83.538	Felis_catus
ENSHBUG00000016624	rbm17	100	83.538	ENSFALG00000001790	RBM17	100	83.538	Ficedula_albicollis
ENSHBUG00000016624	rbm17	100	82.683	ENSFDAG00000007470	RBM17	100	82.683	Fukomys_damarensis
ENSHBUG00000016624	rbm17	100	92.162	ENSFHEG00000001266	rbm17	100	90.680	Fundulus_heteroclitus
ENSHBUG00000016624	rbm17	99	82.734	ENSGMOG00000008438	rbm17	100	82.734	Gadus_morhua
ENSHBUG00000016624	rbm17	100	84.767	ENSGALG00000006332	RBM17	100	84.767	Gallus_gallus
ENSHBUG00000016624	rbm17	100	92.574	ENSGAFG00000019879	rbm17	100	92.574	Gambusia_affinis
ENSHBUG00000016624	rbm17	99	93.035	ENSGACG00000019174	rbm17	99	93.035	Gasterosteus_aculeatus
ENSHBUG00000016624	rbm17	100	84.029	ENSGAGG00000019906	RBM17	100	84.029	Gopherus_agassizii
ENSHBUG00000016624	rbm17	100	82.683	ENSHGLG00000011580	RBM17	100	82.683	Heterocephalus_glaber_female
ENSHBUG00000016624	rbm17	100	67.488	ENSHGLG00100010556	-	100	64.778	Heterocephalus_glaber_male
ENSHBUG00000016624	rbm17	100	82.683	ENSHGLG00100010460	RBM17	100	82.683	Heterocephalus_glaber_male
ENSHBUG00000016624	rbm17	99	89.688	ENSHCOG00000010865	rbm17	100	89.688	Hippocampus_comes
ENSHBUG00000016624	rbm17	100	76.179	ENSIPUG00000007699	Rbm17	100	80.929	Ictalurus_punctatus
ENSHBUG00000016624	rbm17	100	82.927	ENSSTOG00000013591	RBM17	100	82.927	Ictidomys_tridecemlineatus
ENSHBUG00000016624	rbm17	100	61.671	ENSJJAG00000000993	-	100	60.391	Jaculus_jaculus
ENSHBUG00000016624	rbm17	100	82.927	ENSJJAG00000022886	Rbm17	100	82.927	Jaculus_jaculus
ENSHBUG00000016624	rbm17	100	92.399	ENSKMAG00000021400	rbm17	100	92.399	Kryptolebias_marmoratus
ENSHBUG00000016624	rbm17	100	93.812	ENSLBEG00000000881	rbm17	100	92.399	Labrus_bergylta
ENSHBUG00000016624	rbm17	99	66.432	ENSLACG00000017297	RBM17	99	66.901	Latimeria_chalumnae
ENSHBUG00000016624	rbm17	100	84.559	ENSLOCG00000015659	rbm17	100	83.698	Lepisosteus_oculatus
ENSHBUG00000016624	rbm17	100	82.282	ENSLAFG00000011629	RBM17	100	82.282	Loxodonta_africana
ENSHBUG00000016624	rbm17	100	83.292	ENSMFAG00000035521	RBM17	97	89.167	Macaca_fascicularis
ENSHBUG00000016624	rbm17	100	83.292	ENSMMUG00000015152	RBM17	97	89.167	Macaca_mulatta
ENSHBUG00000016624	rbm17	100	83.292	ENSMNEG00000017264	RBM17	97	89.167	Macaca_nemestrina
ENSHBUG00000016624	rbm17	100	83.292	ENSMLEG00000029340	RBM17	97	89.167	Mandrillus_leucophaeus
ENSHBUG00000016624	rbm17	100	93.349	ENSMAMG00000000387	rbm17	100	93.349	Mastacembelus_armatus
ENSHBUG00000016624	rbm17	100	100.000	ENSMZEG00005015179	rbm17	100	100.000	Maylandia_zebra
ENSHBUG00000016624	rbm17	100	83.535	ENSMGAG00000003981	RBM17	100	83.535	Meleagris_gallopavo
ENSHBUG00000016624	rbm17	100	82.927	ENSMAUG00000019247	Rbm17	100	82.927	Mesocricetus_auratus
ENSHBUG00000016624	rbm17	100	82.683	ENSMICG00000003976	-	100	82.683	Microcebus_murinus
ENSHBUG00000016624	rbm17	100	76.812	ENSMICG00000041489	-	100	76.812	Microcebus_murinus
ENSHBUG00000016624	rbm17	93	66.316	ENSMOCG00000014517	-	99	66.053	Microtus_ochrogaster
ENSHBUG00000016624	rbm17	100	82.927	ENSMOCG00000011847	Rbm17	100	82.927	Microtus_ochrogaster
ENSHBUG00000016624	rbm17	100	85.575	ENSMMOG00000010264	rbm17	100	85.575	Mola_mola
ENSHBUG00000016624	rbm17	100	83.538	ENSMODG00000016648	RBM17	100	83.538	Monodelphis_domestica
ENSHBUG00000016624	rbm17	100	92.417	ENSMALG00000010597	rbm17	100	93.128	Monopterus_albus
ENSHBUG00000016624	rbm17	100	82.927	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.927	Mus_caroli
ENSHBUG00000016624	rbm17	100	82.927	ENSMUSG00000037197	Rbm17	100	82.927	Mus_musculus
ENSHBUG00000016624	rbm17	100	83.171	MGP_PahariEiJ_G0019233	Rbm17	100	83.171	Mus_pahari
ENSHBUG00000016624	rbm17	100	82.927	MGP_SPRETEiJ_G0024091	Rbm17	100	82.927	Mus_spretus
ENSHBUG00000016624	rbm17	86	81.714	ENSMPUG00000016359	RBM17	96	81.714	Mustela_putorius_furo
ENSHBUG00000016624	rbm17	100	81.265	ENSMLUG00000002302	-	100	81.265	Myotis_lucifugus
ENSHBUG00000016624	rbm17	100	78.870	ENSMLUG00000025709	-	100	77.641	Myotis_lucifugus
ENSHBUG00000016624	rbm17	100	82.927	ENSNGAG00000000741	Rbm17	100	82.927	Nannospalax_galili
ENSHBUG00000016624	rbm17	100	57.538	ENSNGAG00000000663	-	89	71.277	Nannospalax_galili
ENSHBUG00000016624	rbm17	100	94.710	ENSNBRG00000018148	rbm17	100	94.710	Neolamprologus_brichardi
ENSHBUG00000016624	rbm17	100	83.292	ENSNLEG00000033350	RBM17	100	86.290	Nomascus_leucogenys
ENSHBUG00000016624	rbm17	100	78.133	ENSMEUG00000011347	RBM17	100	78.133	Notamacropus_eugenii
ENSHBUG00000016624	rbm17	100	72.482	ENSOPRG00000002993	RBM17	100	72.482	Ochotona_princeps
ENSHBUG00000016624	rbm17	97	64.810	ENSODEG00000007286	-	99	64.557	Octodon_degus
ENSHBUG00000016624	rbm17	100	82.725	ENSODEG00000004393	RBM17	100	82.725	Octodon_degus
ENSHBUG00000016624	rbm17	100	98.768	ENSONIG00000011838	rbm17	100	98.768	Oreochromis_niloticus
ENSHBUG00000016624	rbm17	100	82.353	ENSOANG00000015455	RBM17	100	82.843	Ornithorhynchus_anatinus
ENSHBUG00000016624	rbm17	100	93.112	ENSORLG00000028798	rbm17	100	93.112	Oryzias_latipes
ENSHBUG00000016624	rbm17	100	93.112	ENSORLG00020004593	rbm17	100	91.940	Oryzias_latipes_hni
ENSHBUG00000016624	rbm17	100	94.802	ENSORLG00015000033	rbm17	100	94.802	Oryzias_latipes_hsok
ENSHBUG00000016624	rbm17	100	92.399	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSHBUG00000016624	rbm17	100	83.171	ENSOGAG00000015687	RBM17	100	83.171	Otolemur_garnettii
ENSHBUG00000016624	rbm17	100	83.538	ENSOARG00000012975	RBM17	100	83.538	Ovis_aries
ENSHBUG00000016624	rbm17	100	83.292	ENSPPAG00000032347	RBM17	98	88.430	Pan_paniscus
ENSHBUG00000016624	rbm17	100	83.538	ENSPPRG00000010706	RBM17	100	83.538	Panthera_pardus
ENSHBUG00000016624	rbm17	100	83.538	ENSPTIG00000007596	RBM17	100	83.538	Panthera_tigris_altaica
ENSHBUG00000016624	rbm17	100	83.292	ENSPTRG00000002265	RBM17	98	88.430	Pan_troglodytes
ENSHBUG00000016624	rbm17	100	83.292	ENSPANG00000023425	RBM17	97	89.167	Papio_anubis
ENSHBUG00000016624	rbm17	100	79.699	ENSPKIG00000005048	-	100	80.000	Paramormyrops_kingsleyae
ENSHBUG00000016624	rbm17	100	80.751	ENSPKIG00000025526	rbm17	100	80.328	Paramormyrops_kingsleyae
ENSHBUG00000016624	rbm17	100	82.683	ENSPSIG00000012332	RBM17	100	82.683	Pelodiscus_sinensis
ENSHBUG00000016624	rbm17	100	86.750	ENSPMGG00000007980	rbm17	100	86.750	Periophthalmus_magnuspinnatus
ENSHBUG00000016624	rbm17	100	82.927	ENSPEMG00000014320	Rbm17	100	82.927	Peromyscus_maniculatus_bairdii
ENSHBUG00000016624	rbm17	100	83.130	ENSPCIG00000019260	-	100	83.130	Phascolarctos_cinereus
ENSHBUG00000016624	rbm17	100	91.686	ENSPFOG00000013271	rbm17	100	91.686	Poecilia_formosa
ENSHBUG00000016624	rbm17	100	91.211	ENSPLAG00000004455	rbm17	100	91.211	Poecilia_latipinna
ENSHBUG00000016624	rbm17	100	92.574	ENSPMEG00000014864	rbm17	100	92.574	Poecilia_mexicana
ENSHBUG00000016624	rbm17	100	91.905	ENSPREG00000015589	rbm17	100	91.905	Poecilia_reticulata
ENSHBUG00000016624	rbm17	81	59.271	ENSPPYG00000019042	-	100	59.271	Pongo_abelii
ENSHBUG00000016624	rbm17	99	62.716	ENSPPYG00000019881	-	100	61.975	Pongo_abelii
ENSHBUG00000016624	rbm17	100	83.292	ENSPPYG00000002067	RBM17	100	83.292	Pongo_abelii
ENSHBUG00000016624	rbm17	100	75.921	ENSPCAG00000016879	RBM17	100	75.921	Procavia_capensis
ENSHBUG00000016624	rbm17	100	83.292	ENSPCOG00000027881	RBM17	100	83.292	Propithecus_coquereli
ENSHBUG00000016624	rbm17	100	74.693	ENSPVAG00000015499	RBM17	100	73.710	Pteropus_vampyrus
ENSHBUG00000016624	rbm17	100	88.665	ENSPNYG00000015274	rbm17	100	88.665	Pundamilia_nyererei
ENSHBUG00000016624	rbm17	100	84.123	ENSPNAG00000030046	rbm17	100	85.545	Pygocentrus_nattereri
ENSHBUG00000016624	rbm17	100	82.927	ENSRNOG00000018767	Rbm17	100	82.927	Rattus_norvegicus
ENSHBUG00000016624	rbm17	100	83.292	ENSRBIG00000043727	RBM17	97	89.167	Rhinopithecus_bieti
ENSHBUG00000016624	rbm17	100	83.292	ENSRROG00000044142	RBM17	97	89.167	Rhinopithecus_roxellana
ENSHBUG00000016624	rbm17	100	74.447	ENSSBOG00000023653	-	100	72.973	Saimiri_boliviensis_boliviensis
ENSHBUG00000016624	rbm17	100	83.538	ENSSBOG00000031661	-	100	83.538	Saimiri_boliviensis_boliviensis
ENSHBUG00000016624	rbm17	100	83.538	ENSSHAG00000012480	-	100	83.538	Sarcophilus_harrisii
ENSHBUG00000016624	rbm17	100	82.396	ENSSFOG00015009892	rbm17	100	83.863	Scleropages_formosus
ENSHBUG00000016624	rbm17	100	89.421	ENSSMAG00000012368	rbm17	100	89.673	Scophthalmus_maximus
ENSHBUG00000016624	rbm17	100	93.204	ENSSDUG00000015015	rbm17	100	93.204	Seriola_dumerili
ENSHBUG00000016624	rbm17	100	93.204	ENSSLDG00000014486	rbm17	100	93.204	Seriola_lalandi_dorsalis
ENSHBUG00000016624	rbm17	50	80.000	ENSSARG00000001792	-	79	90.244	Sorex_araneus
ENSHBUG00000016624	rbm17	99	83.744	ENSSPUG00000001036	RBM17	99	83.744	Sphenodon_punctatus
ENSHBUG00000016624	rbm17	100	96.535	ENSSPAG00000002338	rbm17	100	96.535	Stegastes_partitus
ENSHBUG00000016624	rbm17	100	83.292	ENSSSCG00000011134	RBM17	100	83.292	Sus_scrofa
ENSHBUG00000016624	rbm17	100	83.171	ENSTGUG00000002013	RBM17	100	83.171	Taeniopygia_guttata
ENSHBUG00000016624	rbm17	100	92.327	ENSTRUG00000010698	rbm17	100	92.327	Takifugu_rubripes
ENSHBUG00000016624	rbm17	100	91.133	ENSTNIG00000006892	rbm17	100	91.133	Tetraodon_nigroviridis
ENSHBUG00000016624	rbm17	100	63.457	ENSTBEG00000014686	RBM17	100	64.444	Tupaia_belangeri
ENSHBUG00000016624	rbm17	90	82.787	ENSTTRG00000001344	RBM17	100	82.787	Tursiops_truncatus
ENSHBUG00000016624	rbm17	100	81.203	ENSUAMG00000009499	RBM17	100	81.203	Ursus_americanus
ENSHBUG00000016624	rbm17	100	83.784	ENSUMAG00000012237	RBM17	100	83.784	Ursus_maritimus
ENSHBUG00000016624	rbm17	87	88.148	ENSVPAG00000005497	RBM17	86	88.148	Vicugna_pacos
ENSHBUG00000016624	rbm17	100	80.653	ENSVVUG00000006780	RBM17	100	80.653	Vulpes_vulpes
ENSHBUG00000016624	rbm17	99	79.950	ENSXETG00000018123	rbm17	100	79.703	Xenopus_tropicalis
ENSHBUG00000016624	rbm17	100	93.052	ENSXMAG00000008674	rbm17	100	93.052	Xiphophorus_maculatus