EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016656 (Gene tree)
Gene ID: 102295199
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 13611 bases
Position: chrJH425330.1:2768756-2782366
Accession: 102295199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014748	Suf	PF05843.14	1.1e-83	1	1
ENSHBUP00000014721	Suf	PF05843.14	2.4e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022782	-	2130	-	ENSHBUP00000014721	709 (aa)	-	-
ENSHBUT00000022818	-	5695	XM_005915145	ENSHBUP00000014748	716 (aa)	XP_005915207	UPI0003AFAC68

Gene Model

Click here to download ENSHBUG00000016656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016656	cstf3	100	91.086	ENSG00000176102	CSTF3	98	91.773	Homo_sapiens
ENSHBUG00000016656	cstf3	100	98.184	ENSAPOG00000014054	cstf3	100	98.184	Acanthochromis_polyacanthus
ENSHBUG00000016656	cstf3	99	91.667	ENSAMEG00000007187	CSTF3	98	91.631	Ailuropoda_melanoleuca
ENSHBUG00000016656	cstf3	88	94.222	ENSACIG00000005539	cstf3	100	94.222	Amphilophus_citrinellus
ENSHBUG00000016656	cstf3	100	98.184	ENSAOCG00000010930	cstf3	100	98.184	Amphiprion_ocellaris
ENSHBUG00000016656	cstf3	100	98.184	ENSAPEG00000007903	cstf3	100	98.184	Amphiprion_percula
ENSHBUG00000016656	cstf3	100	98.045	ENSATEG00000000190	cstf3	100	98.045	Anabas_testudineus
ENSHBUG00000016656	cstf3	99	91.808	ENSAPLG00000007217	CSTF3	99	91.773	Anas_platyrhynchos
ENSHBUG00000016656	cstf3	100	91.365	ENSACAG00000002823	CSTF3	98	92.057	Anolis_carolinensis
ENSHBUG00000016656	cstf3	100	91.086	ENSANAG00000020699	CSTF3	95	96.154	Aotus_nancymaae
ENSHBUG00000016656	cstf3	100	99.860	ENSACLG00000007820	cstf3	100	99.860	Astatotilapia_calliptera
ENSHBUG00000016656	cstf3	100	92.340	ENSAMXG00000014198	cstf3	98	93.333	Astyanax_mexicanus
ENSHBUG00000016656	cstf3	100	91.086	ENSBTAG00000008617	CSTF3	100	91.543	Bos_taurus
ENSHBUG00000016656	cstf3	97	47.305	WBGene00006307	suf-1	99	47.305	Caenorhabditis_elegans
ENSHBUG00000016656	cstf3	100	91.086	ENSCJAG00000005533	CSTF3	100	91.040	Callithrix_jacchus
ENSHBUG00000016656	cstf3	100	91.086	ENSCAFG00000007264	CSTF3	98	91.773	Canis_familiaris
ENSHBUG00000016656	cstf3	99	91.808	ENSCAFG00020002715	CSTF3	98	91.773	Canis_lupus_dingo
ENSHBUG00000016656	cstf3	98	91.236	ENSCHIG00000016418	CSTF3	100	91.236	Capra_hircus
ENSHBUG00000016656	cstf3	99	92.090	ENSTSYG00000000451	CSTF3	99	97.105	Carlito_syrichta
ENSHBUG00000016656	cstf3	83	90.602	ENSCAPG00000010958	CSTF3	98	90.602	Cavia_aperea
ENSHBUG00000016656	cstf3	100	91.226	ENSCPOG00000005545	CSTF3	99	91.773	Cavia_porcellus
ENSHBUG00000016656	cstf3	100	91.086	ENSCCAG00000024790	CSTF3	96	97.105	Cebus_capucinus
ENSHBUG00000016656	cstf3	100	91.086	ENSCATG00000007080	CSTF3	100	91.040	Cercocebus_atys
ENSHBUG00000016656	cstf3	100	91.086	ENSCLAG00000016179	CSTF3	98	91.773	Chinchilla_lanigera
ENSHBUG00000016656	cstf3	78	97.744	ENSCHOG00000002497	CSTF3	79	97.744	Choloepus_hoffmanni
ENSHBUG00000016656	cstf3	100	91.365	ENSCPBG00000006753	CSTF3	98	92.057	Chrysemys_picta_bellii
ENSHBUG00000016656	cstf3	99	62.275	ENSCING00000006401	-	98	62.657	Ciona_intestinalis
ENSHBUG00000016656	cstf3	98	61.453	ENSCSAVG00000004851	-	99	61.538	Ciona_savignyi
ENSHBUG00000016656	cstf3	100	91.086	ENSCANG00000035468	CSTF3	100	91.040	Colobus_angolensis_palliatus
ENSHBUG00000016656	cstf3	100	91.086	ENSCGRG00001014773	Cstf3	98	91.489	Cricetulus_griseus_chok1gshd
ENSHBUG00000016656	cstf3	100	91.086	ENSCGRG00000004142	Cstf3	98	91.489	Cricetulus_griseus_crigri
ENSHBUG00000016656	cstf3	100	96.927	ENSCSEG00000014283	cstf3	100	96.927	Cynoglossus_semilaevis
ENSHBUG00000016656	cstf3	100	96.369	ENSCVAG00000019739	cstf3	100	96.369	Cyprinodon_variegatus
ENSHBUG00000016656	cstf3	100	94.421	ENSDARG00000018904	cstf3	98	95.028	Danio_rerio
ENSHBUG00000016656	cstf3	99	91.949	ENSDNOG00000007366	CSTF3	98	91.915	Dasypus_novemcinctus
ENSHBUG00000016656	cstf3	99	83.636	ENSDORG00000005898	Cstf3	99	84.278	Dipodomys_ordii
ENSHBUG00000016656	cstf3	99	55.898	FBgn0003559	su(f)	97	56.474	Drosophila_melanogaster
ENSHBUG00000016656	cstf3	89	85.826	ENSETEG00000017097	CSTF3	90	85.826	Echinops_telfairi
ENSHBUG00000016656	cstf3	84	75.503	ENSEBUG00000015459	cstf3	96	75.503	Eptatretus_burgeri
ENSHBUG00000016656	cstf3	99	90.395	ENSEASG00005019884	CSTF3	96	97.105	Equus_asinus_asinus
ENSHBUG00000016656	cstf3	99	90.395	ENSECAG00000023338	CSTF3	96	97.105	Equus_caballus
ENSHBUG00000016656	cstf3	100	86.212	ENSEEUG00000015167	CSTF3	98	86.667	Erinaceus_europaeus
ENSHBUG00000016656	cstf3	100	94.421	ENSELUG00000023393	cstf3	98	94.744	Esox_lucius
ENSHBUG00000016656	cstf3	100	91.226	ENSFCAG00000030711	CSTF3	98	91.915	Felis_catus
ENSHBUG00000016656	cstf3	92	93.967	ENSFALG00000010764	CSTF3	100	90.783	Ficedula_albicollis
ENSHBUG00000016656	cstf3	100	91.226	ENSFDAG00000012082	CSTF3	98	91.915	Fukomys_damarensis
ENSHBUG00000016656	cstf3	100	96.508	ENSFHEG00000020623	cstf3	100	96.508	Fundulus_heteroclitus
ENSHBUG00000016656	cstf3	100	93.593	ENSGMOG00000012275	cstf3	98	94.468	Gadus_morhua
ENSHBUG00000016656	cstf3	100	90.808	ENSGALG00000011685	CSTF3	98	91.631	Gallus_gallus
ENSHBUG00000016656	cstf3	100	96.788	ENSGAFG00000002181	cstf3	100	96.788	Gambusia_affinis
ENSHBUG00000016656	cstf3	100	96.648	ENSGACG00000015997	cstf3	100	96.648	Gasterosteus_aculeatus
ENSHBUG00000016656	cstf3	100	91.365	ENSGAGG00000006200	CSTF3	100	91.365	Gopherus_agassizii
ENSHBUG00000016656	cstf3	99	86.876	ENSGGOG00000026591	CSTF3	95	93.622	Gorilla_gorilla
ENSHBUG00000016656	cstf3	100	91.086	ENSHGLG00000017834	CSTF3	98	91.773	Heterocephalus_glaber_female
ENSHBUG00000016656	cstf3	100	91.086	ENSHGLG00100018042	CSTF3	99	91.773	Heterocephalus_glaber_male
ENSHBUG00000016656	cstf3	100	93.680	ENSHCOG00000015218	cstf3	100	93.680	Hippocampus_comes
ENSHBUG00000016656	cstf3	100	93.166	ENSIPUG00000013170	CSTF3	99	94.034	Ictalurus_punctatus
ENSHBUG00000016656	cstf3	100	91.086	ENSSTOG00000013306	CSTF3	98	91.773	Ictidomys_tridecemlineatus
ENSHBUG00000016656	cstf3	99	81.513	ENSJJAG00000018430	Cstf3	99	81.513	Jaculus_jaculus
ENSHBUG00000016656	cstf3	100	95.531	ENSKMAG00000010916	cstf3	98	96.302	Kryptolebias_marmoratus
ENSHBUG00000016656	cstf3	100	96.648	ENSLBEG00000002306	cstf3	100	96.648	Labrus_bergylta
ENSHBUG00000016656	cstf3	100	90.377	ENSLACG00000017296	CSTF3	98	91.051	Latimeria_chalumnae
ENSHBUG00000016656	cstf3	100	93.872	ENSLOCG00000004415	cstf3	98	94.610	Lepisosteus_oculatus
ENSHBUG00000016656	cstf3	100	91.226	ENSLAFG00000008712	CSTF3	98	91.773	Loxodonta_africana
ENSHBUG00000016656	cstf3	100	91.086	ENSMFAG00000029516	CSTF3	100	91.040	Macaca_fascicularis
ENSHBUG00000016656	cstf3	100	91.086	ENSMMUG00000002542	CSTF3	98	91.773	Macaca_mulatta
ENSHBUG00000016656	cstf3	100	91.086	ENSMNEG00000021807	CSTF3	100	91.040	Macaca_nemestrina
ENSHBUG00000016656	cstf3	100	91.086	ENSMLEG00000039594	CSTF3	97	94.878	Mandrillus_leucophaeus
ENSHBUG00000016656	cstf3	100	97.905	ENSMAMG00000020423	cstf3	100	97.905	Mastacembelus_armatus
ENSHBUG00000016656	cstf3	100	99.860	ENSMZEG00005012082	cstf3	100	99.860	Maylandia_zebra
ENSHBUG00000016656	cstf3	100	90.669	ENSMGAG00000001383	CSTF3	99	91.243	Meleagris_gallopavo
ENSHBUG00000016656	cstf3	100	90.947	ENSMAUG00000002487	Cstf3	98	91.348	Mesocricetus_auratus
ENSHBUG00000016656	cstf3	100	91.086	ENSMICG00000004784	CSTF3	100	91.040	Microcebus_murinus
ENSHBUG00000016656	cstf3	100	91.086	ENSMOCG00000017583	Cstf3	98	91.489	Microtus_ochrogaster
ENSHBUG00000016656	cstf3	99	97.740	ENSMMOG00000016026	cstf3	95	97.740	Mola_mola
ENSHBUG00000016656	cstf3	100	91.365	ENSMODG00000009745	-	98	91.915	Monodelphis_domestica
ENSHBUG00000016656	cstf3	99	80.899	ENSMODG00000025205	-	98	81.277	Monodelphis_domestica
ENSHBUG00000016656	cstf3	100	98.045	ENSMALG00000012050	cstf3	100	98.045	Monopterus_albus
ENSHBUG00000016656	cstf3	100	91.086	MGP_CAROLIEiJ_G0024026	Cstf3	98	91.489	Mus_caroli
ENSHBUG00000016656	cstf3	100	91.086	ENSMUSG00000027176	Cstf3	98	91.489	Mus_musculus
ENSHBUG00000016656	cstf3	100	91.086	MGP_PahariEiJ_G0025464	Cstf3	98	91.489	Mus_pahari
ENSHBUG00000016656	cstf3	100	91.086	MGP_SPRETEiJ_G0024939	Cstf3	98	91.489	Mus_spretus
ENSHBUG00000016656	cstf3	100	90.947	ENSMPUG00000011457	CSTF3	98	91.631	Mustela_putorius_furo
ENSHBUG00000016656	cstf3	99	91.808	ENSMLUG00000003073	-	98	91.773	Myotis_lucifugus
ENSHBUG00000016656	cstf3	100	88.719	ENSMLUG00000026022	-	98	89.220	Myotis_lucifugus
ENSHBUG00000016656	cstf3	100	91.226	ENSNGAG00000010677	Cstf3	99	91.631	Nannospalax_galili
ENSHBUG00000016656	cstf3	88	99.839	ENSNBRG00000007345	cstf3	100	99.839	Neolamprologus_brichardi
ENSHBUG00000016656	cstf3	100	91.086	ENSNLEG00000017901	CSTF3	97	96.154	Nomascus_leucogenys
ENSHBUG00000016656	cstf3	73	90.822	ENSMEUG00000005640	-	100	90.822	Notamacropus_eugenii
ENSHBUG00000016656	cstf3	68	92.105	ENSOPRG00000000199	-	65	96.825	Ochotona_princeps
ENSHBUG00000016656	cstf3	89	79.245	ENSODEG00000006311	-	97	79.245	Octodon_degus
ENSHBUG00000016656	cstf3	100	91.365	ENSODEG00000016737	-	99	91.261	Octodon_degus
ENSHBUG00000016656	cstf3	100	99.860	ENSONIG00000005563	cstf3	100	99.860	Oreochromis_niloticus
ENSHBUG00000016656	cstf3	90	90.154	ENSOANG00000015140	CSTF3	100	90.154	Ornithorhynchus_anatinus
ENSHBUG00000016656	cstf3	100	91.086	ENSOCUG00000015417	CSTF3	98	91.631	Oryctolagus_cuniculus
ENSHBUG00000016656	cstf3	100	95.950	ENSORLG00000009762	cstf3	100	95.950	Oryzias_latipes
ENSHBUG00000016656	cstf3	100	95.950	ENSORLG00020005540	cstf3	100	95.950	Oryzias_latipes_hni
ENSHBUG00000016656	cstf3	100	95.810	ENSORLG00015003551	cstf3	100	95.810	Oryzias_latipes_hsok
ENSHBUG00000016656	cstf3	100	96.229	ENSOMEG00000003848	cstf3	100	96.229	Oryzias_melastigma
ENSHBUG00000016656	cstf3	100	90.707	ENSOGAG00000010229	CSTF3	98	91.243	Otolemur_garnettii
ENSHBUG00000016656	cstf3	90	91.135	ENSOARG00000017271	CSTF3	99	91.135	Ovis_aries
ENSHBUG00000016656	cstf3	99	89.301	ENSPPAG00000027358	CSTF3	98	89.255	Pan_paniscus
ENSHBUG00000016656	cstf3	100	91.226	ENSPPRG00000016852	CSTF3	98	91.915	Panthera_pardus
ENSHBUG00000016656	cstf3	100	91.226	ENSPTIG00000008716	CSTF3	98	91.915	Panthera_tigris_altaica
ENSHBUG00000016656	cstf3	100	91.086	ENSPTRG00000003485	CSTF3	98	91.773	Pan_troglodytes
ENSHBUG00000016656	cstf3	100	91.086	ENSPANG00000013722	CSTF3	97	94.878	Papio_anubis
ENSHBUG00000016656	cstf3	100	93.724	ENSPKIG00000023648	cstf3	98	94.318	Paramormyrops_kingsleyae
ENSHBUG00000016656	cstf3	100	91.365	ENSPSIG00000009173	CSTF3	98	92.057	Pelodiscus_sinensis
ENSHBUG00000016656	cstf3	77	97.628	ENSPMGG00000000164	cstf3	99	97.628	Periophthalmus_magnuspinnatus
ENSHBUG00000016656	cstf3	100	91.086	ENSPEMG00000011481	Cstf3	98	91.489	Peromyscus_maniculatus_bairdii
ENSHBUG00000016656	cstf3	99	79.296	ENSPMAG00000007282	cstf3	98	79.520	Petromyzon_marinus
ENSHBUG00000016656	cstf3	100	89.013	ENSPCIG00000026406	-	100	91.520	Phascolarctos_cinereus
ENSHBUG00000016656	cstf3	100	76.356	ENSPCIG00000030419	-	88	77.337	Phascolarctos_cinereus
ENSHBUG00000016656	cstf3	100	97.067	ENSPFOG00000017239	cstf3	100	97.067	Poecilia_formosa
ENSHBUG00000016656	cstf3	100	97.207	ENSPLAG00000009456	cstf3	100	97.207	Poecilia_latipinna
ENSHBUG00000016656	cstf3	100	97.067	ENSPMEG00000010320	cstf3	100	97.067	Poecilia_mexicana
ENSHBUG00000016656	cstf3	100	97.067	ENSPREG00000013549	cstf3	100	97.067	Poecilia_reticulata
ENSHBUG00000016656	cstf3	100	91.086	ENSPPYG00000003375	CSTF3	98	91.773	Pongo_abelii
ENSHBUG00000016656	cstf3	71	96.167	ENSPCAG00000008025	-	69	96.167	Procavia_capensis
ENSHBUG00000016656	cstf3	100	86.920	ENSPCOG00000014417	CSTF3	98	87.536	Propithecus_coquereli
ENSHBUG00000016656	cstf3	100	86.072	ENSPVAG00000002350	CSTF3	98	86.667	Pteropus_vampyrus
ENSHBUG00000016656	cstf3	100	100.000	ENSPNYG00000018259	cstf3	100	100.000	Pundamilia_nyererei
ENSHBUG00000016656	cstf3	100	94.700	ENSPNAG00000020182	cstf3	98	95.455	Pygocentrus_nattereri
ENSHBUG00000016656	cstf3	88	90.400	ENSRNOG00000012089	Cstf3	100	90.400	Rattus_norvegicus
ENSHBUG00000016656	cstf3	99	90.395	ENSRBIG00000044258	CSTF3	100	91.040	Rhinopithecus_bieti
ENSHBUG00000016656	cstf3	100	91.086	ENSRROG00000043450	CSTF3	100	91.040	Rhinopithecus_roxellana
ENSHBUG00000016656	cstf3	100	91.086	ENSSBOG00000024764	CSTF3	98	97.105	Saimiri_boliviensis_boliviensis
ENSHBUG00000016656	cstf3	100	81.198	ENSSHAG00000003135	-	98	82.128	Sarcophilus_harrisii
ENSHBUG00000016656	cstf3	99	91.949	ENSSHAG00000018128	-	98	91.915	Sarcophilus_harrisii
ENSHBUG00000016656	cstf3	100	94.003	ENSSFOG00015022133	cstf3	98	94.602	Scleropages_formosus
ENSHBUG00000016656	cstf3	100	97.207	ENSSMAG00000002197	cstf3	100	97.207	Scophthalmus_maximus
ENSHBUG00000016656	cstf3	100	98.324	ENSSDUG00000020426	cstf3	100	98.324	Seriola_dumerili
ENSHBUG00000016656	cstf3	100	98.045	ENSSLDG00000025649	cstf3	100	98.045	Seriola_lalandi_dorsalis
ENSHBUG00000016656	cstf3	100	90.947	ENSSARG00000000391	CSTF3	98	91.631	Sorex_araneus
ENSHBUG00000016656	cstf3	96	91.462	ENSSPUG00000010546	CSTF3	100	91.462	Sphenodon_punctatus
ENSHBUG00000016656	cstf3	100	98.045	ENSSPAG00000004958	cstf3	100	98.045	Stegastes_partitus
ENSHBUG00000016656	cstf3	99	90.795	ENSSSCG00000040954	CSTF3	98	91.631	Sus_scrofa
ENSHBUG00000016656	cstf3	99	91.808	ENSTGUG00000005010	CSTF3	99	91.915	Taeniopygia_guttata
ENSHBUG00000016656	cstf3	100	95.251	ENSTRUG00000004959	cstf3	98	95.733	Takifugu_rubripes
ENSHBUG00000016656	cstf3	99	96.469	ENSTNIG00000013811	cstf3	99	96.469	Tetraodon_nigroviridis
ENSHBUG00000016656	cstf3	89	88.474	ENSTBEG00000001544	CSTF3	90	88.474	Tupaia_belangeri
ENSHBUG00000016656	cstf3	100	88.301	ENSTTRG00000016366	CSTF3	98	88.936	Tursiops_truncatus
ENSHBUG00000016656	cstf3	99	91.525	ENSUMAG00000018971	CSTF3	100	90.720	Ursus_maritimus
ENSHBUG00000016656	cstf3	100	90.947	ENSVPAG00000007800	CSTF3	98	91.631	Vicugna_pacos
ENSHBUG00000016656	cstf3	99	91.808	ENSVVUG00000014938	CSTF3	100	91.040	Vulpes_vulpes
ENSHBUG00000016656	cstf3	66	42.324	ENSXETG00000017946	-	99	41.962	Xenopus_tropicalis
ENSHBUG00000016656	cstf3	88	75.781	ENSXETG00000021399	cstf3	100	76.861	Xenopus_tropicalis
ENSHBUG00000016656	cstf3	88	96.629	ENSXCOG00000011741	cstf3	100	96.629	Xiphophorus_couchianus
ENSHBUG00000016656	cstf3	100	96.927	ENSXMAG00000009545	cstf3	100	96.927	Xiphophorus_maculatus