EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000016743 (Gene tree)
Gene ID: 102298441
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 54618 bases
Position: chrJH425450.1:445497-500114
Accession: 102298441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014854	zf-met	PF12874.7	0.00014	1	1
ENSHBUP00000014878	zf-met	PF12874.7	0.00014	1	1
ENSHBUP00000031223	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000022966	RBM20-202	5299	XM_005931295	ENSHBUP00000031223	1143 (aa)	XP_005931357	UPI0003BD2288
ENSHBUT00000022987	RBM20-203	4810	XM_005931296	ENSHBUP00000014878	1131 (aa)	XP_005931358	UPI0003BC9097
ENSHBUT00000022950	RBM20-201	4997	XM_005931297	ENSHBUP00000014854	1107 (aa)	XP_005931359	UPI0003BD1080

Gene Model

Click here to download ENSHBUG00000016743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016743	RBM20	88	78.730	ENSAPOG00000011327	RBM20	99	79.456	Acanthochromis_polyacanthus
ENSHBUG00000016743	RBM20	82	92.982	ENSACIG00000016368	RBM20	96	92.982	Amphilophus_citrinellus
ENSHBUG00000016743	RBM20	100	77.758	ENSAOCG00000018378	RBM20	100	77.324	Amphiprion_ocellaris
ENSHBUG00000016743	RBM20	80	87.719	ENSATEG00000008782	RBM20	96	87.719	Anabas_testudineus
ENSHBUG00000016743	RBM20	100	98.863	ENSACLG00000025652	RBM20	100	98.863	Astatotilapia_calliptera
ENSHBUG00000016743	RBM20	100	52.108	ENSELUG00000022906	RBM20	100	52.988	Esox_lucius
ENSHBUG00000016743	RBM20	99	67.938	ENSKMAG00000020318	RBM20	99	67.857	Kryptolebias_marmoratus
ENSHBUG00000016743	RBM20	76	40.107	ENSLACG00000012822	RBM20	74	40.151	Latimeria_chalumnae
ENSHBUG00000016743	RBM20	99	71.183	ENSMAMG00000014492	RBM20	100	71.074	Mastacembelus_armatus
ENSHBUG00000016743	RBM20	100	98.775	ENSMZEG00005003037	RBM20	100	98.775	Maylandia_zebra
ENSHBUG00000016743	RBM20	91	63.820	ENSMMOG00000021599	RBM20	96	63.146	Mola_mola
ENSHBUG00000016743	RBM20	82	77.143	ENSMODG00000010399	RBM20	74	77.143	Monodelphis_domestica
ENSHBUG00000016743	RBM20	100	97.031	ENSNBRG00000003302	RBM20	100	97.031	Neolamprologus_brichardi
ENSHBUG00000016743	RBM20	95	88.619	ENSONIG00000016294	RBM20	100	88.619	Oreochromis_niloticus
ENSHBUG00000016743	RBM20	99	46.706	ENSPKIG00000017337	RBM20	100	46.750	Paramormyrops_kingsleyae
ENSHBUG00000016743	RBM20	100	98.826	ENSPNYG00000002118	RBM20	100	98.826	Pundamilia_nyererei
ENSHBUG00000016743	RBM20	100	73.304	ENSSMAG00000001397	RBM20	100	72.957	Scophthalmus_maximus
ENSHBUG00000016743	RBM20	99	76.784	ENSSDUG00000010084	RBM20	97	76.423	Seriola_dumerili
ENSHBUG00000016743	RBM20	100	76.983	ENSSLDG00000012344	RBM20	100	76.635	Seriola_lalandi_dorsalis
ENSHBUG00000016743	RBM20	100	77.613	ENSSPAG00000005114	RBM20	100	77.613	Stegastes_partitus