EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000016788 (Gene tree)
Gene ID
102300118
Gene Symbol
srsf1a
Alias
sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name
serine/arginine-rich splicing factor 1
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Plus strand
Length
4098 bases
Position
chrJH425460.1:1157240-1161337
Accession
102300118
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000031235RRM_1PF00076.222.8e-3212
ENSHBUP00000031235RRM_1PF00076.222.8e-3222
ENSHBUP00000014884RRM_1PF00076.223.1e-3212
ENSHBUP00000014884RRM_1PF00076.223.1e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000022994-1621XM_005932047ENSHBUP00000014884244 (aa)XP_005932109UPI00022B16C8
ENSHBUT00000033567-714-ENSHBUP00000031235237 (aa)--
Gene Model
Click here to download ENSHBUG00000016788's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016788's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000016788srsf1a8836.437ENSHBUG00000011326-6338.261
ENSHBUG00000016788srsf1a9138.655ENSHBUG00000006386-5243.787
ENSHBUG00000016788srsf1a6842.623ENSHBUG00000014048srsf5a6041.530
ENSHBUG00000016788srsf1a7770.330ENSHBUG00000019320srsf97272.727
ENSHBUG00000016788srsf1a6643.333ENSHBUG00000012462srsf5b9144.275
ENSHBUG00000016788srsf1a5168.333ENSHBUG00000015600-9167.500
ENSHBUG00000016788srsf1a8382.039ENSHBUG00000015576-8083.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000016788srsf1a9884.774ENSG00000136450SRSF19493.443Homo_sapiens
ENSHBUG00000016788srsf1a10099.184ENSAPOG00000002748-10099.184Acanthochromis_polyacanthus
ENSHBUG00000016788srsf1a8088.947ENSAPOG00000008542-8087.940Acanthochromis_polyacanthus
ENSHBUG00000016788srsf1a8088.421ENSAMEG00000002635SRSF17790.000Ailuropoda_melanoleuca
ENSHBUG00000016788srsf1a97100.000ENSACIG00000008091srsf1a100100.000Amphilophus_citrinellus
ENSHBUG00000016788srsf1a10099.592ENSAOCG00000010671-10099.592Amphiprion_ocellaris
ENSHBUG00000016788srsf1a8087.940ENSAOCG00000000337-8087.940Amphiprion_ocellaris
ENSHBUG00000016788srsf1a10099.592ENSAPEG00000009915-10099.592Amphiprion_percula
ENSHBUG00000016788srsf1a8087.940ENSAPEG00000023352-7987.940Amphiprion_percula
ENSHBUG00000016788srsf1a10098.785ENSATEG00000022403-10098.785Anabas_testudineus
ENSHBUG00000016788srsf1a8387.817ENSATEG00000021567-9284.163Anabas_testudineus
ENSHBUG00000016788srsf1a8088.601ENSACAG00000005542-7890.674Anolis_carolinensis
ENSHBUG00000016788srsf1a8166.839ENSANAG00000025417-7367.895Aotus_nancymaae
ENSHBUG00000016788srsf1a9884.774ENSANAG00000020583-9391.176Aotus_nancymaae
ENSHBUG00000016788srsf1a9580.335ENSAMXG00000035996srsf1a7988.384Astyanax_mexicanus
ENSHBUG00000016788srsf1a5572.903ENSAMXG00000024373-7276.774Astyanax_mexicanus
ENSHBUG00000016788srsf1a9884.774ENSBTAG00000014766SRSF18886.099Bos_taurus
ENSHBUG00000016788srsf1a8082.383ENSCJAG00000008111-8683.420Callithrix_jacchus
ENSHBUG00000016788srsf1a9884.774ENSCJAG00000041713-9391.176Callithrix_jacchus
ENSHBUG00000016788srsf1a9884.774ENSCAFG00000017430SRSF18886.099Canis_familiaris
ENSHBUG00000016788srsf1a9884.774ENSCAFG00020025632-8886.099Canis_lupus_dingo
ENSHBUG00000016788srsf1a8089.637ENSCHIG00000010787SRSF17891.710Capra_hircus
ENSHBUG00000016788srsf1a9884.774ENSTSYG00000013899-9391.176Carlito_syrichta
ENSHBUG00000016788srsf1a9884.774ENSCPOG00000032681-8886.099Cavia_porcellus
ENSHBUG00000016788srsf1a9884.774ENSCCAG00000029484-9391.176Cebus_capucinus
ENSHBUG00000016788srsf1a9884.774ENSCATG00000042294-9391.176Cercocebus_atys
ENSHBUG00000016788srsf1a9884.774ENSCLAG00000014707-8886.099Chinchilla_lanigera
ENSHBUG00000016788srsf1a9883.951ENSCSAG00000005642-8885.202Chlorocebus_sabaeus
ENSHBUG00000016788srsf1a8089.637ENSCHOG00000001899SRSF17891.710Choloepus_hoffmanni
ENSHBUG00000016788srsf1a9884.362ENSCPBG00000009851-8885.650Chrysemys_picta_bellii
ENSHBUG00000016788srsf1a9884.774ENSCANG00000029726-9391.176Colobus_angolensis_palliatus
ENSHBUG00000016788srsf1a9884.774ENSCGRG00001000670Srsf18886.099Cricetulus_griseus_chok1gshd
ENSHBUG00000016788srsf1a9884.774ENSCGRG00000005590Srsf18886.099Cricetulus_griseus_crigri
ENSHBUG00000016788srsf1a8081.731ENSCSEG00000009973-7981.731Cynoglossus_semilaevis
ENSHBUG00000016788srsf1a10091.393ENSCSEG00000014272-9991.393Cynoglossus_semilaevis
ENSHBUG00000016788srsf1a8086.598ENSCVAG00000005458-9086.264Cyprinodon_variegatus
ENSHBUG00000016788srsf1a10099.184ENSCVAG00000018617-10099.184Cyprinodon_variegatus
ENSHBUG00000016788srsf1a8089.119ENSDARG00000017843srsf1b7991.710Danio_rerio
ENSHBUG00000016788srsf1a8084.236ENSDARG00000057691srsf1a9985.340Danio_rerio
ENSHBUG00000016788srsf1a9884.774ENSDNOG00000011737-8886.099Dasypus_novemcinctus
ENSHBUG00000016788srsf1a9884.774ENSDORG00000015082Srsf18886.099Dipodomys_ordii
ENSHBUG00000016788srsf1a7886.243ENSETEG00000005349-6290.556Echinops_telfairi
ENSHBUG00000016788srsf1a9884.774ENSEASG00005002922-8886.099Equus_asinus_asinus
ENSHBUG00000016788srsf1a8089.637ENSECAG00000016654SRSF17891.710Equus_caballus
ENSHBUG00000016788srsf1a7590.000ENSEEUG00000009255-6291.667Erinaceus_europaeus
ENSHBUG00000016788srsf1a9993.574ENSELUG00000021646srsf1a9993.574Esox_lucius
ENSHBUG00000016788srsf1a9884.774ENSFCAG00000002250-9090.556Felis_catus
ENSHBUG00000016788srsf1a7894.340ENSFALG00000005062-9565.714Ficedula_albicollis
ENSHBUG00000016788srsf1a9884.774ENSFDAG00000010646-8886.099Fukomys_damarensis
ENSHBUG00000016788srsf1a10098.776ENSFHEG00000003174srsf1a10098.776Fundulus_heteroclitus
ENSHBUG00000016788srsf1a8289.744ENSGMOG00000014787-8088.947Gadus_morhua
ENSHBUG00000016788srsf1a8089.119ENSGALG00000005525SRSF17891.192Gallus_gallus
ENSHBUG00000016788srsf1a8086.842ENSGACG00000020621srsf1b7886.316Gasterosteus_aculeatus
ENSHBUG00000016788srsf1a9884.362ENSGAGG00000022965-8885.650Gopherus_agassizii
ENSHBUG00000016788srsf1a9884.774ENSGGOG00000004386SRSF19391.176Gorilla_gorilla
ENSHBUG00000016788srsf1a6889.024ENSHGLG00000000600-7691.463Heterocephalus_glaber_female
ENSHBUG00000016788srsf1a6889.024ENSHGLG00000000669-7691.463Heterocephalus_glaber_female
ENSHBUG00000016788srsf1a9884.774ENSHGLG00100016906-8886.099Heterocephalus_glaber_male
ENSHBUG00000016788srsf1a8189.950ENSHCOG00000018918srsf1a8886.161Hippocampus_comes
ENSHBUG00000016788srsf1a8186.070ENSIPUG00000017039srsf1a8088.060Ictalurus_punctatus
ENSHBUG00000016788srsf1a8090.625ENSIPUG00000008750srsf1b8090.256Ictalurus_punctatus
ENSHBUG00000016788srsf1a9884.774ENSSTOG00000000243-9190.055Ictidomys_tridecemlineatus
ENSHBUG00000016788srsf1a9884.774ENSJJAG00000000102-8886.099Jaculus_jaculus
ENSHBUG00000016788srsf1a5182.787ENSJJAG00000014464-9284.553Jaculus_jaculus
ENSHBUG00000016788srsf1a10097.967ENSKMAG00000019232srsf1a10097.967Kryptolebias_marmoratus
ENSHBUG00000016788srsf1a8079.592ENSLBEG00000015294-7981.122Labrus_bergylta
ENSHBUG00000016788srsf1a10098.776ENSLBEG00000020864-10098.776Labrus_bergylta
ENSHBUG00000016788srsf1a8484.804ENSLACG00000014160srsf1a7288.542Latimeria_chalumnae
ENSHBUG00000016788srsf1a8089.583ENSLOCG00000005994srsf1a7891.667Lepisosteus_oculatus
ENSHBUG00000016788srsf1a8089.637ENSLAFG00000025743SRSF17891.710Loxodonta_africana
ENSHBUG00000016788srsf1a9884.774ENSMFAG00000040003-9391.176Macaca_fascicularis
ENSHBUG00000016788srsf1a9884.774ENSMMUG00000004725SRSF19391.176Macaca_mulatta
ENSHBUG00000016788srsf1a9981.557ENSMMUG00000003260-9389.062Macaca_mulatta
ENSHBUG00000016788srsf1a9884.774ENSMNEG00000027680-9391.176Macaca_nemestrina
ENSHBUG00000016788srsf1a9981.967ENSMNEG00000015983-8883.857Macaca_nemestrina
ENSHBUG00000016788srsf1a8089.637ENSMLEG00000040509SRSF17891.710Mandrillus_leucophaeus
ENSHBUG00000016788srsf1a9982.988ENSMLEG00000015243-8882.273Mandrillus_leucophaeus
ENSHBUG00000016788srsf1a10099.592ENSMAMG00000018454-10099.592Mastacembelus_armatus
ENSHBUG00000016788srsf1a8090.526ENSMAMG00000019687-9186.036Mastacembelus_armatus
ENSHBUG00000016788srsf1a8092.188ENSMAMG00000019691-8091.667Mastacembelus_armatus
ENSHBUG00000016788srsf1a9884.774ENSMAUG00000021845Srsf18886.099Mesocricetus_auratus
ENSHBUG00000016788srsf1a9884.774ENSMICG00000013639-9391.176Microcebus_murinus
ENSHBUG00000016788srsf1a9884.774ENSMOCG00000001996Srsf18886.099Microtus_ochrogaster
ENSHBUG00000016788srsf1a9798.701ENSMMOG00000014354srsf1a10098.701Mola_mola
ENSHBUG00000016788srsf1a7888.421ENSMODG00000014781-6292.265Monodelphis_domestica
ENSHBUG00000016788srsf1a9471.930ENSMALG00000007763-7782.632Monopterus_albus
ENSHBUG00000016788srsf1a8197.927ENSMALG00000017129-7698.446Monopterus_albus
ENSHBUG00000016788srsf1a9884.774MGP_CAROLIEiJ_G0016943Srsf19090.556Mus_caroli
ENSHBUG00000016788srsf1a9884.774ENSMUSG00000018379Srsf19090.556Mus_musculus
ENSHBUG00000016788srsf1a9884.774MGP_PahariEiJ_G0018074Srsf18886.099Mus_pahari
ENSHBUG00000016788srsf1a9884.774MGP_SPRETEiJ_G0017790Srsf19090.556Mus_spretus
ENSHBUG00000016788srsf1a8089.637ENSMPUG00000015369SRSF17891.710Mustela_putorius_furo
ENSHBUG00000016788srsf1a8089.637ENSMLUG00000011040SRSF17891.710Myotis_lucifugus
ENSHBUG00000016788srsf1a8385.714ENSMLUG00000023995-7787.895Myotis_lucifugus
ENSHBUG00000016788srsf1a8089.637ENSNGAG00000011395Srsf17891.710Nannospalax_galili
ENSHBUG00000016788srsf1a9974.590ENSNBRG00000008041srsf1b7880.208Neolamprologus_brichardi
ENSHBUG00000016788srsf1a9884.774ENSNLEG00000008088-9391.176Nomascus_leucogenys
ENSHBUG00000016788srsf1a5087.805ENSMEUG00000002783-9888.710Notamacropus_eugenii
ENSHBUG00000016788srsf1a5487.879ENSOPRG00000001234-7290.909Ochotona_princeps
ENSHBUG00000016788srsf1a9884.774ENSODEG00000011481-8886.099Octodon_degus
ENSHBUG00000016788srsf1a8191.282ENSONIG00000004860-7990.625Oreochromis_niloticus
ENSHBUG00000016788srsf1a100100.000ENSONIG00000013160-99100.000Oreochromis_niloticus
ENSHBUG00000016788srsf1a9964.082ENSOCUG00000010894-7572.872Oryctolagus_cuniculus
ENSHBUG00000016788srsf1a10099.592ENSORLG00000004580srsf1a10099.592Oryzias_latipes
ENSHBUG00000016788srsf1a10099.592ENSORLG00020009456srsf1a10099.592Oryzias_latipes_hni
ENSHBUG00000016788srsf1a10099.184ENSORLG00015014384srsf1a10099.567Oryzias_latipes_hsok
ENSHBUG00000016788srsf1a9297.788ENSOMEG00000004106srsf1a9397.788Oryzias_melastigma
ENSHBUG00000016788srsf1a8590.196ENSOGAG00000025950-7891.710Otolemur_garnettii
ENSHBUG00000016788srsf1a8089.474ENSOARG00000008323SRSF17789.474Ovis_aries
ENSHBUG00000016788srsf1a9884.774ENSPPAG00000043403-9391.176Pan_paniscus
ENSHBUG00000016788srsf1a9884.774ENSPPRG00000004238-9090.556Panthera_pardus
ENSHBUG00000016788srsf1a9884.774ENSPTRG00000049077SRSF19391.176Pan_troglodytes
ENSHBUG00000016788srsf1a9968.033ENSPANG00000030275-8965.179Papio_anubis
ENSHBUG00000016788srsf1a9884.774ENSPANG00000022305-9391.176Papio_anubis
ENSHBUG00000016788srsf1a8188.832ENSPKIG00000012857srsf1b7891.667Paramormyrops_kingsleyae
ENSHBUG00000016788srsf1a8188.542ENSPKIG00000007204srsf1a8391.146Paramormyrops_kingsleyae
ENSHBUG00000016788srsf1a8081.865ENSPSIG00000009000-7290.226Pelodiscus_sinensis
ENSHBUG00000016788srsf1a9683.404ENSPMGG00000005467-9778.151Periophthalmus_magnuspinnatus
ENSHBUG00000016788srsf1a10096.032ENSPMGG00000013112-10096.087Periophthalmus_magnuspinnatus
ENSHBUG00000016788srsf1a9884.774ENSPEMG00000021416Srsf18886.099Peromyscus_maniculatus_bairdii
ENSHBUG00000016788srsf1a8090.206ENSPCIG00000006076-7891.753Phascolarctos_cinereus
ENSHBUG00000016788srsf1a8485.714ENSPFOG00000018325-7185.930Poecilia_formosa
ENSHBUG00000016788srsf1a8186.802ENSPLAG00000008416srsf1b7887.047Poecilia_latipinna
ENSHBUG00000016788srsf1a5198.374ENSPMEG00000020607-9998.374Poecilia_mexicana
ENSHBUG00000016788srsf1a5198.374ENSPMEG00000014312-9998.374Poecilia_mexicana
ENSHBUG00000016788srsf1a8186.802ENSPMEG00000002388-7887.047Poecilia_mexicana
ENSHBUG00000016788srsf1a10099.184ENSPREG00000009667srsf1a10099.184Poecilia_reticulata
ENSHBUG00000016788srsf1a9884.774ENSPPYG00000008240SRSF18886.099Pongo_abelii
ENSHBUG00000016788srsf1a8089.637ENSPCAG00000005199SRSF17891.710Procavia_capensis
ENSHBUG00000016788srsf1a8173.232ENSPCOG00000025736-9374.074Propithecus_coquereli
ENSHBUG00000016788srsf1a9884.774ENSPCOG00000023654-9391.176Propithecus_coquereli
ENSHBUG00000016788srsf1a5597.143ENSPVAG00000000519-5497.143Pteropus_vampyrus
ENSHBUG00000016788srsf1a8092.105ENSPNAG00000014601srsf1b7891.579Pygocentrus_nattereri
ENSHBUG00000016788srsf1a9583.983ENSPNAG00000022241srsf1a7891.053Pygocentrus_nattereri
ENSHBUG00000016788srsf1a8089.637ENSRNOG00000050323Srsf17891.710Rattus_norvegicus
ENSHBUG00000016788srsf1a9884.774ENSRBIG00000034445-9391.176Rhinopithecus_bieti
ENSHBUG00000016788srsf1a9884.774ENSRROG00000041506-9391.176Rhinopithecus_roxellana
ENSHBUG00000016788srsf1a9884.774ENSSBOG00000025377-9391.176Saimiri_boliviensis_boliviensis
ENSHBUG00000016788srsf1a8090.206ENSSHAG00000002552-7891.753Sarcophilus_harrisii
ENSHBUG00000016788srsf1a8289.286ENSSFOG00015004800srsf1a7792.147Scleropages_formosus
ENSHBUG00000016788srsf1a8085.000ENSSMAG00000009719-7885.000Scophthalmus_maximus
ENSHBUG00000016788srsf1a10097.551ENSSMAG00000007018-10097.551Scophthalmus_maximus
ENSHBUG00000016788srsf1a9775.745ENSSDUG00000003929-8379.293Seriola_dumerili
ENSHBUG00000016788srsf1a10098.776ENSSDUG00000011303-10098.776Seriola_dumerili
ENSHBUG00000016788srsf1a10098.776ENSSLDG00000010543-10098.776Seriola_lalandi_dorsalis
ENSHBUG00000016788srsf1a8081.579ENSSLDG00000016868-8976.471Seriola_lalandi_dorsalis
ENSHBUG00000016788srsf1a9570.742ENSSLDG00000016895-7882.703Seriola_lalandi_dorsalis
ENSHBUG00000016788srsf1a7590.000ENSSARG00000010949-6291.667Sorex_araneus
ENSHBUG00000016788srsf1a9884.362ENSSPUG00000000804-9190.000Sphenodon_punctatus
ENSHBUG00000016788srsf1a10099.187ENSSPAG00000022562-10099.187Stegastes_partitus
ENSHBUG00000016788srsf1a8184.466ENSSPAG00000014152-8084.466Stegastes_partitus
ENSHBUG00000016788srsf1a9884.774ENSSSCG00000017626-8886.099Sus_scrofa
ENSHBUG00000016788srsf1a5587.218ENSTGUG00000008416-7290.226Taeniopygia_guttata
ENSHBUG00000016788srsf1a10098.776ENSTRUG00000003691srsf1a10098.776Takifugu_rubripes
ENSHBUG00000016788srsf1a10098.776ENSTNIG00000016223srsf1a9998.776Tetraodon_nigroviridis
ENSHBUG00000016788srsf1a7587.778ENSTBEG00000015378-6290.556Tupaia_belangeri
ENSHBUG00000016788srsf1a5487.879ENSTTRG00000007310SRSF17290.909Tursiops_truncatus
ENSHBUG00000016788srsf1a8089.637ENSUAMG00000009858SRSF17891.710Ursus_americanus
ENSHBUG00000016788srsf1a9884.774ENSUMAG00000000455-8886.099Ursus_maritimus
ENSHBUG00000016788srsf1a8089.119ENSVPAG00000010094SRSF17891.192Vicugna_pacos
ENSHBUG00000016788srsf1a9884.774ENSVVUG00000011882-8886.099Vulpes_vulpes
ENSHBUG00000016788srsf1a8489.950ENSXETG00000008954srsf17983.962Xenopus_tropicalis
ENSHBUG00000016788srsf1a10099.184ENSXMAG00000011766srsf1a10099.184Xiphophorus_maculatus

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