EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016818 (Gene tree)
Gene ID: 102293822
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 19527 bases
Position: chrJH425620.1:604405-623931
Accession: 102293822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000014936	RRM_1	PF00076.22	2.1e-30	1	2
ENSHBUP00000014936	RRM_1	PF00076.22	2.1e-30	2	2
ENSHBUP00000014932	RRM_1	PF00076.22	2.3e-30	1	2
ENSHBUP00000014932	RRM_1	PF00076.22	2.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023051	-	2876	XM_005940957	ENSHBUP00000014932	673 (aa)	XP_005941019	UPI0003BD8990
ENSHBUT00000023059	-	3188	-	ENSHBUP00000014936	645 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000016818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016818	sfpq	61	58.333	ENSHBUG00000010741	nono	89	60.150
ENSHBUG00000016818	sfpq	71	50.964	ENSHBUG00000001139	pspc1	78	58.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016818	sfpq	63	73.529	ENSG00000116560	SFPQ	89	72.362	Homo_sapiens
ENSHBUG00000016818	sfpq	69	86.695	ENSAPOG00000024257	sfpq	100	80.087	Acanthochromis_polyacanthus
ENSHBUG00000016818	sfpq	63	73.469	ENSAMEG00000000815	SFPQ	100	73.243	Ailuropoda_melanoleuca
ENSHBUG00000016818	sfpq	100	83.013	ENSACIG00000000905	sfpq	100	83.333	Amphilophus_citrinellus
ENSHBUG00000016818	sfpq	70	85.443	ENSAOCG00000002889	sfpq	100	78.642	Amphiprion_ocellaris
ENSHBUG00000016818	sfpq	70	85.443	ENSAPEG00000016556	sfpq	100	78.642	Amphiprion_percula
ENSHBUG00000016818	sfpq	100	74.963	ENSATEG00000002981	sfpq	100	76.676	Anabas_testudineus
ENSHBUG00000016818	sfpq	50	50.986	ENSANAG00000021268	-	100	50.847	Aotus_nancymaae
ENSHBUG00000016818	sfpq	63	60.227	ENSANAG00000027438	-	60	64.461	Aotus_nancymaae
ENSHBUG00000016818	sfpq	100	99.703	ENSACLG00000022332	sfpq	100	99.703	Astatotilapia_calliptera
ENSHBUG00000016818	sfpq	63	81.030	ENSAMXG00000011538	sfpq	99	62.229	Astyanax_mexicanus
ENSHBUG00000016818	sfpq	63	73.529	ENSBTAG00000016328	SFPQ	63	72.973	Bos_taurus
ENSHBUG00000016818	sfpq	63	73.529	ENSCJAG00000001431	SFPQ	63	72.973	Callithrix_jacchus
ENSHBUG00000016818	sfpq	63	69.841	ENSCAFG00000018271	-	67	68.778	Canis_familiaris
ENSHBUG00000016818	sfpq	63	69.091	ENSCAFG00000017608	-	65	68.397	Canis_familiaris
ENSHBUG00000016818	sfpq	63	73.198	ENSCAFG00000003595	-	67	72.973	Canis_familiaris
ENSHBUG00000016818	sfpq	50	66.000	ENSCAFG00020010702	-	100	66.185	Canis_lupus_dingo
ENSHBUG00000016818	sfpq	63	69.841	ENSCAFG00020004881	-	66	68.778	Canis_lupus_dingo
ENSHBUG00000016818	sfpq	63	73.529	ENSCHIG00000023097	SFPQ	62	72.973	Capra_hircus
ENSHBUG00000016818	sfpq	50	71.591	ENSTSYG00000037120	-	100	71.307	Carlito_syrichta
ENSHBUG00000016818	sfpq	50	63.533	ENSCPOG00000015018	-	100	63.085	Cavia_porcellus
ENSHBUG00000016818	sfpq	63	73.529	ENSCCAG00000029361	-	63	72.973	Cebus_capucinus
ENSHBUG00000016818	sfpq	56	77.049	ENSCATG00000036179	-	55	75.066	Cercocebus_atys
ENSHBUG00000016818	sfpq	63	50.334	ENSCATG00000032664	-	61	48.552	Cercocebus_atys
ENSHBUG00000016818	sfpq	50	71.591	ENSCLAG00000009583	-	100	71.307	Chinchilla_lanigera
ENSHBUG00000016818	sfpq	63	73.529	ENSCSAG00000001082	SFPQ	63	72.973	Chlorocebus_sabaeus
ENSHBUG00000016818	sfpq	54	72.178	ENSCHOG00000009131	SFPQ	100	71.916	Choloepus_hoffmanni
ENSHBUG00000016818	sfpq	64	70.395	ENSCPBG00000018674	SFPQ	70	70.614	Chrysemys_picta_bellii
ENSHBUG00000016818	sfpq	50	71.591	ENSCANG00000028087	-	100	71.307	Colobus_angolensis_palliatus
ENSHBUG00000016818	sfpq	63	72.748	ENSCGRG00001011698	Sfpq	63	72.523	Cricetulus_griseus_chok1gshd
ENSHBUG00000016818	sfpq	55	79.661	ENSCGRG00000010128	Sfpq	95	73.318	Cricetulus_griseus_crigri
ENSHBUG00000016818	sfpq	100	68.551	ENSCSEG00000007852	sfpq	100	70.029	Cynoglossus_semilaevis
ENSHBUG00000016818	sfpq	100	66.355	ENSCVAG00000019538	sfpq	100	66.578	Cyprinodon_variegatus
ENSHBUG00000016818	sfpq	63	78.271	ENSDARG00000011564	sfpq	100	84.348	Danio_rerio
ENSHBUG00000016818	sfpq	63	73.303	ENSDORG00000008109	Sfpq	63	72.973	Dipodomys_ordii
ENSHBUG00000016818	sfpq	61	67.517	ENSETEG00000001095	SFPQ	61	64.786	Echinops_telfairi
ENSHBUG00000016818	sfpq	63	73.529	ENSEASG00005012012	SFPQ	63	72.973	Equus_asinus_asinus
ENSHBUG00000016818	sfpq	63	73.529	ENSECAG00000000642	SFPQ	63	72.973	Equus_caballus
ENSHBUG00000016818	sfpq	64	78.032	ENSELUG00000023145	sfpq	99	60.237	Esox_lucius
ENSHBUG00000016818	sfpq	63	73.529	ENSFCAG00000042862	SFPQ	63	72.973	Felis_catus
ENSHBUG00000016818	sfpq	50	70.739	ENSFALG00000000731	SFPQ	100	69.886	Ficedula_albicollis
ENSHBUG00000016818	sfpq	50	62.890	ENSFDAG00000017723	-	100	64.589	Fukomys_damarensis
ENSHBUG00000016818	sfpq	100	67.557	ENSFHEG00000015200	sfpq	100	67.336	Fundulus_heteroclitus
ENSHBUG00000016818	sfpq	62	82.578	ENSGMOG00000011957	sfpq	66	81.647	Gadus_morhua
ENSHBUG00000016818	sfpq	83	84.248	ENSGMOG00000011950	SFPQ	99	84.248	Gadus_morhua
ENSHBUG00000016818	sfpq	61	73.550	ENSGALG00000002514	SFPQ	66	73.318	Gallus_gallus
ENSHBUG00000016818	sfpq	100	71.368	ENSGAFG00000014571	sfpq	100	71.227	Gambusia_affinis
ENSHBUG00000016818	sfpq	100	74.596	ENSGACG00000002034	sfpq	100	74.009	Gasterosteus_aculeatus
ENSHBUG00000016818	sfpq	55	80.282	ENSGGOG00000026354	SFPQ	100	71.307	Gorilla_gorilla
ENSHBUG00000016818	sfpq	63	72.809	ENSHGLG00000012001	SFPQ	64	72.260	Heterocephalus_glaber_female
ENSHBUG00000016818	sfpq	50	71.591	ENSHGLG00100004136	-	100	71.307	Heterocephalus_glaber_male
ENSHBUG00000016818	sfpq	100	65.600	ENSHCOG00000008612	sfpq	100	76.316	Hippocampus_comes
ENSHBUG00000016818	sfpq	63	77.494	ENSIPUG00000013076	SFPQ	76	75.506	Ictalurus_punctatus
ENSHBUG00000016818	sfpq	50	71.591	ENSSTOG00000014004	-	100	71.307	Ictidomys_tridecemlineatus
ENSHBUG00000016818	sfpq	63	73.303	ENSJJAG00000015633	Sfpq	63	72.973	Jaculus_jaculus
ENSHBUG00000016818	sfpq	100	66.160	ENSKMAG00000000238	sfpq	92	68.027	Kryptolebias_marmoratus
ENSHBUG00000016818	sfpq	100	69.417	ENSLBEG00000003163	sfpq	98	69.645	Labrus_bergylta
ENSHBUG00000016818	sfpq	77	62.360	ENSLACG00000014728	SFPQ	70	71.694	Latimeria_chalumnae
ENSHBUG00000016818	sfpq	89	59.133	ENSLOCG00000001067	sfpq	94	57.971	Lepisosteus_oculatus
ENSHBUG00000016818	sfpq	63	73.303	ENSLAFG00000015951	SFPQ	70	71.847	Loxodonta_africana
ENSHBUG00000016818	sfpq	63	73.529	ENSMFAG00000000797	SFPQ	63	72.973	Macaca_fascicularis
ENSHBUG00000016818	sfpq	63	73.529	ENSMMUG00000019154	SFPQ	63	72.973	Macaca_mulatta
ENSHBUG00000016818	sfpq	63	73.529	ENSMNEG00000038895	SFPQ	63	72.973	Macaca_nemestrina
ENSHBUG00000016818	sfpq	50	68.750	ENSMLEG00000010643	-	100	68.466	Mandrillus_leucophaeus
ENSHBUG00000016818	sfpq	100	77.500	ENSMAMG00000007875	sfpq	100	77.566	Mastacembelus_armatus
ENSHBUG00000016818	sfpq	100	98.366	ENSMZEG00005026091	sfpq	100	98.366	Maylandia_zebra
ENSHBUG00000016818	sfpq	51	75.000	ENSMGAG00000004237	SFPQ	100	69.133	Meleagris_gallopavo
ENSHBUG00000016818	sfpq	63	72.748	ENSMAUG00000006402	Sfpq	63	72.523	Mesocricetus_auratus
ENSHBUG00000016818	sfpq	63	73.303	ENSMICG00000027265	SFPQ	63	72.973	Microcebus_murinus
ENSHBUG00000016818	sfpq	63	69.820	ENSMOCG00000019075	Sfpq	91	70.270	Microtus_ochrogaster
ENSHBUG00000016818	sfpq	100	77.729	ENSMMOG00000001074	sfpq	100	75.074	Mola_mola
ENSHBUG00000016818	sfpq	63	73.243	ENSMODG00000017937	SFPQ	65	73.016	Monodelphis_domestica
ENSHBUG00000016818	sfpq	100	74.412	ENSMALG00000010381	sfpq	100	73.900	Monopterus_albus
ENSHBUG00000016818	sfpq	63	72.851	MGP_CAROLIEiJ_G0026487	Sfpq	63	72.297	Mus_caroli
ENSHBUG00000016818	sfpq	63	72.851	MGP_PahariEiJ_G0028818	Sfpq	63	72.297	Mus_pahari
ENSHBUG00000016818	sfpq	62	72.727	ENSMLUG00000027090	SFPQ	98	72.500	Myotis_lucifugus
ENSHBUG00000016818	sfpq	63	73.077	ENSNGAG00000000888	Sfpq	63	72.523	Nannospalax_galili
ENSHBUG00000016818	sfpq	100	97.177	ENSNBRG00000017479	sfpq	100	97.177	Neolamprologus_brichardi
ENSHBUG00000016818	sfpq	50	71.591	ENSNLEG00000035521	-	100	71.307	Nomascus_leucogenys
ENSHBUG00000016818	sfpq	63	73.288	ENSMEUG00000014082	SFPQ	63	73.864	Notamacropus_eugenii
ENSHBUG00000016818	sfpq	63	73.303	ENSOPRG00000013696	SFPQ	64	72.406	Ochotona_princeps
ENSHBUG00000016818	sfpq	61	64.066	ENSODEG00000005485	SFPQ	78	63.023	Octodon_degus
ENSHBUG00000016818	sfpq	100	96.160	ENSONIG00000017737	sfpq	100	95.840	Oreochromis_niloticus
ENSHBUG00000016818	sfpq	50	72.365	ENSOANG00000008789	-	100	72.080	Ornithorhynchus_anatinus
ENSHBUG00000016818	sfpq	63	73.409	ENSOCUG00000001877	SFPQ	86	74.091	Oryctolagus_cuniculus
ENSHBUG00000016818	sfpq	100	68.207	ENSORLG00000007459	sfpq	100	69.796	Oryzias_latipes
ENSHBUG00000016818	sfpq	100	69.418	ENSOMEG00000018020	sfpq	100	69.919	Oryzias_melastigma
ENSHBUG00000016818	sfpq	63	73.303	ENSOGAG00000027710	SFPQ	84	72.748	Otolemur_garnettii
ENSHBUG00000016818	sfpq	61	74.014	ENSOARG00000019439	SFPQ	66	73.782	Ovis_aries
ENSHBUG00000016818	sfpq	63	73.529	ENSPPAG00000030078	SFPQ	62	72.973	Pan_paniscus
ENSHBUG00000016818	sfpq	50	71.388	ENSPPRG00000015478	-	100	71.105	Panthera_pardus
ENSHBUG00000016818	sfpq	50	71.591	ENSPTIG00000007710	-	100	71.307	Panthera_tigris_altaica
ENSHBUG00000016818	sfpq	63	68.100	ENSPTRG00000000518	SFPQ	61	67.568	Pan_troglodytes
ENSHBUG00000016818	sfpq	63	73.303	ENSPANG00000005380	SFPQ	66	73.649	Papio_anubis
ENSHBUG00000016818	sfpq	73	73.453	ENSPKIG00000023035	sfpq	73	81.604	Paramormyrops_kingsleyae
ENSHBUG00000016818	sfpq	61	73.550	ENSPSIG00000011494	SFPQ	99	72.390	Pelodiscus_sinensis
ENSHBUG00000016818	sfpq	100	65.797	ENSPMGG00000023883	sfpq	100	63.861	Periophthalmus_magnuspinnatus
ENSHBUG00000016818	sfpq	63	72.523	ENSPEMG00000009794	Sfpq	91	73.198	Peromyscus_maniculatus_bairdii
ENSHBUG00000016818	sfpq	63	72.912	ENSPCIG00000000923	SFPQ	63	72.009	Phascolarctos_cinereus
ENSHBUG00000016818	sfpq	100	68.289	ENSPFOG00000003127	sfpq	100	68.439	Poecilia_formosa
ENSHBUG00000016818	sfpq	100	69.359	ENSPREG00000008060	sfpq	100	69.903	Poecilia_reticulata
ENSHBUG00000016818	sfpq	63	73.529	ENSPPYG00000001560	SFPQ	63	72.973	Pongo_abelii
ENSHBUG00000016818	sfpq	61	73.488	ENSPCAG00000006164	SFPQ	60	74.186	Procavia_capensis
ENSHBUG00000016818	sfpq	63	73.529	ENSPCOG00000027127	SFPQ	63	72.973	Propithecus_coquereli
ENSHBUG00000016818	sfpq	100	98.091	ENSPNYG00000007494	sfpq	100	98.091	Pundamilia_nyererei
ENSHBUG00000016818	sfpq	77	72.381	ENSPNAG00000002128	sfpq	99	61.493	Pygocentrus_nattereri
ENSHBUG00000016818	sfpq	63	72.851	ENSRNOG00000058461	Sfpq	63	72.624	Rattus_norvegicus
ENSHBUG00000016818	sfpq	63	66.968	ENSRBIG00000035286	SFPQ	100	71.307	Rhinopithecus_bieti
ENSHBUG00000016818	sfpq	63	73.303	ENSRROG00000040992	SFPQ	100	71.307	Rhinopithecus_roxellana
ENSHBUG00000016818	sfpq	50	71.591	ENSSBOG00000024972	-	100	71.307	Saimiri_boliviensis_boliviensis
ENSHBUG00000016818	sfpq	50	69.429	ENSSHAG00000012312	-	100	68.286	Sarcophilus_harrisii
ENSHBUG00000016818	sfpq	58	75.584	ENSSHAG00000016107	-	96	69.420	Sarcophilus_harrisii
ENSHBUG00000016818	sfpq	73	72.147	ENSSFOG00015009289	sfpq	83	77.412	Scleropages_formosus
ENSHBUG00000016818	sfpq	100	72.424	ENSSMAG00000018201	sfpq	100	73.730	Scophthalmus_maximus
ENSHBUG00000016818	sfpq	100	79.173	ENSSDUG00000008402	sfpq	100	79.764	Seriola_dumerili
ENSHBUG00000016818	sfpq	100	78.645	ENSSLDG00000018917	sfpq	100	79.381	Seriola_lalandi_dorsalis
ENSHBUG00000016818	sfpq	52	72.900	ENSSARG00000006409	SFPQ	100	72.629	Sorex_araneus
ENSHBUG00000016818	sfpq	100	82.769	ENSSPAG00000016550	sfpq	100	82.353	Stegastes_partitus
ENSHBUG00000016818	sfpq	63	73.529	ENSSSCG00000035690	SFPQ	63	72.973	Sus_scrofa
ENSHBUG00000016818	sfpq	61	73.086	ENSTGUG00000001722	SFPQ	99	72.390	Taeniopygia_guttata
ENSHBUG00000016818	sfpq	100	72.350	ENSTRUG00000003783	sfpq	100	73.585	Takifugu_rubripes
ENSHBUG00000016818	sfpq	87	76.401	ENSTNIG00000011331	sfpq	99	68.799	Tetraodon_nigroviridis
ENSHBUG00000016818	sfpq	63	71.136	ENSTTRG00000013930	SFPQ	63	70.429	Tursiops_truncatus
ENSHBUG00000016818	sfpq	50	69.318	ENSUMAG00000008056	-	100	69.034	Ursus_maritimus
ENSHBUG00000016818	sfpq	50	65.330	ENSVVUG00000000874	-	100	65.903	Vulpes_vulpes
ENSHBUG00000016818	sfpq	65	69.249	ENSXETG00000009682	sfpq	98	78.652	Xenopus_tropicalis
ENSHBUG00000016818	sfpq	100	70.117	ENSXMAG00000016391	sfpq	100	70.760	Xiphophorus_maculatus