EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000016897 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3682 bases
Position: chrJH425704.1:510004-513685
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000031315	RRM_1	PF00076.22	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023160	-	2518	-	ENSHBUP00000031315	110 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000016897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000016897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000016897	-	72	42.683	ENSHBUG00000003073	srsf3b	61	44.737
ENSHBUG00000016897	-	63	75.362	ENSHBUG00000012462	srsf5b	50	75.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000016897	-	79	86.207	ENSG00000116350	SRSF4	53	87.500	Homo_sapiens
ENSHBUG00000016897	-	81	100.000	ENSACIG00000018649	srsf4	75	100.000	Amphilophus_citrinellus
ENSHBUG00000016897	-	97	82.243	ENSAPEG00000020870	-	71	82.243	Amphiprion_percula
ENSHBUG00000016897	-	98	91.071	ENSACLG00000003395	srsf4	74	100.000	Astatotilapia_calliptera
ENSHBUG00000016897	-	83	82.418	ENSAMXG00000034811	srsf4	75	90.789	Astyanax_mexicanus
ENSHBUG00000016897	-	71	92.308	ENSDARG00000105293	srsf4	72	92.105	Danio_rerio
ENSHBUG00000016897	-	67	68.919	FBgn0004587	B52	55	68.919	Drosophila_melanogaster
ENSHBUG00000016897	-	79	80.460	ENSELUG00000017551	srsf4	61	80.460	Esox_lucius
ENSHBUG00000016897	-	91	82.000	ENSFHEG00000007472	srsf4	88	97.561	Fundulus_heteroclitus
ENSHBUG00000016897	-	77	98.824	ENSLBEG00000017163	-	79	98.824	Labrus_bergylta
ENSHBUG00000016897	-	100	98.198	ENSMZEG00005025078	-	100	98.198	Maylandia_zebra
ENSHBUG00000016897	-	98	91.071	ENSMZEG00005026275	srsf4	74	100.000	Maylandia_zebra
ENSHBUG00000016897	-	78	70.930	ENSMALG00000010062	-	81	77.333	Monopterus_albus
ENSHBUG00000016897	-	100	97.273	ENSNBRG00000014840	-	100	97.273	Neolamprologus_brichardi
ENSHBUG00000016897	-	75	98.795	ENSORLG00000028783	-	75	98.795	Oryzias_latipes
ENSHBUG00000016897	-	91	86.000	ENSPMGG00000013436	srsf4	57	97.368	Periophthalmus_magnuspinnatus
ENSHBUG00000016897	-	79	90.805	ENSSFOG00015020292	srsf4	71	96.053	Scleropages_formosus
ENSHBUG00000016897	-	75	84.337	ENSSPUG00000019124	-	85	86.842	Sphenodon_punctatus
ENSHBUG00000016897	-	99	77.982	ENSSPAG00000014538	srsf4	94	78.641	Stegastes_partitus
ENSHBUG00000016897	-	98	80.556	ENSXCOG00000018826	srsf4	58	98.684	Xiphophorus_couchianus
ENSHBUG00000016897	-	75	97.561	ENSXMAG00000021549	-	69	97.561	Xiphophorus_maculatus