EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000017033 (Gene tree)
Gene ID: 102305453
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12264 bases
Position: chrJH425704.1:462742-475005
Accession: 102305453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000031349	DEAD	PF00270.29	1.9e-42	1	1
ENSHBUP00000031360	DEAD	PF00270.29	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023254	-	1362	-	ENSHBUP00000031349	453 (aa)	-	-
ENSHBUT00000023278	-	6435	XM_005943573	ENSHBUP00000031360	487 (aa)	XP_005943635	UPI00032A1403

Gene Model

Click here to download ENSHBUG00000017033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000017033	-	67	45.098	ENSHBUG00000014069	ddx1	52	45.098
ENSHBUG00000017033	-	99	87.759	ENSHBUG00000017832	ddx61	99	87.759
ENSHBUG00000017033	-	77	32.283	ENSHBUG00000022213	ddx47	78	32.283
ENSHBUG00000017033	-	76	40.054	ENSHBUG00000018048	eif4a2	92	40.054
ENSHBUG00000017033	-	78	30.348	ENSHBUG00000001897	ddx4	66	30.348
ENSHBUG00000017033	-	75	30.239	ENSHBUG00000010971	DDX41	60	30.239
ENSHBUG00000017033	-	97	79.839	ENSHBUG00000009651	ddx6	99	82.268
ENSHBUG00000017033	-	79	34.171	ENSHBUG00000007853	ddx20	50	34.171
ENSHBUG00000017033	-	68	31.180	ENSHBUG00000011523	ddx55	60	31.180
ENSHBUG00000017033	-	76	30.263	ENSHBUG00000007049	ddx59	59	30.263
ENSHBUG00000017033	-	81	36.341	ENSHBUG00000020257	DDX39A	93	36.341
ENSHBUG00000017033	-	76	30.105	ENSHBUG00000002856	DDX5	57	30.685
ENSHBUG00000017033	-	81	35.840	ENSHBUG00000003748	ddx39aa	93	35.840
ENSHBUG00000017033	-	76	31.343	ENSHBUG00000009486	-	58	30.310
ENSHBUG00000017033	-	79	30.982	ENSHBUG00000008991	ddx49	83	30.982
ENSHBUG00000017033	-	72	31.667	ENSHBUG00000021303	si:dkey-156n14.5	56	31.452
ENSHBUG00000017033	-	76	31.643	ENSHBUG00000011876	ddx23	52	31.655
ENSHBUG00000017033	-	76	31.818	ENSHBUG00000002311	-	67	31.818
ENSHBUG00000017033	-	77	37.302	ENSHBUG00000014892	eif4a3	92	37.302
ENSHBUG00000017033	-	71	34.181	ENSHBUG00000011653	ddx43	51	34.181
ENSHBUG00000017033	-	71	37.047	ENSHBUG00000001269	ddx19	78	37.047
ENSHBUG00000017033	-	72	31.944	ENSHBUG00000022268	DDX17	57	31.944
ENSHBUG00000017033	-	66	31.915	ENSHBUG00000001204	ddx18	50	31.915
ENSHBUG00000017033	-	76	39.247	ENSHBUG00000004845	eif4a1b	92	39.247
ENSHBUG00000017033	-	72	34.688	ENSHBUG00000006785	zgc:193690	75	34.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017033	-	98	87.657	ENSAPOG00000014829	ddx61	98	87.657	Acanthochromis_polyacanthus
ENSHBUG00000017033	-	77	97.067	ENSAPOG00000023627	-	95	97.067	Acanthochromis_polyacanthus
ENSHBUG00000017033	-	100	98.896	ENSACIG00000018355	-	100	98.896	Amphilophus_citrinellus
ENSHBUG00000017033	-	100	96.524	ENSAOCG00000006269	-	100	96.524	Amphiprion_ocellaris
ENSHBUG00000017033	-	98	88.703	ENSAOCG00000007627	ddx61	98	88.703	Amphiprion_ocellaris
ENSHBUG00000017033	-	98	88.703	ENSAPEG00000007293	ddx61	98	88.703	Amphiprion_percula
ENSHBUG00000017033	-	100	96.524	ENSAPEG00000021368	-	100	96.524	Amphiprion_percula
ENSHBUG00000017033	-	100	96.524	ENSAPEG00000020642	-	100	96.524	Amphiprion_percula
ENSHBUG00000017033	-	100	95.910	ENSATEG00000005424	-	100	95.910	Anabas_testudineus
ENSHBUG00000017033	-	97	87.738	ENSATEG00000011302	ddx61	99	87.288	Anabas_testudineus
ENSHBUG00000017033	-	99	87.552	ENSACLG00000027620	ddx61	99	87.552	Astatotilapia_calliptera
ENSHBUG00000017033	-	100	100.000	ENSACLG00000003260	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000017033	-	99	88.454	ENSAMXG00000033980	-	98	88.454	Astyanax_mexicanus
ENSHBUG00000017033	-	97	87.815	ENSAMXG00000032542	ddx61	99	86.680	Astyanax_mexicanus
ENSHBUG00000017033	-	100	94.274	ENSCSEG00000009893	-	100	94.274	Cynoglossus_semilaevis
ENSHBUG00000017033	-	100	92.638	ENSCVAG00000011006	-	100	92.638	Cyprinodon_variegatus
ENSHBUG00000017033	-	97	87.076	ENSDARG00000018425	ddx61	98	87.076	Danio_rerio
ENSHBUG00000017033	-	99	89.004	ENSELUG00000020545	ddx61	99	89.004	Esox_lucius
ENSHBUG00000017033	-	99	89.775	ENSELUG00000022538	-	99	89.775	Esox_lucius
ENSHBUG00000017033	-	100	93.252	ENSFHEG00000015487	-	100	93.252	Fundulus_heteroclitus
ENSHBUG00000017033	-	97	87.841	ENSGMOG00000013762	ddx61	99	87.526	Gadus_morhua
ENSHBUG00000017033	-	71	87.462	ENSGMOG00000003561	-	100	88.146	Gadus_morhua
ENSHBUG00000017033	-	100	92.449	ENSGAFG00000015865	-	100	92.449	Gambusia_affinis
ENSHBUG00000017033	-	99	94.813	ENSGACG00000002413	-	99	94.813	Gasterosteus_aculeatus
ENSHBUG00000017033	-	99	86.420	ENSGACG00000003401	ddx61	100	86.420	Gasterosteus_aculeatus
ENSHBUG00000017033	-	97	85.169	ENSHCOG00000008184	ddx61	97	85.169	Hippocampus_comes
ENSHBUG00000017033	-	100	90.593	ENSHCOG00000012238	-	100	90.593	Hippocampus_comes
ENSHBUG00000017033	-	97	89.641	ENSIPUG00000008367	-	98	89.263	Ictalurus_punctatus
ENSHBUG00000017033	-	96	86.325	ENSIPUG00000012823	DDX6	99	85.031	Ictalurus_punctatus
ENSHBUG00000017033	-	100	95.483	ENSKMAG00000007213	-	100	95.483	Kryptolebias_marmoratus
ENSHBUG00000017033	-	97	88.397	ENSLBEG00000001740	ddx61	98	88.397	Labrus_bergylta
ENSHBUG00000017033	-	100	93.750	ENSLBEG00000016890	-	100	93.750	Labrus_bergylta
ENSHBUG00000017033	-	98	84.232	ENSLACG00000015214	ddx61	100	84.232	Latimeria_chalumnae
ENSHBUG00000017033	-	96	52.632	ENSLOCG00000004352	ddx61	94	53.318	Lepisosteus_oculatus
ENSHBUG00000017033	-	100	95.918	ENSMAMG00000005559	-	100	95.918	Mastacembelus_armatus
ENSHBUG00000017033	-	99	87.010	ENSMAMG00000005321	ddx61	99	87.010	Mastacembelus_armatus
ENSHBUG00000017033	-	99	87.759	ENSMZEG00005003556	ddx61	99	87.759	Maylandia_zebra
ENSHBUG00000017033	-	100	100.000	ENSMZEG00005026268	-	100	100.000	Maylandia_zebra
ENSHBUG00000017033	-	100	85.481	ENSMMOG00000013694	-	100	85.481	Mola_mola
ENSHBUG00000017033	-	72	77.054	ENSMMOG00000008825	-	92	77.054	Mola_mola
ENSHBUG00000017033	-	96	86.994	ENSMMOG00000007415	ddx61	97	86.994	Mola_mola
ENSHBUG00000017033	-	100	94.070	ENSMALG00000013817	-	100	94.070	Monopterus_albus
ENSHBUG00000017033	-	97	82.472	ENSMALG00000013776	ddx61	96	82.472	Monopterus_albus
ENSHBUG00000017033	-	100	99.558	ENSNBRG00000015075	-	100	99.558	Neolamprologus_brichardi
ENSHBUG00000017033	-	98	87.162	ENSNBRG00000015800	ddx61	99	87.162	Neolamprologus_brichardi
ENSHBUG00000017033	-	100	99.795	ENSONIG00000013748	-	100	99.795	Oreochromis_niloticus
ENSHBUG00000017033	-	98	87.866	ENSONIG00000011418	ddx61	99	87.866	Oreochromis_niloticus
ENSHBUG00000017033	-	100	93.224	ENSORLG00000009178	-	100	93.224	Oryzias_latipes
ENSHBUG00000017033	-	100	93.429	ENSORLG00020015515	-	100	93.429	Oryzias_latipes_hni
ENSHBUG00000017033	-	100	93.224	ENSORLG00015006764	-	100	93.224	Oryzias_latipes_hsok
ENSHBUG00000017033	-	97	86.017	ENSOMEG00000022326	-	99	86.017	Oryzias_melastigma
ENSHBUG00000017033	-	97	90.546	ENSPKIG00000024264	ddx61	98	90.021	Paramormyrops_kingsleyae
ENSHBUG00000017033	-	100	89.868	ENSPMGG00000013355	-	100	89.868	Periophthalmus_magnuspinnatus
ENSHBUG00000017033	-	100	92.886	ENSPFOG00000005750	-	100	92.886	Poecilia_formosa
ENSHBUG00000017033	-	100	92.886	ENSPLAG00000000403	-	100	92.886	Poecilia_latipinna
ENSHBUG00000017033	-	100	93.033	ENSPMEG00000023737	-	100	93.033	Poecilia_mexicana
ENSHBUG00000017033	-	99	81.503	ENSPNYG00000015045	ddx61	99	81.503	Pundamilia_nyererei
ENSHBUG00000017033	-	100	100.000	ENSPNYG00000003986	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000017033	-	99	90.083	ENSPNAG00000008742	-	98	90.083	Pygocentrus_nattereri
ENSHBUG00000017033	-	98	87.083	ENSPNAG00000024072	ddx61	99	87.083	Pygocentrus_nattereri
ENSHBUG00000017033	-	97	89.451	ENSSFOG00015021404	ddx61	97	88.773	Scleropages_formosus
ENSHBUG00000017033	-	96	88.486	ENSSMAG00000006591	ddx61	97	87.789	Scophthalmus_maximus
ENSHBUG00000017033	-	100	94.479	ENSSMAG00000001793	-	100	94.479	Scophthalmus_maximus
ENSHBUG00000017033	-	96	89.126	ENSSDUG00000009713	ddx61	99	86.680	Seriola_dumerili
ENSHBUG00000017033	-	100	96.531	ENSSDUG00000007530	-	100	96.531	Seriola_dumerili
ENSHBUG00000017033	-	96	89.126	ENSSLDG00000000132	ddx61	99	86.680	Seriola_lalandi_dorsalis
ENSHBUG00000017033	-	100	96.531	ENSSLDG00000007608	-	100	96.531	Seriola_lalandi_dorsalis
ENSHBUG00000017033	-	100	97.137	ENSSPAG00000013878	-	100	97.137	Stegastes_partitus
ENSHBUG00000017033	-	96	90.171	ENSSPAG00000001578	ddx61	99	88.017	Stegastes_partitus
ENSHBUG00000017033	-	99	90.369	ENSTRUG00000012432	-	99	90.369	Takifugu_rubripes
ENSHBUG00000017033	-	99	91.250	ENSTNIG00000003560	-	100	91.250	Tetraodon_nigroviridis
ENSHBUG00000017033	-	100	82.857	ENSXCOG00000001406	-	100	82.857	Xiphophorus_couchianus
ENSHBUG00000017033	-	100	92.857	ENSXMAG00000016090	-	100	92.857	Xiphophorus_maculatus