EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017066 (Gene tree)
Gene ID: 102296862
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 8899 bases
Position: chrJH425733.1:393910-402808
Accession: 102296862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015174	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023352	-	1391	XM_005944370	ENSHBUP00000015174	343 (aa)	XP_005944432	UPI0003BC9CB1

Gene Model

Click here to download ENSHBUG00000017066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017066	snrnp48	83	45.578	ENSG00000168566	SNRNP48	85	39.062	Homo_sapiens
ENSHBUG00000017066	snrnp48	94	81.677	ENSAPOG00000021430	snrnp48	93	81.962	Acanthochromis_polyacanthus
ENSHBUG00000017066	snrnp48	95	42.529	ENSAMEG00000017349	SNRNP48	73	48.235	Ailuropoda_melanoleuca
ENSHBUG00000017066	snrnp48	92	81.013	ENSACIG00000002032	snrnp48	93	81.013	Amphilophus_citrinellus
ENSHBUG00000017066	snrnp48	94	80.435	ENSAOCG00000010562	snrnp48	93	80.380	Amphiprion_ocellaris
ENSHBUG00000017066	snrnp48	94	80.435	ENSAPEG00000003231	snrnp48	93	79.747	Amphiprion_percula
ENSHBUG00000017066	snrnp48	90	81.029	ENSATEG00000020210	snrnp48	94	79.683	Anabas_testudineus
ENSHBUG00000017066	snrnp48	80	48.299	ENSACAG00000002811	SNRNP48	62	53.960	Anolis_carolinensis
ENSHBUG00000017066	snrnp48	83	45.918	ENSANAG00000033538	SNRNP48	76	47.893	Aotus_nancymaae
ENSHBUG00000017066	snrnp48	93	57.632	ENSAMXG00000015309	snrnp48	95	58.307	Astyanax_mexicanus
ENSHBUG00000017066	snrnp48	96	40.390	ENSBTAG00000001123	SNRNP48	76	46.768	Bos_taurus
ENSHBUG00000017066	snrnp48	95	40.571	ENSCJAG00000021330	SNRNP48	97	43.373	Callithrix_jacchus
ENSHBUG00000017066	snrnp48	95	41.667	ENSCAFG00000009574	SNRNP48	81	40.882	Canis_familiaris
ENSHBUG00000017066	snrnp48	95	41.840	ENSCAFG00020013203	SNRNP48	96	40.588	Canis_lupus_dingo
ENSHBUG00000017066	snrnp48	90	41.003	ENSCHIG00000015216	SNRNP48	74	47.674	Capra_hircus
ENSHBUG00000017066	snrnp48	83	44.898	ENSTSYG00000000698	SNRNP48	76	46.743	Carlito_syrichta
ENSHBUG00000017066	snrnp48	86	41.745	ENSCAPG00000006768	SNRNP48	73	49.333	Cavia_aperea
ENSHBUG00000017066	snrnp48	96	41.457	ENSCPOG00000007910	SNRNP48	76	48.276	Cavia_porcellus
ENSHBUG00000017066	snrnp48	80	46.316	ENSCCAG00000035652	SNRNP48	75	48.235	Cebus_capucinus
ENSHBUG00000017066	snrnp48	96	42.000	ENSCATG00000033947	SNRNP48	88	39.844	Cercocebus_atys
ENSHBUG00000017066	snrnp48	83	46.939	ENSCLAG00000003765	SNRNP48	76	49.042	Chinchilla_lanigera
ENSHBUG00000017066	snrnp48	83	45.918	ENSCSAG00000007409	SNRNP48	76	47.893	Chlorocebus_sabaeus
ENSHBUG00000017066	snrnp48	82	43.548	ENSCPBG00000019146	SNRNP48	65	51.923	Chrysemys_picta_bellii
ENSHBUG00000017066	snrnp48	83	45.918	ENSCANG00000030017	SNRNP48	76	47.893	Colobus_angolensis_palliatus
ENSHBUG00000017066	snrnp48	95	41.813	ENSCGRG00001001076	-	75	47.266	Cricetulus_griseus_chok1gshd
ENSHBUG00000017066	snrnp48	81	39.236	ENSCGRG00001008805	-	80	41.406	Cricetulus_griseus_chok1gshd
ENSHBUG00000017066	snrnp48	95	41.813	ENSCGRG00000007781	Snrnp48	75	47.266	Cricetulus_griseus_crigri
ENSHBUG00000017066	snrnp48	93	68.536	ENSCSEG00000000722	snrnp48	90	69.085	Cynoglossus_semilaevis
ENSHBUG00000017066	snrnp48	91	78.662	ENSCVAG00000019829	snrnp48	81	78.662	Cyprinodon_variegatus
ENSHBUG00000017066	snrnp48	91	52.012	ENSDARG00000039989	snrnp48	93	54.259	Danio_rerio
ENSHBUG00000017066	snrnp48	97	41.989	ENSDNOG00000014978	SNRNP48	98	42.815	Dasypus_novemcinctus
ENSHBUG00000017066	snrnp48	96	41.899	ENSDORG00000015140	Snrnp48	76	47.710	Dipodomys_ordii
ENSHBUG00000017066	snrnp48	82	44.983	ENSEASG00005012021	SNRNP48	74	46.875	Equus_asinus_asinus
ENSHBUG00000017066	snrnp48	95	40.286	ENSECAG00000026937	SNRNP48	97	42.773	Equus_caballus
ENSHBUG00000017066	snrnp48	83	62.543	ENSELUG00000009766	snrnp48	76	62.909	Esox_lucius
ENSHBUG00000017066	snrnp48	97	40.449	ENSFCAG00000018853	SNRNP48	98	42.442	Felis_catus
ENSHBUG00000017066	snrnp48	68	56.485	ENSFALG00000007797	SNRNP48	64	59.606	Ficedula_albicollis
ENSHBUG00000017066	snrnp48	96	42.735	ENSFDAG00000009231	SNRNP48	76	47.893	Fukomys_damarensis
ENSHBUG00000017066	snrnp48	64	81.900	ENSFHEG00000014647	snrnp48	93	79.478	Fundulus_heteroclitus
ENSHBUG00000017066	snrnp48	89	60.748	ENSGMOG00000018599	-	78	68.675	Gadus_morhua
ENSHBUG00000017066	snrnp48	75	53.030	ENSGALG00000013005	SNRNP48	68	59.606	Gallus_gallus
ENSHBUG00000017066	snrnp48	94	74.540	ENSGAFG00000021639	snrnp48	94	74.766	Gambusia_affinis
ENSHBUG00000017066	snrnp48	72	77.510	ENSGACG00000017756	-	96	70.898	Gasterosteus_aculeatus
ENSHBUG00000017066	snrnp48	81	43.506	ENSGAGG00000000865	SNRNP48	68	51.442	Gopherus_agassizii
ENSHBUG00000017066	snrnp48	83	45.918	ENSGGOG00000013220	SNRNP48	76	47.893	Gorilla_gorilla
ENSHBUG00000017066	snrnp48	83	45.578	ENSHGLG00000015241	SNRNP48	76	47.510	Heterocephalus_glaber_female
ENSHBUG00000017066	snrnp48	83	45.578	ENSHGLG00100010027	SNRNP48	76	47.510	Heterocephalus_glaber_male
ENSHBUG00000017066	snrnp48	73	75.494	ENSHCOG00000014066	snrnp48	93	69.969	Hippocampus_comes
ENSHBUG00000017066	snrnp48	97	40.730	ENSSTOG00000014635	SNRNP48	98	43.491	Ictidomys_tridecemlineatus
ENSHBUG00000017066	snrnp48	83	46.599	ENSJJAG00000011495	Snrnp48	76	48.276	Jaculus_jaculus
ENSHBUG00000017066	snrnp48	94	77.950	ENSKMAG00000016514	snrnp48	93	78.233	Kryptolebias_marmoratus
ENSHBUG00000017066	snrnp48	94	77.640	ENSLBEG00000026249	snrnp48	93	77.603	Labrus_bergylta
ENSHBUG00000017066	snrnp48	88	47.273	ENSLACG00000003958	SNRNP48	73	51.600	Latimeria_chalumnae
ENSHBUG00000017066	snrnp48	81	60.000	ENSLOCG00000004187	snrnp48	79	59.851	Lepisosteus_oculatus
ENSHBUG00000017066	snrnp48	83	45.085	ENSLAFG00000011152	SNRNP48	76	46.947	Loxodonta_africana
ENSHBUG00000017066	snrnp48	83	45.918	ENSMFAG00000045216	SNRNP48	88	39.844	Macaca_fascicularis
ENSHBUG00000017066	snrnp48	83	45.918	ENSMMUG00000014785	SNRNP48	76	47.893	Macaca_mulatta
ENSHBUG00000017066	snrnp48	82	46.367	ENSMNEG00000042269	SNRNP48	76	47.893	Macaca_nemestrina
ENSHBUG00000017066	snrnp48	83	45.918	ENSMLEG00000034004	SNRNP48	88	39.844	Mandrillus_leucophaeus
ENSHBUG00000017066	snrnp48	91	76.433	ENSMAMG00000018673	snrnp48	82	74.763	Mastacembelus_armatus
ENSHBUG00000017066	snrnp48	80	48.845	ENSMGAG00000006037	SNRNP48	96	50.526	Meleagris_gallopavo
ENSHBUG00000017066	snrnp48	95	42.515	ENSMAUG00000011944	Snrnp48	75	47.656	Mesocricetus_auratus
ENSHBUG00000017066	snrnp48	83	45.763	ENSMICG00000012497	SNRNP48	76	47.328	Microcebus_murinus
ENSHBUG00000017066	snrnp48	95	43.452	ENSMOCG00000015555	Snrnp48	76	48.837	Microtus_ochrogaster
ENSHBUG00000017066	snrnp48	55	83.684	ENSMMOG00000003072	-	60	83.684	Mola_mola
ENSHBUG00000017066	snrnp48	82	47.099	ENSMODG00000009996	SNRNP48	69	48.047	Monodelphis_domestica
ENSHBUG00000017066	snrnp48	94	79.503	ENSMALG00000005725	snrnp48	93	79.495	Monopterus_albus
ENSHBUG00000017066	snrnp48	95	42.105	MGP_CAROLIEiJ_G0018441	Snrnp48	75	47.656	Mus_caroli
ENSHBUG00000017066	snrnp48	95	42.105	ENSMUSG00000021431	Snrnp48	75	47.656	Mus_musculus
ENSHBUG00000017066	snrnp48	95	42.690	MGP_PahariEiJ_G0019509	Snrnp48	75	48.047	Mus_pahari
ENSHBUG00000017066	snrnp48	95	42.105	MGP_SPRETEiJ_G0019321	Snrnp48	75	47.656	Mus_spretus
ENSHBUG00000017066	snrnp48	95	43.228	ENSNGAG00000004849	Snrnp48	97	41.765	Nannospalax_galili
ENSHBUG00000017066	snrnp48	100	98.251	ENSNBRG00000012127	snrnp48	100	98.251	Neolamprologus_brichardi
ENSHBUG00000017066	snrnp48	83	45.918	ENSNLEG00000011667	SNRNP48	76	47.893	Nomascus_leucogenys
ENSHBUG00000017066	snrnp48	82	46.853	ENSOPRG00000015471	SNRNP48	78	49.407	Ochotona_princeps
ENSHBUG00000017066	snrnp48	100	96.793	ENSONIG00000001520	snrnp48	100	96.793	Oreochromis_niloticus
ENSHBUG00000017066	snrnp48	54	36.232	ENSOANG00000019888	-	99	37.198	Ornithorhynchus_anatinus
ENSHBUG00000017066	snrnp48	78	46.715	ENSOCUG00000005168	SNRNP48	84	47.893	Oryctolagus_cuniculus
ENSHBUG00000017066	snrnp48	87	79.798	ENSORLG00000015654	snrnp48	92	78.549	Oryzias_latipes
ENSHBUG00000017066	snrnp48	87	79.125	ENSORLG00020015976	snrnp48	79	78.864	Oryzias_latipes_hni
ENSHBUG00000017066	snrnp48	87	78.114	ENSORLG00015022379	snrnp48	79	77.918	Oryzias_latipes_hsok
ENSHBUG00000017066	snrnp48	92	76.656	ENSOMEG00000022007	snrnp48	93	76.656	Oryzias_melastigma
ENSHBUG00000017066	snrnp48	94	42.121	ENSOGAG00000005275	SNRNP48	96	41.818	Otolemur_garnettii
ENSHBUG00000017066	snrnp48	80	46.154	ENSOARG00000017319	SNRNP48	70	53.202	Ovis_aries
ENSHBUG00000017066	snrnp48	83	45.918	ENSPPAG00000032873	SNRNP48	76	47.893	Pan_paniscus
ENSHBUG00000017066	snrnp48	95	40.456	ENSPPRG00000004283	SNRNP48	98	42.151	Panthera_pardus
ENSHBUG00000017066	snrnp48	81	42.424	ENSPTIG00000013502	SNRNP48	96	44.912	Panthera_tigris_altaica
ENSHBUG00000017066	snrnp48	83	45.918	ENSPTRG00000017703	SNRNP48	76	47.893	Pan_troglodytes
ENSHBUG00000017066	snrnp48	83	45.918	ENSPANG00000000771	SNRNP48	88	39.844	Papio_anubis
ENSHBUG00000017066	snrnp48	87	56.790	ENSPKIG00000013703	snrnp48	51	65.145	Paramormyrops_kingsleyae
ENSHBUG00000017066	snrnp48	84	44.966	ENSPSIG00000002213	SNRNP48	64	53.659	Pelodiscus_sinensis
ENSHBUG00000017066	snrnp48	75	66.160	ENSPMGG00000008120	snrnp48	92	66.154	Periophthalmus_magnuspinnatus
ENSHBUG00000017066	snrnp48	95	42.982	ENSPEMG00000008872	Snrnp48	75	48.828	Peromyscus_maniculatus_bairdii
ENSHBUG00000017066	snrnp48	94	76.074	ENSPFOG00000003578	snrnp48	94	76.636	Poecilia_formosa
ENSHBUG00000017066	snrnp48	69	78.390	ENSPLAG00000002290	snrnp48	82	78.390	Poecilia_latipinna
ENSHBUG00000017066	snrnp48	94	76.074	ENSPMEG00000018033	snrnp48	94	76.636	Poecilia_mexicana
ENSHBUG00000017066	snrnp48	94	74.540	ENSPREG00000018541	snrnp48	94	75.078	Poecilia_reticulata
ENSHBUG00000017066	snrnp48	83	45.238	ENSPPYG00000016209	SNRNP48	76	47.126	Pongo_abelii
ENSHBUG00000017066	snrnp48	71	37.500	ENSPCAG00000011991	SNRNP48	94	38.281	Procavia_capensis
ENSHBUG00000017066	snrnp48	83	46.959	ENSPVAG00000002854	SNRNP48	76	48.669	Pteropus_vampyrus
ENSHBUG00000017066	snrnp48	91	99.357	ENSPNYG00000015399	snrnp48	100	99.357	Pundamilia_nyererei
ENSHBUG00000017066	snrnp48	95	42.982	ENSRNOG00000013756	Snrnp48	75	48.438	Rattus_norvegicus
ENSHBUG00000017066	snrnp48	82	46.367	ENSRBIG00000043856	SNRNP48	82	47.893	Rhinopithecus_bieti
ENSHBUG00000017066	snrnp48	83	45.918	ENSRROG00000043229	SNRNP48	76	47.893	Rhinopithecus_roxellana
ENSHBUG00000017066	snrnp48	83	46.259	ENSSBOG00000019486	SNRNP48	76	48.276	Saimiri_boliviensis_boliviensis
ENSHBUG00000017066	snrnp48	83	47.157	ENSSHAG00000014483	SNRNP48	74	48.092	Sarcophilus_harrisii
ENSHBUG00000017066	snrnp48	72	59.924	ENSSFOG00015006610	snrnp48	62	59.924	Scleropages_formosus
ENSHBUG00000017066	snrnp48	94	78.505	ENSSDUG00000014953	snrnp48	93	78.797	Seriola_dumerili
ENSHBUG00000017066	snrnp48	94	78.505	ENSSLDG00000005989	snrnp48	93	78.797	Seriola_lalandi_dorsalis
ENSHBUG00000017066	snrnp48	70	50.400	ENSSPUG00000006257	SNRNP48	59	53.333	Sphenodon_punctatus
ENSHBUG00000017066	snrnp48	94	82.866	ENSSPAG00000006454	snrnp48	94	82.911	Stegastes_partitus
ENSHBUG00000017066	snrnp48	84	48.658	ENSTGUG00000007575	SNRNP48	66	58.571	Taeniopygia_guttata
ENSHBUG00000017066	snrnp48	74	74.118	ENSTRUG00000007031	snrnp48	93	70.312	Takifugu_rubripes
ENSHBUG00000017066	snrnp48	99	65.689	ENSTNIG00000012977	-	91	65.839	Tetraodon_nigroviridis
ENSHBUG00000017066	snrnp48	76	47.584	ENSTBEG00000015620	SNRNP48	76	47.510	Tupaia_belangeri
ENSHBUG00000017066	snrnp48	91	42.183	ENSTTRG00000016715	SNRNP48	98	43.440	Tursiops_truncatus
ENSHBUG00000017066	snrnp48	95	42.815	ENSUAMG00000003690	SNRNP48	76	47.692	Ursus_americanus
ENSHBUG00000017066	snrnp48	66	49.138	ENSVPAG00000003557	SNRNP48	70	51.724	Vicugna_pacos
ENSHBUG00000017066	snrnp48	95	42.136	ENSVVUG00000004996	SNRNP48	96	41.935	Vulpes_vulpes
ENSHBUG00000017066	snrnp48	88	44.590	ENSXETG00000020447	snrnp48	76	46.591	Xenopus_tropicalis
ENSHBUG00000017066	snrnp48	69	77.637	ENSXCOG00000004478	snrnp48	93	64.465	Xiphophorus_couchianus
ENSHBUG00000017066	snrnp48	94	75.610	ENSXMAG00000013595	snrnp48	94	76.012	Xiphophorus_maculatus