EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017131 (Gene tree)
Gene ID: 102312242
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 6277 bases
Position: chrJH425549.1:804819-811095
Accession: 102312242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015230	Methyltransf_8	PF05148.15	4.1e-90	1	1
ENSHBUP00000015236	Methyltransf_8	PF05148.15	4.1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023436	-	2540	XM_005937521	ENSHBUP00000015230	537 (aa)	XP_005937583	UPI0003BD3D68
ENSHBUT00000033705	-	2658	-	ENSHBUP00000015236	537 (aa)	-	UPI0003BD3D68

Gene Model

Click here to download ENSHBUG00000017131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017131	rrp8	100	66.608	ENSAPOG00000008509	-	100	66.254	Acanthochromis_polyacanthus
ENSHBUG00000017131	rrp8	100	66.608	ENSAPOG00000010798	-	98	66.254	Acanthochromis_polyacanthus
ENSHBUG00000017131	rrp8	100	66.608	ENSAPOG00000010806	rrp8	98	66.254	Acanthochromis_polyacanthus
ENSHBUG00000017131	rrp8	93	75.542	ENSACIG00000019896	rrp8	99	75.937	Amphilophus_citrinellus
ENSHBUG00000017131	rrp8	100	66.784	ENSAOCG00000008785	rrp8	100	66.784	Amphiprion_ocellaris
ENSHBUG00000017131	rrp8	100	67.138	ENSAPEG00000008416	rrp8	100	67.138	Amphiprion_percula
ENSHBUG00000017131	rrp8	93	65.465	ENSATEG00000014110	rrp8	98	64.896	Anabas_testudineus
ENSHBUG00000017131	rrp8	100	98.510	ENSACLG00000002746	rrp8	100	98.510	Astatotilapia_calliptera
ENSHBUG00000017131	rrp8	100	47.679	ENSAMXG00000005164	rrp8	98	47.253	Astyanax_mexicanus
ENSHBUG00000017131	rrp8	56	38.889	ENSCING00000003281	-	88	38.889	Ciona_intestinalis
ENSHBUG00000017131	rrp8	72	40.695	ENSCSAVG00000006435	-	90	41.687	Ciona_savignyi
ENSHBUG00000017131	rrp8	70	64.249	ENSCSEG00000007330	rrp8	100	63.990	Cynoglossus_semilaevis
ENSHBUG00000017131	rrp8	100	57.979	ENSCVAG00000012032	rrp8	100	56.424	Cyprinodon_variegatus
ENSHBUG00000017131	rrp8	100	47.387	ENSDARG00000071652	rrp8	80	73.874	Danio_rerio
ENSHBUG00000017131	rrp8	70	56.198	ENSETEG00000008877	RRP8	53	56.198	Echinops_telfairi
ENSHBUG00000017131	rrp8	73	38.532	ENSEBUG00000002584	rrp8	73	38.584	Eptatretus_burgeri
ENSHBUG00000017131	rrp8	73	55.416	ENSGMOG00000007188	rrp8	97	56.171	Gadus_morhua
ENSHBUG00000017131	rrp8	87	53.878	ENSGAFG00000012331	rrp8	100	53.878	Gambusia_affinis
ENSHBUG00000017131	rrp8	73	64.615	ENSGACG00000011343	rrp8	95	64.872	Gasterosteus_aculeatus
ENSHBUG00000017131	rrp8	100	51.075	ENSHCOG00000001293	rrp8	96	51.776	Hippocampus_comes
ENSHBUG00000017131	rrp8	100	46.112	ENSIPUG00000017733	rrp8	98	46.481	Ictalurus_punctatus
ENSHBUG00000017131	rrp8	100	62.278	ENSKMAG00000009229	rrp8	100	61.728	Kryptolebias_marmoratus
ENSHBUG00000017131	rrp8	68	64.644	ENSLBEG00000019937	rrp8	100	65.296	Labrus_bergylta
ENSHBUG00000017131	rrp8	100	48.440	ENSLOCG00000009591	rrp8	94	48.627	Lepisosteus_oculatus
ENSHBUG00000017131	rrp8	72	57.025	ENSLAFG00000000112	RRP8	53	57.025	Loxodonta_africana
ENSHBUG00000017131	rrp8	100	63.176	ENSMAMG00000009679	rrp8	100	63.748	Mastacembelus_armatus
ENSHBUG00000017131	rrp8	100	98.510	ENSMZEG00005008926	rrp8	100	98.510	Maylandia_zebra
ENSHBUG00000017131	rrp8	93	61.523	ENSMMOG00000015709	rrp8	99	62.330	Mola_mola
ENSHBUG00000017131	rrp8	100	64.261	ENSMALG00000015984	rrp8	98	63.243	Monopterus_albus
ENSHBUG00000017131	rrp8	74	94.074	ENSNBRG00000023416	rrp8	100	94.568	Neolamprologus_brichardi
ENSHBUG00000017131	rrp8	55	56.790	ENSNLEG00000017445	RRP8	63	56.790	Nomascus_leucogenys
ENSHBUG00000017131	rrp8	73	96.692	ENSONIG00000016861	rrp8	96	96.692	Oreochromis_niloticus
ENSHBUG00000017131	rrp8	100	61.854	ENSORLG00000004175	rrp8	99	62.210	Oryzias_latipes
ENSHBUG00000017131	rrp8	100	61.141	ENSORLG00020011413	rrp8	99	62.389	Oryzias_latipes_hni
ENSHBUG00000017131	rrp8	100	61.497	ENSORLG00015015410	rrp8	99	61.854	Oryzias_latipes_hsok
ENSHBUG00000017131	rrp8	100	59.043	ENSOMEG00000003161	rrp8	100	59.717	Oryzias_melastigma
ENSHBUG00000017131	rrp8	100	46.060	ENSPKIG00000024217	rrp8	95	46.950	Paramormyrops_kingsleyae
ENSHBUG00000017131	rrp8	100	56.708	ENSPFOG00000007308	rrp8	100	56.071	Poecilia_formosa
ENSHBUG00000017131	rrp8	100	57.168	ENSPLAG00000011349	rrp8	100	56.351	Poecilia_latipinna
ENSHBUG00000017131	rrp8	100	57.066	ENSPMEG00000009888	rrp8	100	56.429	Poecilia_mexicana
ENSHBUG00000017131	rrp8	87	52.834	ENSPREG00000008450	rrp8	100	52.218	Poecilia_reticulata
ENSHBUG00000017131	rrp8	55	57.202	ENSPPYG00000003538	RRP8	53	57.202	Pongo_abelii
ENSHBUG00000017131	rrp8	100	97.765	ENSPNYG00000002878	rrp8	100	97.765	Pundamilia_nyererei
ENSHBUG00000017131	rrp8	100	46.667	ENSPNAG00000024779	rrp8	95	48.302	Pygocentrus_nattereri
ENSHBUG00000017131	rrp8	100	46.597	ENSSFOG00015003917	rrp8	94	48.327	Scleropages_formosus
ENSHBUG00000017131	rrp8	100	65.225	ENSSMAG00000004859	rrp8	100	65.099	Scophthalmus_maximus
ENSHBUG00000017131	rrp8	100	67.422	ENSSDUG00000010477	rrp8	100	67.016	Seriola_dumerili
ENSHBUG00000017131	rrp8	100	65.841	ENSSLDG00000000521	rrp8	100	66.018	Seriola_lalandi_dorsalis
ENSHBUG00000017131	rrp8	68	68.031	ENSSPAG00000006664	rrp8	100	68.579	Stegastes_partitus
ENSHBUG00000017131	rrp8	100	60.289	ENSTRUG00000021812	rrp8	95	61.480	Takifugu_rubripes
ENSHBUG00000017131	rrp8	70	61.053	ENSXCOG00000006156	rrp8	100	61.053	Xiphophorus_couchianus
ENSHBUG00000017131	rrp8	100	56.434	ENSXMAG00000005011	rrp8	100	57.248	Xiphophorus_maculatus