EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000017151 (Gene tree)
Gene ID: 102293562
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valine--tRNA ligase-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 17035 bases
Position: chrJH425390.1:592150-609184
Accession: 102293562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015206	tRNA-synt_1g	PF09334.11	5e-13	1	1
ENSHBUP00000015206	Anticodon_1	PF08264.13	3.4e-36	1	1
ENSHBUP00000015206	tRNA-synt_1	PF00133.22	5.3e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033692	-	4295	XM_005925170	ENSHBUP00000015206	1321 (aa)	XP_005925232	UPI0003BCBDA5

Gene Model

Click here to download ENSHBUG00000017151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000017151	vars	76	47.070	ENSHBUG00000002448	vars2	94	48.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017151	vars	97	64.569	ENSG00000204394	VARS	99	71.779	Homo_sapiens
ENSHBUG00000017151	vars	92	91.297	ENSAPOG00000020921	vars	97	91.297	Acanthochromis_polyacanthus
ENSHBUG00000017151	vars	92	91.297	ENSAPOG00000020691	vars	97	91.297	Acanthochromis_polyacanthus
ENSHBUG00000017151	vars	97	64.752	ENSAMEG00000006417	VARS	100	64.811	Ailuropoda_melanoleuca
ENSHBUG00000017151	vars	97	93.349	ENSACIG00000013752	vars	100	93.349	Amphilophus_citrinellus
ENSHBUG00000017151	vars	98	91.705	ENSAOCG00000002447	vars	100	91.705	Amphiprion_ocellaris
ENSHBUG00000017151	vars	98	91.628	ENSAPEG00000010638	vars	100	91.628	Amphiprion_percula
ENSHBUG00000017151	vars	97	87.334	ENSATEG00000020219	vars	100	87.334	Anabas_testudineus
ENSHBUG00000017151	vars	87	71.948	ENSACAG00000029133	-	99	71.948	Anolis_carolinensis
ENSHBUG00000017151	vars	97	64.569	ENSANAG00000015453	VARS	100	64.806	Aotus_nancymaae
ENSHBUG00000017151	vars	100	99.621	ENSACLG00000025699	vars	100	99.621	Astatotilapia_calliptera
ENSHBUG00000017151	vars	93	80.245	ENSAMXG00000017716	vars	96	80.245	Astyanax_mexicanus
ENSHBUG00000017151	vars	97	64.957	ENSBTAG00000005631	VARS	100	65.194	Bos_taurus
ENSHBUG00000017151	vars	97	64.413	ENSCJAG00000002604	VARS	100	64.651	Callithrix_jacchus
ENSHBUG00000017151	vars	97	64.491	ENSCAFG00000000636	VARS	100	64.551	Canis_familiaris
ENSHBUG00000017151	vars	91	65.783	ENSCAFG00020020790	VARS	96	65.842	Canis_lupus_dingo
ENSHBUG00000017151	vars	97	65.035	ENSCHIG00000011008	VARS	100	65.271	Capra_hircus
ENSHBUG00000017151	vars	97	64.336	ENSTSYG00000001567	VARS	100	64.574	Carlito_syrichta
ENSHBUG00000017151	vars	87	68.045	ENSCAPG00000013736	VARS	98	67.900	Cavia_aperea
ENSHBUG00000017151	vars	97	64.651	ENSCPOG00000000870	VARS	100	64.369	Cavia_porcellus
ENSHBUG00000017151	vars	97	64.624	ENSCCAG00000035656	VARS	100	64.856	Cebus_capucinus
ENSHBUG00000017151	vars	97	64.729	ENSCATG00000022394	VARS	100	65.039	Cercocebus_atys
ENSHBUG00000017151	vars	89	63.748	ENSCLAG00000009470	VARS	97	63.532	Chinchilla_lanigera
ENSHBUG00000017151	vars	97	64.574	ENSCSAG00000008784	VARS	100	64.884	Chlorocebus_sabaeus
ENSHBUG00000017151	vars	74	74.438	ENSCPBG00000007943	VARS	96	74.438	Chrysemys_picta_bellii
ENSHBUG00000017151	vars	97	64.729	ENSCANG00000033570	VARS	100	65.039	Colobus_angolensis_palliatus
ENSHBUG00000017151	vars	97	64.025	ENSCGRG00001005686	Vars	100	64.341	Cricetulus_griseus_chok1gshd
ENSHBUG00000017151	vars	90	62.038	ENSCGRG00000013352	Vars	78	62.377	Cricetulus_griseus_crigri
ENSHBUG00000017151	vars	97	82.929	ENSCSEG00000019652	vars	100	82.929	Cynoglossus_semilaevis
ENSHBUG00000017151	vars	97	92.006	ENSCVAG00000022398	vars	100	92.006	Cyprinodon_variegatus
ENSHBUG00000017151	vars	97	84.260	ENSDARG00000044575	vars	100	84.260	Danio_rerio
ENSHBUG00000017151	vars	79	70.342	ENSDORG00000016433	Vars	94	70.427	Dipodomys_ordii
ENSHBUG00000017151	vars	66	74.088	ENSETEG00000003824	VARS	76	74.088	Echinops_telfairi
ENSHBUG00000017151	vars	55	65.253	ENSEBUG00000004637	vars	100	65.253	Eptatretus_burgeri
ENSHBUG00000017151	vars	97	65.190	ENSEASG00005015673	VARS	100	65.426	Equus_asinus_asinus
ENSHBUG00000017151	vars	97	64.984	ENSECAG00000014620	VARS	100	65.143	Equus_caballus
ENSHBUG00000017151	vars	69	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSHBUG00000017151	vars	98	83.821	ENSELUG00000006550	vars	99	83.717	Esox_lucius
ENSHBUG00000017151	vars	97	64.802	ENSFCAG00000004510	VARS	100	64.961	Felis_catus
ENSHBUG00000017151	vars	80	69.664	ENSFDAG00000011401	VARS	100	69.299	Fukomys_damarensis
ENSHBUG00000017151	vars	97	90.204	ENSFHEG00000010672	vars	100	90.204	Fundulus_heteroclitus
ENSHBUG00000017151	vars	97	81.698	ENSGMOG00000014908	vars	100	81.698	Gadus_morhua
ENSHBUG00000017151	vars	97	91.301	ENSGAFG00000021630	vars	100	91.301	Gambusia_affinis
ENSHBUG00000017151	vars	90	90.680	ENSGACG00000009601	vars	100	86.307	Gasterosteus_aculeatus
ENSHBUG00000017151	vars	97	64.806	ENSGGOG00000011364	VARS	100	65.116	Gorilla_gorilla
ENSHBUG00000017151	vars	97	64.386	ENSHGLG00000011646	VARS	100	64.386	Heterocephalus_glaber_female
ENSHBUG00000017151	vars	90	60.934	ENSHGLG00100018062	VARS	99	60.855	Heterocephalus_glaber_male
ENSHBUG00000017151	vars	97	85.435	ENSHCOG00000012198	vars	99	85.614	Hippocampus_comes
ENSHBUG00000017151	vars	97	83.203	ENSIPUG00000005218	vars	100	83.281	Ictalurus_punctatus
ENSHBUG00000017151	vars	97	65.035	ENSSTOG00000013112	VARS	100	64.961	Ictidomys_tridecemlineatus
ENSHBUG00000017151	vars	97	64.341	ENSJJAG00000019749	-	100	64.103	Jaculus_jaculus
ENSHBUG00000017151	vars	97	52.771	ENSJJAG00000015343	-	98	54.739	Jaculus_jaculus
ENSHBUG00000017151	vars	97	87.382	ENSKMAG00000009455	vars	100	87.382	Kryptolebias_marmoratus
ENSHBUG00000017151	vars	97	87.576	ENSLBEG00000010341	vars	99	87.576	Labrus_bergylta
ENSHBUG00000017151	vars	91	66.612	ENSLACG00000015232	VARS	99	66.830	Latimeria_chalumnae
ENSHBUG00000017151	vars	97	75.274	ENSLOCG00000004240	vars	100	75.509	Lepisosteus_oculatus
ENSHBUG00000017151	vars	97	64.697	ENSLAFG00000023090	VARS	100	64.697	Loxodonta_africana
ENSHBUG00000017151	vars	97	64.574	ENSMFAG00000001032	VARS	100	64.884	Macaca_fascicularis
ENSHBUG00000017151	vars	97	64.574	ENSMMUG00000006828	VARS	100	64.884	Macaca_mulatta
ENSHBUG00000017151	vars	97	64.574	ENSMNEG00000042072	VARS	100	64.884	Macaca_nemestrina
ENSHBUG00000017151	vars	97	64.651	ENSMLEG00000039307	VARS	100	64.961	Mandrillus_leucophaeus
ENSHBUG00000017151	vars	97	90.831	ENSMAMG00000003949	vars	100	90.831	Mastacembelus_armatus
ENSHBUG00000017151	vars	100	99.621	ENSMZEG00005018327	vars	100	99.621	Maylandia_zebra
ENSHBUG00000017151	vars	97	63.869	ENSMAUG00000006715	Vars	100	64.186	Mesocricetus_auratus
ENSHBUG00000017151	vars	97	64.779	ENSMICG00000003548	VARS	100	64.574	Microcebus_murinus
ENSHBUG00000017151	vars	97	63.219	ENSMOCG00000015404	Vars	100	63.333	Microtus_ochrogaster
ENSHBUG00000017151	vars	97	87.226	ENSMMOG00000015801	vars	100	87.226	Mola_mola
ENSHBUG00000017151	vars	97	65.349	ENSMODG00000015204	-	100	65.271	Monodelphis_domestica
ENSHBUG00000017151	vars	97	90.681	ENSMALG00000022532	vars	99	90.681	Monopterus_albus
ENSHBUG00000017151	vars	97	64.852	MGP_CAROLIEiJ_G0021491	Vars	100	64.961	Mus_caroli
ENSHBUG00000017151	vars	97	64.697	ENSMUSG00000007029	Vars	100	64.806	Mus_musculus
ENSHBUG00000017151	vars	97	64.619	MGP_PahariEiJ_G0020486	Vars	100	64.619	Mus_pahari
ENSHBUG00000017151	vars	97	64.774	MGP_SPRETEiJ_G0022396	Vars	100	64.884	Mus_spretus
ENSHBUG00000017151	vars	97	64.569	ENSMPUG00000010821	VARS	100	64.628	Mustela_putorius_furo
ENSHBUG00000017151	vars	75	67.825	ENSMLUG00000013126	VARS	100	67.723	Myotis_lucifugus
ENSHBUG00000017151	vars	97	64.463	ENSNGAG00000012151	Vars	100	64.546	Nannospalax_galili
ENSHBUG00000017151	vars	97	99.451	ENSNBRG00000020520	vars	100	99.451	Neolamprologus_brichardi
ENSHBUG00000017151	vars	97	64.646	ENSNLEG00000006351	VARS	100	64.884	Nomascus_leucogenys
ENSHBUG00000017151	vars	91	71.944	ENSMEUG00000011378	VARS	100	63.219	Notamacropus_eugenii
ENSHBUG00000017151	vars	97	64.880	ENSOPRG00000003607	VARS	100	65.194	Ochotona_princeps
ENSHBUG00000017151	vars	97	63.686	ENSODEG00000017681	VARS	100	63.608	Octodon_degus
ENSHBUG00000017151	vars	97	97.270	ENSONIG00000013064	vars	100	99.129	Oreochromis_niloticus
ENSHBUG00000017151	vars	75	67.292	ENSOANG00000005400	VARS	98	67.213	Ornithorhynchus_anatinus
ENSHBUG00000017151	vars	97	63.219	ENSOCUG00000022463	VARS	100	62.954	Oryctolagus_cuniculus
ENSHBUG00000017151	vars	97	89.416	ENSORLG00000013063	vars	100	89.572	Oryzias_latipes
ENSHBUG00000017151	vars	97	90.070	ENSORLG00020003504	vars	100	90.149	Oryzias_latipes_hni
ENSHBUG00000017151	vars	97	90.297	ENSORLG00015009001	vars	100	90.297	Oryzias_latipes_hsok
ENSHBUG00000017151	vars	97	90.532	ENSOMEG00000015016	vars	100	90.532	Oryzias_melastigma
ENSHBUG00000017151	vars	97	64.413	ENSOGAG00000007515	VARS	100	64.319	Otolemur_garnettii
ENSHBUG00000017151	vars	97	64.569	ENSPPAG00000034012	VARS	100	64.806	Pan_paniscus
ENSHBUG00000017151	vars	97	64.802	ENSPPRG00000014855	VARS	100	64.961	Panthera_pardus
ENSHBUG00000017151	vars	82	68.928	ENSPTIG00000010462	VARS	94	68.592	Panthera_tigris_altaica
ENSHBUG00000017151	vars	97	64.491	ENSPTRG00000017985	VARS	100	64.729	Pan_troglodytes
ENSHBUG00000017151	vars	97	63.097	ENSPANG00000014565	VARS	100	63.405	Papio_anubis
ENSHBUG00000017151	vars	97	81.556	ENSPKIG00000016304	vars	100	81.556	Paramormyrops_kingsleyae
ENSHBUG00000017151	vars	97	83.621	ENSPMGG00000023909	vars	100	83.621	Periophthalmus_magnuspinnatus
ENSHBUG00000017151	vars	97	64.258	ENSPEMG00000006639	Vars	100	64.574	Peromyscus_maniculatus_bairdii
ENSHBUG00000017151	vars	97	64.884	ENSPCIG00000018553	VARS	100	64.961	Phascolarctos_cinereus
ENSHBUG00000017151	vars	97	91.066	ENSPFOG00000015690	vars	100	91.066	Poecilia_formosa
ENSHBUG00000017151	vars	97	90.909	ENSPLAG00000009590	vars	100	90.909	Poecilia_latipinna
ENSHBUG00000017151	vars	97	90.987	ENSPMEG00000004708	vars	100	90.987	Poecilia_mexicana
ENSHBUG00000017151	vars	92	93.114	ENSPREG00000013264	vars	100	86.207	Poecilia_reticulata
ENSHBUG00000017151	vars	97	63.248	ENSPPYG00000016460	VARS	100	63.080	Pongo_abelii
ENSHBUG00000017151	vars	83	65.897	ENSPCAG00000013565	VARS	86	65.897	Procavia_capensis
ENSHBUG00000017151	vars	97	64.596	ENSPCOG00000010942	VARS	100	64.756	Propithecus_coquereli
ENSHBUG00000017151	vars	97	62.607	ENSPVAG00000012403	VARS	100	62.946	Pteropus_vampyrus
ENSHBUG00000017151	vars	97	99.922	ENSPNYG00000022511	vars	100	99.922	Pundamilia_nyererei
ENSHBUG00000017151	vars	97	83.841	ENSPNAG00000020962	vars	100	84.075	Pygocentrus_nattereri
ENSHBUG00000017151	vars	97	64.569	ENSRNOG00000000867	Vars	100	64.396	Rattus_norvegicus
ENSHBUG00000017151	vars	97	64.651	ENSRBIG00000041669	VARS	100	64.961	Rhinopithecus_bieti
ENSHBUG00000017151	vars	97	64.651	ENSRROG00000045490	VARS	100	64.961	Rhinopithecus_roxellana
ENSHBUG00000017151	vars	97	64.258	ENSSBOG00000035402	VARS	100	64.496	Saimiri_boliviensis_boliviensis
ENSHBUG00000017151	vars	97	64.434	ENSSHAG00000006937	VARS	100	64.543	Sarcophilus_harrisii
ENSHBUG00000017151	vars	97	80.982	ENSSFOG00015014272	vars	100	80.982	Scleropages_formosus
ENSHBUG00000017151	vars	97	89.593	ENSSMAG00000009596	vars	99	89.593	Scophthalmus_maximus
ENSHBUG00000017151	vars	97	92.801	ENSSDUG00000014177	vars	100	92.801	Seriola_dumerili
ENSHBUG00000017151	vars	97	92.567	ENSSLDG00000025316	vars	100	92.567	Seriola_lalandi_dorsalis
ENSHBUG00000017151	vars	97	91.301	ENSSPAG00000017068	vars	100	91.536	Stegastes_partitus
ENSHBUG00000017151	vars	97	64.286	ENSSSCG00000038950	VARS	100	64.446	Sus_scrofa
ENSHBUG00000017151	vars	79	81.411	ENSTRUG00000012307	vars	98	81.292	Takifugu_rubripes
ENSHBUG00000017151	vars	97	86.854	ENSTNIG00000008011	vars	100	86.854	Tetraodon_nigroviridis
ENSHBUG00000017151	vars	97	58.929	ENSTTRG00000014128	VARS	100	58.929	Tursiops_truncatus
ENSHBUG00000017151	vars	97	63.101	ENSUAMG00000010424	VARS	100	63.166	Ursus_americanus
ENSHBUG00000017151	vars	97	59.182	ENSUMAG00000013486	VARS	98	64.253	Ursus_maritimus
ENSHBUG00000017151	vars	97	64.546	ENSVVUG00000021323	VARS	100	64.369	Vulpes_vulpes
ENSHBUG00000017151	vars	97	64.469	ENSXETG00000024076	vars	100	64.424	Xenopus_tropicalis
ENSHBUG00000017151	vars	97	88.715	ENSXCOG00000019172	vars	100	88.715	Xiphophorus_couchianus
ENSHBUG00000017151	vars	97	91.223	ENSXMAG00000010927	vars	100	91.223	Xiphophorus_maculatus