EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000017166 (Gene tree)
Gene ID: 102292629
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5837 bases
Position: chrJH425620.1:504709-510545
Accession: 102292629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000031449	GTP_EFTU_D2	PF03144.25	5.7e-14	1	1
ENSHBUP00000031449	GTP_EFTU_D3	PF03143.17	1.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033707	-	801	XM_014339600	ENSHBUP00000031449	266 (aa)	XP_014195086	-

Gene Model

Click here to download ENSHBUG00000017166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000017166	-	95	83.794	ENSHBUG00000011690	EEF1A1	55	83.794
ENSHBUG00000017166	-	83	31.081	ENSHBUG00000006257	gspt1l	51	31.081
ENSHBUG00000017166	-	95	85.375	ENSHBUG00000017108	-	83	85.375
ENSHBUG00000017166	-	91	67.073	ENSHBUG00000015515	si:dkey-37o8.1	54	67.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017166	-	91	92.149	ENSAPOG00000004714	-	56	92.063	Acanthochromis_polyacanthus
ENSHBUG00000017166	-	65	85.632	ENSAPOG00000004685	-	55	82.323	Acanthochromis_polyacanthus
ENSHBUG00000017166	-	95	96.457	ENSACIG00000001219	-	61	96.457	Amphilophus_citrinellus
ENSHBUG00000017166	-	95	87.747	ENSAOCG00000022039	-	55	87.747	Amphiprion_ocellaris
ENSHBUG00000017166	-	91	92.562	ENSAOCG00000022002	-	61	92.460	Amphiprion_ocellaris
ENSHBUG00000017166	-	95	87.747	ENSAPEG00000016361	-	55	87.747	Amphiprion_percula
ENSHBUG00000017166	-	91	92.181	ENSATEG00000003244	-	53	92.095	Anabas_testudineus
ENSHBUG00000017166	-	95	99.606	ENSACLG00000022560	-	55	99.606	Astatotilapia_calliptera
ENSHBUG00000017166	-	95	79.528	WBGene00001168	eef-1A.1	55	79.528	Caenorhabditis_elegans
ENSHBUG00000017166	-	95	79.528	WBGene00001169	eef-1A.2	59	79.528	Caenorhabditis_elegans
ENSHBUG00000017166	-	95	72.763	ENSCING00000007703	-	55	72.763	Ciona_intestinalis
ENSHBUG00000017166	-	91	78.367	ENSCING00000018894	-	55	78.039	Ciona_intestinalis
ENSHBUG00000017166	-	91	75.304	ENSCING00000005126	-	55	75.097	Ciona_intestinalis
ENSHBUG00000017166	-	94	80.478	ENSCING00000021478	-	55	80.478	Ciona_intestinalis
ENSHBUG00000017166	-	91	76.016	ENSCSAVG00000003196	-	54	75.781	Ciona_savignyi
ENSHBUG00000017166	-	95	81.028	ENSCSAVG00000006357	-	90	83.333	Ciona_savignyi
ENSHBUG00000017166	-	91	79.424	ENSCSAVG00000009663	-	54	79.051	Ciona_savignyi
ENSHBUG00000017166	-	95	79.051	ENSCSEG00000007992	-	61	79.051	Cynoglossus_semilaevis
ENSHBUG00000017166	-	95	79.528	ENSCSEG00000007972	-	61	79.528	Cynoglossus_semilaevis
ENSHBUG00000017166	-	91	91.770	ENSCSEG00000008011	-	55	91.304	Cynoglossus_semilaevis
ENSHBUG00000017166	-	91	93.416	ENSCVAG00000019356	-	55	93.281	Cyprinodon_variegatus
ENSHBUG00000017166	-	91	79.012	FBgn0000557	eEF1alpha2	55	79.447	Drosophila_melanogaster
ENSHBUG00000017166	-	95	80.315	FBgn0284245	eEF1alpha1	55	80.315	Drosophila_melanogaster
ENSHBUG00000017166	-	94	77.600	ENSEBUG00000015814	-	54	77.600	Eptatretus_burgeri
ENSHBUG00000017166	-	91	92.975	ENSFHEG00000015054	-	55	92.857	Fundulus_heteroclitus
ENSHBUG00000017166	-	92	91.057	ENSGAFG00000014646	-	56	91.016	Gambusia_affinis
ENSHBUG00000017166	-	95	90.873	ENSGACG00000002143	-	55	90.873	Gasterosteus_aculeatus
ENSHBUG00000017166	-	91	92.975	ENSGACG00000002182	-	55	92.857	Gasterosteus_aculeatus
ENSHBUG00000017166	-	91	91.736	ENSHCOG00000008468	-	55	91.667	Hippocampus_comes
ENSHBUG00000017166	-	94	80.952	ENSHCOG00000008489	-	55	80.952	Hippocampus_comes
ENSHBUG00000017166	-	94	78.800	ENSLBEG00000002955	-	54	78.800	Labrus_bergylta
ENSHBUG00000017166	-	91	89.712	ENSLBEG00000002759	-	55	89.723	Labrus_bergylta
ENSHBUG00000017166	-	91	93.416	ENSMAMG00000007715	-	55	93.281	Mastacembelus_armatus
ENSHBUG00000017166	-	91	92.149	ENSMMOG00000001165	-	63	92.063	Mola_mola
ENSHBUG00000017166	-	94	80.800	ENSMMOG00000001106	-	54	80.800	Mola_mola
ENSHBUG00000017166	-	94	70.683	ENSMMOG00000018160	-	63	71.255	Mola_mola
ENSHBUG00000017166	-	53	89.286	ENSMALG00000012689	-	73	89.286	Monopterus_albus
ENSHBUG00000017166	-	95	100.000	ENSNBRG00000017346	-	58	100.000	Neolamprologus_brichardi
ENSHBUG00000017166	-	91	92.593	ENSORLG00000007614	eef1a	55	92.490	Oryzias_latipes
ENSHBUG00000017166	-	95	89.370	ENSORLG00015002397	-	55	92.857	Oryzias_latipes_hsok
ENSHBUG00000017166	-	91	93.827	ENSOMEG00000018226	-	55	93.676	Oryzias_melastigma
ENSHBUG00000017166	-	77	49.756	ENSPMGG00000022427	-	50	49.756	Periophthalmus_magnuspinnatus
ENSHBUG00000017166	-	91	91.358	ENSPMGG00000023911	-	55	91.270	Periophthalmus_magnuspinnatus
ENSHBUG00000017166	-	92	91.463	ENSPFOG00000003924	-	62	91.406	Poecilia_formosa
ENSHBUG00000017166	-	92	91.463	ENSPLAG00000004316	-	56	91.406	Poecilia_latipinna
ENSHBUG00000017166	-	92	91.057	ENSPMEG00000001010	-	56	91.016	Poecilia_mexicana
ENSHBUG00000017166	-	96	87.938	ENSPREG00000008243	-	56	90.625	Poecilia_reticulata
ENSHBUG00000017166	-	95	99.606	ENSPNYG00000007263	-	55	99.606	Pundamilia_nyererei
ENSHBUG00000017166	-	87	81.466	YBR118W	TEF2	55	79.200	Saccharomyces_cerevisiae
ENSHBUG00000017166	-	87	81.466	YPR080W	TEF1	55	79.200	Saccharomyces_cerevisiae
ENSHBUG00000017166	-	91	75.000	ENSSMAG00000018469	-	57	75.547	Scophthalmus_maximus
ENSHBUG00000017166	-	91	90.909	ENSSMAG00000016277	-	99	90.873	Scophthalmus_maximus
ENSHBUG00000017166	-	91	91.736	ENSSDUG00000008198	-	55	91.667	Seriola_dumerili
ENSHBUG00000017166	-	91	89.300	ENSSPAG00000001710	-	55	89.328	Stegastes_partitus
ENSHBUG00000017166	-	94	82.400	ENSTRUG00000005066	-	54	82.400	Takifugu_rubripes
ENSHBUG00000017166	-	91	92.593	ENSTRUG00000005727	ef-1a	56	91.797	Takifugu_rubripes
ENSHBUG00000017166	-	94	79.200	ENSTNIG00000002617	-	52	79.200	Tetraodon_nigroviridis
ENSHBUG00000017166	-	91	93.827	ENSTNIG00000002619	-	55	93.676	Tetraodon_nigroviridis
ENSHBUG00000017166	-	92	91.463	ENSXCOG00000001542	-	58	91.406	Xiphophorus_couchianus