EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000017337 (Gene tree)
Gene ID: 102310604
Gene Symbol: -
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 10199 bases
Position: chrJH425642.1:28706-38904
Accession: 102310604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015435	RRM_1	PF00076.22	9.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000023687	-	4314	XM_005941760	ENSHBUP00000015435	278 (aa)	XP_005941822	-

Gene Model

Click here to download ENSHBUG00000017337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000017337	-	82	66.087	ENSHBUG00000002494	RNPS1	82	63.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017337	-	84	72.199	ENSG00000205937	RNPS1	66	84.706	Homo_sapiens
ENSHBUG00000017337	-	83	63.793	ENSAPOG00000017310	RNPS1	74	63.636	Acanthochromis_polyacanthus
ENSHBUG00000017337	-	84	72.199	ENSAMEG00000017861	RNPS1	79	64.730	Ailuropoda_melanoleuca
ENSHBUG00000017337	-	93	97.287	ENSACIG00000020701	RNPS1	99	97.287	Amphilophus_citrinellus
ENSHBUG00000017337	-	82	89.083	ENSAPEG00000019263	-	79	78.166	Amphiprion_percula
ENSHBUG00000017337	-	82	66.379	ENSATEG00000024267	RNPS1	82	64.935	Anabas_testudineus
ENSHBUG00000017337	-	77	67.442	ENSATEG00000000835	RNPS1	91	68.692	Anabas_testudineus
ENSHBUG00000017337	-	84	53.333	ENSAPLG00000006231	RNPS1	53	77.391	Anas_platyrhynchos
ENSHBUG00000017337	-	73	66.825	ENSACAG00000004088	RNPS1	85	58.294	Anolis_carolinensis
ENSHBUG00000017337	-	84	71.784	ENSANAG00000028802	RNPS1	79	64.315	Aotus_nancymaae
ENSHBUG00000017337	-	82	66.522	ENSACLG00000025942	RNPS1	82	63.755	Astatotilapia_calliptera
ENSHBUG00000017337	-	88	100.000	ENSACLG00000021537	-	92	100.000	Astatotilapia_calliptera
ENSHBUG00000017337	-	83	76.824	ENSAMXG00000006330	-	81	73.500	Astyanax_mexicanus
ENSHBUG00000017337	-	76	71.429	ENSBTAG00000009969	RNPS1	77	62.844	Bos_taurus
ENSHBUG00000017337	-	84	72.199	ENSCJAG00000014969	RNPS1	90	59.722	Callithrix_jacchus
ENSHBUG00000017337	-	84	72.199	ENSCAFG00000019397	RNPS1	79	64.730	Canis_familiaris
ENSHBUG00000017337	-	84	72.199	ENSCAFG00020026159	RNPS1	87	61.084	Canis_lupus_dingo
ENSHBUG00000017337	-	71	69.608	ENSCHIG00000014621	-	69	60.488	Capra_hircus
ENSHBUG00000017337	-	76	69.406	ENSTSYG00000031848	-	90	60.633	Carlito_syrichta
ENSHBUG00000017337	-	84	72.199	ENSTSYG00000001629	RNPS1	79	64.730	Carlito_syrichta
ENSHBUG00000017337	-	84	71.784	ENSCAPG00000007731	RNPS1	79	64.315	Cavia_aperea
ENSHBUG00000017337	-	84	71.784	ENSCPOG00000002066	RNPS1	79	64.315	Cavia_porcellus
ENSHBUG00000017337	-	84	71.784	ENSCCAG00000034480	RNPS1	79	64.315	Cebus_capucinus
ENSHBUG00000017337	-	95	67.407	ENSCATG00000042361	-	56	77.391	Cercocebus_atys
ENSHBUG00000017337	-	84	72.199	ENSCATG00000013756	RNPS1	89	59.361	Cercocebus_atys
ENSHBUG00000017337	-	84	72.199	ENSCLAG00000015546	RNPS1	85	64.583	Chinchilla_lanigera
ENSHBUG00000017337	-	96	72.527	ENSCSAG00000005219	-	80	64.167	Chlorocebus_sabaeus
ENSHBUG00000017337	-	84	72.199	ENSCANG00000041307	RNPS1	79	64.730	Colobus_angolensis_palliatus
ENSHBUG00000017337	-	84	72.199	ENSCGRG00001020431	Rnps1	79	64.730	Cricetulus_griseus_chok1gshd
ENSHBUG00000017337	-	76	71.233	ENSCGRG00000014021	Rnps1	77	62.844	Cricetulus_griseus_crigri
ENSHBUG00000017337	-	82	72.961	ENSCSEG00000015997	RNPS1	81	62.500	Cynoglossus_semilaevis
ENSHBUG00000017337	-	83	85.714	ENSCSEG00000000402	RNPS1	77	77.489	Cynoglossus_semilaevis
ENSHBUG00000017337	-	77	71.429	ENSCVAG00000010868	RNPS1	76	66.667	Cyprinodon_variegatus
ENSHBUG00000017337	-	84	72.199	ENSDNOG00000016081	RNPS1	79	64.730	Dasypus_novemcinctus
ENSHBUG00000017337	-	84	71.784	ENSDORG00000001755	Rnps1	79	64.315	Dipodomys_ordii
ENSHBUG00000017337	-	84	72.199	ENSEASG00005004862	RNPS1	79	64.730	Equus_asinus_asinus
ENSHBUG00000017337	-	74	68.075	ENSECAG00000023288	RNPS1	77	59.624	Equus_caballus
ENSHBUG00000017337	-	84	71.784	ENSFCAG00000007690	RNPS1	79	64.730	Felis_catus
ENSHBUG00000017337	-	84	71.784	ENSFDAG00000003386	RNPS1	79	64.315	Fukomys_damarensis
ENSHBUG00000017337	-	77	66.359	ENSFHEG00000011705	RNPS1	75	63.380	Fundulus_heteroclitus
ENSHBUG00000017337	-	77	68.056	ENSGAFG00000005457	RNPS1	75	64.319	Gambusia_affinis
ENSHBUG00000017337	-	84	72.199	ENSGGOG00000014275	RNPS1	86	61.165	Gorilla_gorilla
ENSHBUG00000017337	-	72	69.082	ENSGGOG00000026421	-	79	59.903	Gorilla_gorilla
ENSHBUG00000017337	-	82	66.250	ENSHGLG00000006292	-	85	62.844	Heterocephalus_glaber_female
ENSHBUG00000017337	-	84	72.199	ENSHGLG00000013957	RNPS1	79	64.730	Heterocephalus_glaber_female
ENSHBUG00000017337	-	84	72.199	ENSHGLG00100003539	RNPS1	79	64.730	Heterocephalus_glaber_male
ENSHBUG00000017337	-	82	62.288	ENSIPUG00000011746	rnps1	91	62.288	Ictalurus_punctatus
ENSHBUG00000017337	-	84	72.199	ENSJJAG00000015576	-	79	64.730	Jaculus_jaculus
ENSHBUG00000017337	-	82	72.294	ENSKMAG00000009135	RNPS1	82	67.965	Kryptolebias_marmoratus
ENSHBUG00000017337	-	84	72.199	ENSMFAG00000042142	RNPS1	79	64.730	Macaca_fascicularis
ENSHBUG00000017337	-	71	69.951	ENSMMUG00000019238	-	79	61.084	Macaca_mulatta
ENSHBUG00000017337	-	84	72.199	ENSMLEG00000036928	RNPS1	79	64.730	Mandrillus_leucophaeus
ENSHBUG00000017337	-	82	92.105	ENSMAMG00000021148	-	81	92.105	Mastacembelus_armatus
ENSHBUG00000017337	-	82	65.948	ENSMAMG00000021609	-	82	63.478	Mastacembelus_armatus
ENSHBUG00000017337	-	99	100.000	ENSMZEG00005006256	-	99	100.000	Maylandia_zebra
ENSHBUG00000017337	-	82	66.522	ENSMZEG00005012742	RNPS1	82	63.755	Maylandia_zebra
ENSHBUG00000017337	-	76	68.950	ENSMGAG00000010042	RNPS1	90	60.731	Meleagris_gallopavo
ENSHBUG00000017337	-	84	71.784	ENSMICG00000031543	RNPS1	79	64.315	Microcebus_murinus
ENSHBUG00000017337	-	84	72.199	ENSMOCG00000003429	Rnps1	79	64.730	Microtus_ochrogaster
ENSHBUG00000017337	-	85	79.412	ENSMMOG00000004680	-	77	79.263	Mola_mola
ENSHBUG00000017337	-	76	74.762	ENSMMOG00000010863	RNPS1	76	74.762	Mola_mola
ENSHBUG00000017337	-	84	71.901	ENSMODG00000015891	RNPS1	79	71.074	Monodelphis_domestica
ENSHBUG00000017337	-	84	72.199	ENSMUSG00000034681	Rnps1	79	64.730	Mus_musculus
ENSHBUG00000017337	-	84	72.199	MGP_PahariEiJ_G0023498	Rnps1	79	64.730	Mus_pahari
ENSHBUG00000017337	-	84	72.199	MGP_SPRETEiJ_G0022092	Rnps1	79	64.730	Mus_spretus
ENSHBUG00000017337	-	84	72.199	ENSMLUG00000016808	RNPS1	79	64.730	Myotis_lucifugus
ENSHBUG00000017337	-	84	72.199	ENSNGAG00000023702	Rnps1	79	64.730	Nannospalax_galili
ENSHBUG00000017337	-	75	75.120	ENSNBRG00000023437	RNPS1	75	75.120	Neolamprologus_brichardi
ENSHBUG00000017337	-	87	100.000	ENSNBRG00000014540	-	90	100.000	Neolamprologus_brichardi
ENSHBUG00000017337	-	87	70.800	ENSNLEG00000009243	RNPS1	87	62.385	Nomascus_leucogenys
ENSHBUG00000017337	-	84	72.614	ENSMEUG00000008882	RNPS1	79	65.145	Notamacropus_eugenii
ENSHBUG00000017337	-	84	71.369	ENSOPRG00000016422	RNPS1	79	63.900	Ochotona_princeps
ENSHBUG00000017337	-	99	99.273	ENSONIG00000019627	-	99	99.273	Oreochromis_niloticus
ENSHBUG00000017337	-	82	68.421	ENSORLG00000008033	RNPS1	82	68.421	Oryzias_latipes
ENSHBUG00000017337	-	82	69.432	ENSORLG00020020207	RNPS1	82	69.432	Oryzias_latipes_hni
ENSHBUG00000017337	-	82	68.996	ENSORLG00015000305	-	82	68.996	Oryzias_latipes_hsok
ENSHBUG00000017337	-	84	72.199	ENSOARG00000018056	-	67	64.730	Ovis_aries
ENSHBUG00000017337	-	72	69.417	ENSPPAG00000037836	-	86	60.680	Pan_paniscus
ENSHBUG00000017337	-	87	68.548	ENSPPAG00000011845	RNPS1	52	73.913	Pan_paniscus
ENSHBUG00000017337	-	84	71.784	ENSPPRG00000011255	RNPS1	79	64.730	Panthera_pardus
ENSHBUG00000017337	-	54	69.536	ENSPTIG00000015643	RNPS1	61	80.870	Panthera_tigris_altaica
ENSHBUG00000017337	-	72	69.082	ENSPTRG00000046326	-	80	60.386	Pan_troglodytes
ENSHBUG00000017337	-	84	71.784	ENSPTRG00000031310	RNPS1	79	64.315	Pan_troglodytes
ENSHBUG00000017337	-	84	72.199	ENSPANG00000015748	RNPS1	79	64.730	Papio_anubis
ENSHBUG00000017337	-	84	70.124	ENSPSIG00000006048	RNPS1	78	62.656	Pelodiscus_sinensis
ENSHBUG00000017337	-	84	72.199	ENSPEMG00000012797	Rnps1	79	64.730	Peromyscus_maniculatus_bairdii
ENSHBUG00000017337	-	54	70.861	ENSPCIG00000016114	-	56	79.130	Phascolarctos_cinereus
ENSHBUG00000017337	-	84	72.614	ENSPCIG00000025012	RNPS1	79	65.145	Phascolarctos_cinereus
ENSHBUG00000017337	-	77	68.981	ENSPFOG00000009978	RNPS1	75	65.258	Poecilia_formosa
ENSHBUG00000017337	-	77	68.981	ENSPLAG00000009343	RNPS1	75	65.258	Poecilia_latipinna
ENSHBUG00000017337	-	77	69.124	ENSPMEG00000008552	RNPS1	75	65.258	Poecilia_mexicana
ENSHBUG00000017337	-	77	68.981	ENSPREG00000001843	RNPS1	75	65.258	Poecilia_reticulata
ENSHBUG00000017337	-	84	70.539	ENSPCAG00000004514	RNPS1	79	63.071	Procavia_capensis
ENSHBUG00000017337	-	84	71.784	ENSPCOG00000005478	RNPS1	79	64.315	Propithecus_coquereli
ENSHBUG00000017337	-	84	72.199	ENSPVAG00000005105	RNPS1	79	64.730	Pteropus_vampyrus
ENSHBUG00000017337	-	82	66.522	ENSPNYG00000000585	RNPS1	82	63.755	Pundamilia_nyererei
ENSHBUG00000017337	-	82	63.291	ENSPNAG00000017784	-	83	63.291	Pygocentrus_nattereri
ENSHBUG00000017337	-	84	71.784	ENSRNOG00000008703	Rnps1	79	64.315	Rattus_norvegicus
ENSHBUG00000017337	-	84	72.083	ENSRBIG00000038965	-	88	64.730	Rhinopithecus_bieti
ENSHBUG00000017337	-	84	72.199	ENSRROG00000041252	RNPS1	85	64.583	Rhinopithecus_roxellana
ENSHBUG00000017337	-	84	72.199	ENSSBOG00000027927	RNPS1	79	64.730	Saimiri_boliviensis_boliviensis
ENSHBUG00000017337	-	84	72.614	ENSSHAG00000016951	RNPS1	79	65.145	Sarcophilus_harrisii
ENSHBUG00000017337	-	82	78.112	ENSSFOG00015019341	-	74	67.660	Scleropages_formosus
ENSHBUG00000017337	-	82	65.517	ENSSDUG00000011453	RNPS1	82	63.043	Seriola_dumerili
ENSHBUG00000017337	-	76	76.777	ENSSPAG00000005411	-	81	76.777	Stegastes_partitus
ENSHBUG00000017337	-	84	71.784	ENSSSCG00000008048	RNPS1	79	64.315	Sus_scrofa
ENSHBUG00000017337	-	82	65.106	ENSTNIG00000009753	RNPS1	81	60.515	Tetraodon_nigroviridis
ENSHBUG00000017337	-	87	72.800	ENSTBEG00000009098	RNPS1	88	64.730	Tupaia_belangeri
ENSHBUG00000017337	-	84	72.199	ENSTTRG00000008220	RNPS1	79	64.730	Tursiops_truncatus
ENSHBUG00000017337	-	84	72.199	ENSUAMG00000004462	RNPS1	88	64.730	Ursus_americanus
ENSHBUG00000017337	-	84	72.199	ENSUMAG00000022327	RNPS1	79	64.730	Ursus_maritimus
ENSHBUG00000017337	-	84	72.199	ENSVVUG00000009244	RNPS1	79	64.730	Vulpes_vulpes
ENSHBUG00000017337	-	79	68.261	ENSXETG00000024439	rnps1	71	62.557	Xenopus_tropicalis
ENSHBUG00000017337	-	82	70.130	ENSXMAG00000004827	RNPS1	82	66.234	Xiphophorus_maculatus