EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017349 (Gene tree)
Gene ID: 102302614
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 11186 bases
Position: chrJH425769.1:99355-110540
Accession: 102302614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015334	DUF382	PF04037.13	2.1e-58	1	1
ENSHBUP00000015309	DUF382	PF04037.13	2.1e-58	1	1
ENSHBUP00000031509	DUF382	PF04037.13	2.1e-58	1	1
ENSHBUP00000015334	SAP	PF02037.27	8.1e-09	1	1
ENSHBUP00000031509	SAP	PF02037.27	8.5e-09	1	1
ENSHBUP00000015309	SAP	PF02037.27	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033746	-	3214	XM_005945290	ENSHBUP00000015334	843 (aa)	XP_005945352	UPI0003BD78B8
ENSHBUT00000023568	-	3262	XM_005945289	ENSHBUP00000031509	859 (aa)	XP_005945351	UPI0003BCCED2
ENSHBUT00000023526	-	2580	-	ENSHBUP00000015309	859 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000017349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017349	sf3b2	87	74.708	ENSG00000087365	SF3B2	99	90.536	Homo_sapiens
ENSHBUG00000017349	sf3b2	97	90.566	ENSAPOG00000001974	sf3b2	96	90.629	Acanthochromis_polyacanthus
ENSHBUG00000017349	sf3b2	87	74.641	ENSAMEG00000017206	SF3B2	85	73.609	Ailuropoda_melanoleuca
ENSHBUG00000017349	sf3b2	100	88.901	ENSACIG00000000624	sf3b2	100	88.562	Amphilophus_citrinellus
ENSHBUG00000017349	sf3b2	100	87.126	ENSAOCG00000009207	sf3b2	100	89.323	Amphiprion_ocellaris
ENSHBUG00000017349	sf3b2	100	89.782	ENSAPEG00000002762	sf3b2	97	89.667	Amphiprion_percula
ENSHBUG00000017349	sf3b2	97	57.063	ENSACAG00000008615	SF3B2	85	60.131	Anolis_carolinensis
ENSHBUG00000017349	sf3b2	87	74.708	ENSANAG00000029120	SF3B2	86	73.161	Aotus_nancymaae
ENSHBUG00000017349	sf3b2	100	99.534	ENSACLG00000014771	sf3b2	100	99.534	Astatotilapia_calliptera
ENSHBUG00000017349	sf3b2	100	73.778	ENSAMXG00000007929	sf3b2	94	82.520	Astyanax_mexicanus
ENSHBUG00000017349	sf3b2	87	75.000	ENSBTAG00000002778	SF3B2	85	73.834	Bos_taurus
ENSHBUG00000017349	sf3b2	65	48.084	WBGene00021004	sftb-2	97	47.716	Caenorhabditis_elegans
ENSHBUG00000017349	sf3b2	87	74.838	ENSCJAG00000001656	SF3B2	86	73.290	Callithrix_jacchus
ENSHBUG00000017349	sf3b2	87	74.607	ENSCAFG00000013033	SF3B2	85	73.575	Canis_familiaris
ENSHBUG00000017349	sf3b2	87	74.607	ENSCAFG00020015382	SF3B2	85	73.575	Canis_lupus_dingo
ENSHBUG00000017349	sf3b2	87	74.869	ENSCHIG00000011211	SF3B2	85	73.834	Capra_hircus
ENSHBUG00000017349	sf3b2	97	68.828	ENSTSYG00000000959	SF3B2	97	67.995	Carlito_syrichta
ENSHBUG00000017349	sf3b2	50	61.628	ENSCAPG00000006065	SF3B2	68	89.831	Cavia_aperea
ENSHBUG00000017349	sf3b2	77	71.095	ENSCPOG00000008294	SF3B2	97	63.578	Cavia_porcellus
ENSHBUG00000017349	sf3b2	87	74.838	ENSCCAG00000035256	SF3B2	86	73.290	Cebus_capucinus
ENSHBUG00000017349	sf3b2	87	74.708	ENSCATG00000042240	SF3B2	88	73.161	Cercocebus_atys
ENSHBUG00000017349	sf3b2	87	73.595	ENSCLAG00000016852	SF3B2	86	71.742	Chinchilla_lanigera
ENSHBUG00000017349	sf3b2	87	74.708	ENSCSAG00000008121	SF3B2	86	73.161	Chlorocebus_sabaeus
ENSHBUG00000017349	sf3b2	89	88.265	ENSCHOG00000001476	SF3B2	78	80.612	Choloepus_hoffmanni
ENSHBUG00000017349	sf3b2	98	66.330	ENSCPBG00000022465	SF3B2	87	80.878	Chrysemys_picta_bellii
ENSHBUG00000017349	sf3b2	74	59.750	ENSCING00000005665	-	100	59.380	Ciona_intestinalis
ENSHBUG00000017349	sf3b2	74	60.737	ENSCSAVG00000002029	-	99	59.742	Ciona_savignyi
ENSHBUG00000017349	sf3b2	87	74.708	ENSCANG00000039680	SF3B2	86	73.161	Colobus_angolensis_palliatus
ENSHBUG00000017349	sf3b2	97	68.445	ENSCGRG00001015741	Sf3b2	86	72.000	Cricetulus_griseus_chok1gshd
ENSHBUG00000017349	sf3b2	97	68.445	ENSCGRG00000018110	Sf3b2	88	72.000	Cricetulus_griseus_crigri
ENSHBUG00000017349	sf3b2	88	80.485	ENSCSEG00000000230	sf3b2	100	75.793	Cynoglossus_semilaevis
ENSHBUG00000017349	sf3b2	100	84.713	ENSCVAG00000003357	sf3b2	100	83.908	Cyprinodon_variegatus
ENSHBUG00000017349	sf3b2	97	72.318	ENSDARG00000018049	sf3b2	99	73.231	Danio_rerio
ENSHBUG00000017349	sf3b2	97	69.231	ENSDNOG00000009484	SF3B2	94	73.575	Dasypus_novemcinctus
ENSHBUG00000017349	sf3b2	85	73.896	ENSDORG00000002495	Sf3b2	85	71.871	Dipodomys_ordii
ENSHBUG00000017349	sf3b2	71	81.567	ENSETEG00000020284	SF3B2	70	81.352	Echinops_telfairi
ENSHBUG00000017349	sf3b2	99	55.221	ENSEBUG00000013703	sf3b2	99	56.573	Eptatretus_burgeri
ENSHBUG00000017349	sf3b2	87	74.510	ENSEASG00005004508	SF3B2	85	73.196	Equus_asinus_asinus
ENSHBUG00000017349	sf3b2	87	74.510	ENSECAG00000024461	SF3B2	85	73.196	Equus_caballus
ENSHBUG00000017349	sf3b2	58	85.833	ENSEEUG00000014278	-	58	85.833	Erinaceus_europaeus
ENSHBUG00000017349	sf3b2	100	78.564	ENSELUG00000005586	sf3b2	100	78.672	Esox_lucius
ENSHBUG00000017349	sf3b2	87	74.738	ENSFCAG00000013289	SF3B2	97	66.705	Felis_catus
ENSHBUG00000017349	sf3b2	79	66.964	ENSFALG00000014653	SF3B2	93	65.731	Ficedula_albicollis
ENSHBUG00000017349	sf3b2	97	68.284	ENSFDAG00000019806	SF3B2	97	65.979	Fukomys_damarensis
ENSHBUG00000017349	sf3b2	100	83.827	ENSFHEG00000020968	sf3b2	100	83.371	Fundulus_heteroclitus
ENSHBUG00000017349	sf3b2	78	87.082	ENSGMOG00000012131	sf3b2	100	86.667	Gadus_morhua
ENSHBUG00000017349	sf3b2	100	83.886	ENSGAFG00000001675	sf3b2	100	83.771	Gambusia_affinis
ENSHBUG00000017349	sf3b2	78	88.754	ENSGACG00000019012	sf3b2	100	88.754	Gasterosteus_aculeatus
ENSHBUG00000017349	sf3b2	98	68.259	ENSGAGG00000023916	SF3B2	86	74.346	Gopherus_agassizii
ENSHBUG00000017349	sf3b2	79	90.141	ENSGGOG00000028448	SF3B2	84	90.141	Gorilla_gorilla
ENSHBUG00000017349	sf3b2	97	68.088	ENSHGLG00000010807	SF3B2	86	71.742	Heterocephalus_glaber_female
ENSHBUG00000017349	sf3b2	97	68.701	ENSHGLG00100006361	SF3B2	86	73.032	Heterocephalus_glaber_male
ENSHBUG00000017349	sf3b2	100	80.023	ENSHCOG00000016203	sf3b2	100	79.673	Hippocampus_comes
ENSHBUG00000017349	sf3b2	100	72.958	ENSIPUG00000009383	sf3b2	100	72.737	Ictalurus_punctatus
ENSHBUG00000017349	sf3b2	97	68.588	ENSSTOG00000028892	SF3B2	86	73.032	Ictidomys_tridecemlineatus
ENSHBUG00000017349	sf3b2	97	67.775	ENSJJAG00000018193	Sf3b2	86	71.630	Jaculus_jaculus
ENSHBUG00000017349	sf3b2	100	83.201	ENSKMAG00000020181	sf3b2	100	83.087	Kryptolebias_marmoratus
ENSHBUG00000017349	sf3b2	100	88.584	ENSLBEG00000027739	sf3b2	100	88.699	Labrus_bergylta
ENSHBUG00000017349	sf3b2	84	80.408	ENSLACG00000010429	SF3B2	100	65.934	Latimeria_chalumnae
ENSHBUG00000017349	sf3b2	85	74.000	ENSLAFG00000002128	SF3B2	97	66.744	Loxodonta_africana
ENSHBUG00000017349	sf3b2	87	74.611	ENSMFAG00000003064	SF3B2	88	73.067	Macaca_fascicularis
ENSHBUG00000017349	sf3b2	87	70.665	ENSMMUG00000011743	SF3B2	86	69.301	Macaca_mulatta
ENSHBUG00000017349	sf3b2	87	74.708	ENSMNEG00000034437	SF3B2	88	73.161	Macaca_nemestrina
ENSHBUG00000017349	sf3b2	87	74.708	ENSMLEG00000029373	SF3B2	88	73.161	Mandrillus_leucophaeus
ENSHBUG00000017349	sf3b2	100	88.952	ENSMAMG00000014103	sf3b2	100	89.522	Mastacembelus_armatus
ENSHBUG00000017349	sf3b2	100	99.534	ENSMZEG00005020789	sf3b2	100	99.534	Maylandia_zebra
ENSHBUG00000017349	sf3b2	97	67.833	ENSMICG00000016942	-	97	67.371	Microcebus_murinus
ENSHBUG00000017349	sf3b2	97	68.927	ENSMICG00000008565	-	86	73.325	Microcebus_murinus
ENSHBUG00000017349	sf3b2	97	67.684	ENSMOCG00000003136	Sf3b2	86	72.000	Microtus_ochrogaster
ENSHBUG00000017349	sf3b2	100	83.218	ENSMMOG00000012928	sf3b2	100	83.333	Mola_mola
ENSHBUG00000017349	sf3b2	87	73.788	ENSMODG00000008490	-	93	72.938	Monodelphis_domestica
ENSHBUG00000017349	sf3b2	74	74.525	ENSMODG00000025020	-	99	73.259	Monodelphis_domestica
ENSHBUG00000017349	sf3b2	100	83.562	ENSMALG00000015137	sf3b2	100	83.904	Monopterus_albus
ENSHBUG00000017349	sf3b2	85	74.163	MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.742	Mus_caroli
ENSHBUG00000017349	sf3b2	97	67.972	ENSMUSG00000024853	Sf3b2	86	71.871	Mus_musculus
ENSHBUG00000017349	sf3b2	97	67.742	MGP_PahariEiJ_G0014036	Sf3b2	86	71.613	Mus_pahari
ENSHBUG00000017349	sf3b2	97	67.857	MGP_SPRETEiJ_G0023453	Sf3b2	86	72.000	Mus_spretus
ENSHBUG00000017349	sf3b2	87	74.738	ENSMPUG00000011349	SF3B2	85	73.575	Mustela_putorius_furo
ENSHBUG00000017349	sf3b2	87	74.476	ENSMLUG00000011136	SF3B2	85	73.705	Myotis_lucifugus
ENSHBUG00000017349	sf3b2	85	73.440	ENSNGAG00000012103	Sf3b2	86	72.000	Nannospalax_galili
ENSHBUG00000017349	sf3b2	87	71.373	ENSNLEG00000006007	SF3B2	86	70.897	Nomascus_leucogenys
ENSHBUG00000017349	sf3b2	78	84.746	ENSMEUG00000000019	SF3B2	81	84.746	Notamacropus_eugenii
ENSHBUG00000017349	sf3b2	100	63.676	ENSODEG00000017764	SF3B2	84	68.277	Octodon_degus
ENSHBUG00000017349	sf3b2	100	96.211	ENSONIG00000013068	sf3b2	100	96.211	Oreochromis_niloticus
ENSHBUG00000017349	sf3b2	87	66.795	ENSOANG00000012482	SF3B2	87	82.249	Ornithorhynchus_anatinus
ENSHBUG00000017349	sf3b2	58	49.903	ENSOCUG00000024154	-	95	49.407	Oryctolagus_cuniculus
ENSHBUG00000017349	sf3b2	97	71.580	ENSOCUG00000015722	-	97	69.222	Oryctolagus_cuniculus
ENSHBUG00000017349	sf3b2	100	87.441	ENSORLG00000008235	sf3b2	97	87.192	Oryzias_latipes
ENSHBUG00000017349	sf3b2	100	87.441	ENSORLG00020005357	sf3b2	100	87.192	Oryzias_latipes_hni
ENSHBUG00000017349	sf3b2	100	87.854	ENSORLG00015022454	sf3b2	95	80.645	Oryzias_latipes_hsok
ENSHBUG00000017349	sf3b2	100	86.423	ENSOMEG00000017480	sf3b2	100	86.659	Oryzias_melastigma
ENSHBUG00000017349	sf3b2	100	63.978	ENSOGAG00000005799	SF3B2	86	70.323	Otolemur_garnettii
ENSHBUG00000017349	sf3b2	97	67.586	ENSOARG00000002125	SF3B2	100	75.337	Ovis_aries
ENSHBUG00000017349	sf3b2	97	68.403	ENSPPAG00000007359	SF3B2	88	72.075	Pan_paniscus
ENSHBUG00000017349	sf3b2	87	74.738	ENSPPRG00000013334	SF3B2	97	66.705	Panthera_pardus
ENSHBUG00000017349	sf3b2	87	74.738	ENSPTIG00000015022	SF3B2	97	66.705	Panthera_tigris_altaica
ENSHBUG00000017349	sf3b2	97	68.131	ENSPTRG00000003912	SF3B2	88	72.075	Pan_troglodytes
ENSHBUG00000017349	sf3b2	87	74.708	ENSPANG00000008593	SF3B2	88	73.161	Papio_anubis
ENSHBUG00000017349	sf3b2	100	76.431	ENSPKIG00000016576	sf3b2	100	76.629	Paramormyrops_kingsleyae
ENSHBUG00000017349	sf3b2	87	74.574	ENSPSIG00000003158	SF3B2	97	75.393	Pelodiscus_sinensis
ENSHBUG00000017349	sf3b2	87	80.376	ENSPMGG00000000819	sf3b2	100	76.693	Periophthalmus_magnuspinnatus
ENSHBUG00000017349	sf3b2	97	68.088	ENSPEMG00000015437	Sf3b2	86	71.871	Peromyscus_maniculatus_bairdii
ENSHBUG00000017349	sf3b2	88	66.093	ENSPEMG00000015451	-	90	68.450	Peromyscus_maniculatus_bairdii
ENSHBUG00000017349	sf3b2	95	65.777	ENSPCIG00000008381	SF3B2	99	68.735	Phascolarctos_cinereus
ENSHBUG00000017349	sf3b2	100	84.589	ENSPFOG00000002552	sf3b2	100	84.211	Poecilia_formosa
ENSHBUG00000017349	sf3b2	100	84.439	ENSPLAG00000001471	sf3b2	100	84.325	Poecilia_latipinna
ENSHBUG00000017349	sf3b2	100	84.343	ENSPMEG00000013180	sf3b2	100	83.849	Poecilia_mexicana
ENSHBUG00000017349	sf3b2	100	81.943	ENSPREG00000002665	sf3b2	100	83.314	Poecilia_reticulata
ENSHBUG00000017349	sf3b2	59	69.043	ENSPPYG00000003034	-	79	66.853	Pongo_abelii
ENSHBUG00000017349	sf3b2	87	75.130	ENSPCAG00000005129	SF3B2	97	66.136	Procavia_capensis
ENSHBUG00000017349	sf3b2	97	68.475	ENSPCOG00000025375	SF3B2	86	73.067	Propithecus_coquereli
ENSHBUG00000017349	sf3b2	55	93.421	ENSPVAG00000005466	-	81	93.421	Pteropus_vampyrus
ENSHBUG00000017349	sf3b2	92	96.423	ENSPNYG00000023594	sf3b2	100	98.305	Pundamilia_nyererei
ENSHBUG00000017349	sf3b2	100	75.307	ENSPNAG00000001891	sf3b2	100	75.336	Pygocentrus_nattereri
ENSHBUG00000017349	sf3b2	85	73.838	ENSRNOG00000020412	Sf3b2	86	71.742	Rattus_norvegicus
ENSHBUG00000017349	sf3b2	87	75.033	ENSRBIG00000034065	SF3B2	86	73.161	Rhinopithecus_bieti
ENSHBUG00000017349	sf3b2	87	75.033	ENSRROG00000034496	SF3B2	86	73.161	Rhinopithecus_roxellana
ENSHBUG00000017349	sf3b2	97	69.309	ENSSBOG00000026337	SF3B2	97	67.972	Saimiri_boliviensis_boliviensis
ENSHBUG00000017349	sf3b2	97	61.878	ENSSHAG00000010933	-	97	64.374	Sarcophilus_harrisii
ENSHBUG00000017349	sf3b2	96	56.895	ENSSHAG00000018043	-	88	62.037	Sarcophilus_harrisii
ENSHBUG00000017349	sf3b2	100	75.831	ENSSFOG00015021125	sf3b2	100	74.724	Scleropages_formosus
ENSHBUG00000017349	sf3b2	100	88.182	ENSSMAG00000004079	sf3b2	100	85.914	Scophthalmus_maximus
ENSHBUG00000017349	sf3b2	61	97.701	ENSSDUG00000008499	sf3b2	100	82.880	Seriola_dumerili
ENSHBUG00000017349	sf3b2	100	87.923	ENSSLDG00000006838	sf3b2	100	89.278	Seriola_lalandi_dorsalis
ENSHBUG00000017349	sf3b2	74	80.885	ENSSPUG00000009198	SF3B2	84	74.069	Sphenodon_punctatus
ENSHBUG00000017349	sf3b2	100	87.906	ENSSPAG00000004406	sf3b2	100	88.578	Stegastes_partitus
ENSHBUG00000017349	sf3b2	87	75.591	ENSSSCG00000012957	SF3B2	85	73.609	Sus_scrofa
ENSHBUG00000017349	sf3b2	91	80.645	ENSTRUG00000007611	sf3b2	99	80.645	Takifugu_rubripes
ENSHBUG00000017349	sf3b2	97	79.318	ENSTNIG00000007441	sf3b2	100	79.788	Tetraodon_nigroviridis
ENSHBUG00000017349	sf3b2	86	67.313	ENSTBEG00000004258	SF3B2	84	66.898	Tupaia_belangeri
ENSHBUG00000017349	sf3b2	87	75.000	ENSTTRG00000014339	SF3B2	97	65.420	Tursiops_truncatus
ENSHBUG00000017349	sf3b2	85	74.224	ENSUAMG00000020754	SF3B2	96	61.988	Ursus_americanus
ENSHBUG00000017349	sf3b2	87	74.738	ENSUMAG00000010994	SF3B2	85	73.705	Ursus_maritimus
ENSHBUG00000017349	sf3b2	60	85.000	ENSVPAG00000008695	SF3B2	64	85.000	Vicugna_pacos
ENSHBUG00000017349	sf3b2	87	74.607	ENSVVUG00000027029	SF3B2	97	65.079	Vulpes_vulpes
ENSHBUG00000017349	sf3b2	91	65.700	ENSXETG00000008422	sf3b2	94	68.598	Xenopus_tropicalis
ENSHBUG00000017349	sf3b2	88	76.841	ENSXCOG00000008943	sf3b2	93	76.070	Xiphophorus_couchianus
ENSHBUG00000017349	sf3b2	100	83.390	ENSXMAG00000008467	sf3b2	100	83.276	Xiphophorus_maculatus