EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000017773 (Gene tree)
Gene ID
102291657
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
30127 bases
Position
chrJH425460.1:776009-806135
Accession
102291657
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000031810tRNA_anti-codonPF01336.252e-1211
ENSHBUP00000031824tRNA_anti-codonPF01336.252.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000024169-3284XM_005932014ENSHBUP00000031824602 (aa)XP_005932076UPI0003BDA22A
ENSHBUT00000024142-1788-ENSHBUP00000031810595 (aa)--
Gene Model
Click here to download ENSHBUG00000017773's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017773's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000017773rpa19658.904ENSHBUG00000009348RPA19958.904
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000017773rpa19988.519ENSAPOG00000011658rpa110088.519Acanthochromis_polyacanthus
ENSHBUG00000017773rpa19470.362ENSAPOG00000019409RPA18870.362Acanthochromis_polyacanthus
ENSHBUG00000017773rpa19664.646ENSAMEG00000007706RPA19664.646Ailuropoda_melanoleuca
ENSHBUG00000017773rpa19684.602ENSACIG00000007277rpa110084.602Amphilophus_citrinellus
ENSHBUG00000017773rpa19563.032ENSACIG00000012881RPA19963.032Amphilophus_citrinellus
ENSHBUG00000017773rpa19989.185ENSAOCG00000023376rpa110089.185Amphiprion_ocellaris
ENSHBUG00000017773rpa19959.042ENSAOCG00000009003RPA19959.225Amphiprion_ocellaris
ENSHBUG00000017773rpa19958.157ENSAPEG00000019132RPA19958.182Amphiprion_percula
ENSHBUG00000017773rpa19989.185ENSAPEG00000008634rpa110089.185Amphiprion_percula
ENSHBUG00000017773rpa19489.362ENSATEG00000022024rpa19989.362Anabas_testudineus
ENSHBUG00000017773rpa19961.051ENSATEG00000006443RPA19961.051Anabas_testudineus
ENSHBUG00000017773rpa19855.178ENSAPLG00000012442RPA110055.687Anas_platyrhynchos
ENSHBUG00000017773rpa19958.113ENSACAG00000014490RPA19859.008Anolis_carolinensis
ENSHBUG00000017773rpa19664.081ENSANAG00000023456RPA19864.081Aotus_nancymaae
ENSHBUG00000017773rpa19963.150ENSACLG00000005223RPA19963.150Astatotilapia_calliptera
ENSHBUG00000017773rpa19499.820ENSACLG00000006640rpa110099.820Astatotilapia_calliptera
ENSHBUG00000017773rpa19979.299ENSAMXG00000008418rpa19979.466Astyanax_mexicanus
ENSHBUG00000017773rpa19962.684ENSBTAG00000009711RPA19962.684Bos_taurus
ENSHBUG00000017773rpa17233.410WBGene00017546rpa-16533.410Caenorhabditis_elegans
ENSHBUG00000017773rpa19961.401ENSCJAG00000001848RPA19961.928Callithrix_jacchus
ENSHBUG00000017773rpa19963.011ENSCAFG00000019249RPA19963.339Canis_familiaris
ENSHBUG00000017773rpa19963.011ENSCAFG00020009847RPA19963.339Canis_lupus_dingo
ENSHBUG00000017773rpa19962.643ENSCHIG00000026308RPA19963.175Capra_hircus
ENSHBUG00000017773rpa19962.378ENSTSYG00000003482-9962.378Carlito_syrichta
ENSHBUG00000017773rpa19962.927ENSCPOG00000000035RPA19962.927Cavia_porcellus
ENSHBUG00000017773rpa19952.188ENSCCAG00000010981RPA19952.683Cebus_capucinus
ENSHBUG00000017773rpa19959.283ENSCLAG00000015045-9959.283Chinchilla_lanigera
ENSHBUG00000017773rpa19962.927ENSCLAG00000005185-9962.927Chinchilla_lanigera
ENSHBUG00000017773rpa19953.571ENSCSAG00000013833RPA19953.571Chlorocebus_sabaeus
ENSHBUG00000017773rpa19562.818ENSCHOG00000013540-9962.818Choloepus_hoffmanni
ENSHBUG00000017773rpa17371.330ENSCHOG00000009454-9971.330Choloepus_hoffmanni
ENSHBUG00000017773rpa19964.860ENSCPBG00000020377RPA19965.845Chrysemys_picta_bellii
ENSHBUG00000017773rpa19944.279ENSCING00000023482-9944.279Ciona_intestinalis
ENSHBUG00000017773rpa19565.554ENSCANG00000030911RPA19765.554Colobus_angolensis_palliatus
ENSHBUG00000017773rpa19962.643ENSCGRG00001008197Rpa19962.643Cricetulus_griseus_chok1gshd
ENSHBUG00000017773rpa18165.020ENSCGRG00000000582Rpa19965.020Cricetulus_griseus_crigri
ENSHBUG00000017773rpa19981.188ENSCSEG00000013066rpa19981.188Cynoglossus_semilaevis
ENSHBUG00000017773rpa19957.051ENSCSEG00000012726RPA19958.662Cynoglossus_semilaevis
ENSHBUG00000017773rpa19985.974ENSCVAG00000019431rpa19986.139Cyprinodon_variegatus
ENSHBUG00000017773rpa18671.739ENSCVAG00000013446-9658.631Cyprinodon_variegatus
ENSHBUG00000017773rpa19977.129ENSDARG00000003938rpa19977.129Danio_rerio
ENSHBUG00000017773rpa19664.418ENSDNOG00000017218RPA19664.418Dasypus_novemcinctus
ENSHBUG00000017773rpa19963.339ENSDORG00000006199Rpa19963.502Dipodomys_ordii
ENSHBUG00000017773rpa19940.946FBgn0010173RpA-709941.667Drosophila_melanogaster
ENSHBUG00000017773rpa18274.227ENSETEG00000017608RPA18272.000Echinops_telfairi
ENSHBUG00000017773rpa19664.676ENSEASG00005009372RPA19965.714Equus_asinus_asinus
ENSHBUG00000017773rpa19963.175ENSECAG00000023886RPA19963.339Equus_caballus
ENSHBUG00000017773rpa17070.883ENSEEUG00000002186-6870.883Erinaceus_europaeus
ENSHBUG00000017773rpa19980.858ENSELUG00000021071rpa19980.858Esox_lucius
ENSHBUG00000017773rpa18865.160ENSELUG00000006136RPA19965.160Esox_lucius
ENSHBUG00000017773rpa19963.562ENSFCAG00000006306RPA19963.562Felis_catus
ENSHBUG00000017773rpa19963.235ENSFALG00000006575RPA19963.235Ficedula_albicollis
ENSHBUG00000017773rpa19963.725ENSFDAG00000007720RPA19963.725Fukomys_damarensis
ENSHBUG00000017773rpa19985.762ENSFHEG00000003580rpa19985.762Fundulus_heteroclitus
ENSHBUG00000017773rpa19976.717ENSGMOG00000010382rpa19976.717Gadus_morhua
ENSHBUG00000017773rpa19962.562ENSGALG00000003072RPA19962.562Gallus_gallus
ENSHBUG00000017773rpa19985.833ENSGAFG00000012916rpa19985.833Gambusia_affinis
ENSHBUG00000017773rpa19958.436ENSGAFG00000020953RPA19958.994Gambusia_affinis
ENSHBUG00000017773rpa19984.385ENSGACG00000010856rpa19984.385Gasterosteus_aculeatus
ENSHBUG00000017773rpa19964.368ENSGAGG00000013611RPA19964.368Gopherus_agassizii
ENSHBUG00000017773rpa19963.228ENSGGOG00000014186RPA19963.228Gorilla_gorilla
ENSHBUG00000017773rpa19963.072ENSHGLG00000008846RPA19963.235Heterocephalus_glaber_female
ENSHBUG00000017773rpa19963.072ENSHGLG00100017755-9963.235Heterocephalus_glaber_male
ENSHBUG00000017773rpa19953.758ENSHGLG00100002005-9953.758Heterocephalus_glaber_male
ENSHBUG00000017773rpa19958.824ENSHGLG00100000799-9958.824Heterocephalus_glaber_male
ENSHBUG00000017773rpa19975.490ENSHCOG00000001401rpa19975.490Hippocampus_comes
ENSHBUG00000017773rpa19944.737ENSHCOG00000000351RPA19944.737Hippocampus_comes
ENSHBUG00000017773rpa19978.182ENSIPUG00000004400rpa19978.182Ictalurus_punctatus
ENSHBUG00000017773rpa19559.832ENSSTOG00000022475RPA19959.832Ictidomys_tridecemlineatus
ENSHBUG00000017773rpa19664.467ENSJJAG00000000876Rpa19864.467Jaculus_jaculus
ENSHBUG00000017773rpa19961.120ENSKMAG00000000234RPA19961.120Kryptolebias_marmoratus
ENSHBUG00000017773rpa19983.306ENSKMAG00000005605rpa19983.470Kryptolebias_marmoratus
ENSHBUG00000017773rpa19985.455ENSLBEG00000021604rpa110085.455Labrus_bergylta
ENSHBUG00000017773rpa19771.789ENSLBEG00000002281RPA18371.789Labrus_bergylta
ENSHBUG00000017773rpa18061.885ENSLACG00000007210RPA19961.885Latimeria_chalumnae
ENSHBUG00000017773rpa19973.597ENSLOCG00000006397rpa19973.884Lepisosteus_oculatus
ENSHBUG00000017773rpa19961.774ENSLAFG00000015354RPA19961.774Loxodonta_africana
ENSHBUG00000017773rpa18061.336ENSMFAG00000036138-9861.818Macaca_fascicularis
ENSHBUG00000017773rpa19664.020ENSMMUG00000011604-9864.418Macaca_mulatta
ENSHBUG00000017773rpa19958.155ENSMMUG00000002442-9958.155Macaca_mulatta
ENSHBUG00000017773rpa19955.058ENSMNEG00000029837-9955.058Macaca_nemestrina
ENSHBUG00000017773rpa19663.328ENSMNEG00000031632-9863.729Macaca_nemestrina
ENSHBUG00000017773rpa19660.504ENSMLEG00000038768-9861.008Mandrillus_leucophaeus
ENSHBUG00000017773rpa19990.333ENSMAMG00000017993rpa19990.333Mastacembelus_armatus
ENSHBUG00000017773rpa19772.093ENSMAMG00000020097RPA19958.321Mastacembelus_armatus
ENSHBUG00000017773rpa110099.336ENSMZEG00005007551rpa110099.336Maylandia_zebra
ENSHBUG00000017773rpa19963.150ENSMZEG00005024731RPA19963.150Maylandia_zebra
ENSHBUG00000017773rpa19961.983ENSMGAG00000005315RPA19861.983Meleagris_gallopavo
ENSHBUG00000017773rpa19663.790ENSMAUG00000010474Rpa19864.237Mesocricetus_auratus
ENSHBUG00000017773rpa19963.607ENSMICG00000012867RPA19963.607Microcebus_murinus
ENSHBUG00000017773rpa19963.054ENSMOCG00000013019Rpa19963.054Microtus_ochrogaster
ENSHBUG00000017773rpa19983.667ENSMMOG00000014292rpa19985.862Mola_mola
ENSHBUG00000017773rpa19862.500ENSMMOG00000010868RPA19862.500Mola_mola
ENSHBUG00000017773rpa19962.439ENSMODG00000010549RPA19962.439Monodelphis_domestica
ENSHBUG00000017773rpa19989.667ENSMALG00000011453rpa19989.667Monopterus_albus
ENSHBUG00000017773rpa19972.311ENSMALG00000001208RPA18672.311Monopterus_albus
ENSHBUG00000017773rpa19963.235MGP_CAROLIEiJ_G0016734Rpa19963.502Mus_caroli
ENSHBUG00000017773rpa19962.460ENSMUSG00000000751Rpa19962.723Mus_musculus
ENSHBUG00000017773rpa19963.252MGP_PahariEiJ_G0017871Rpa19963.518Mus_pahari
ENSHBUG00000017773rpa19962.359MGP_SPRETEiJ_G0017577Rpa19962.621Mus_spretus
ENSHBUG00000017773rpa19963.830ENSMPUG00000013119RPA19963.830Mustela_putorius_furo
ENSHBUG00000017773rpa19663.575ENSMLUG00000006113RPA19563.575Myotis_lucifugus
ENSHBUG00000017773rpa19564.116ENSNGAG00000004522Rpa19464.116Nannospalax_galili
ENSHBUG00000017773rpa19599.467ENSNBRG00000020595rpa110099.467Neolamprologus_brichardi
ENSHBUG00000017773rpa19861.204ENSNBRG00000009672RPA19761.204Neolamprologus_brichardi
ENSHBUG00000017773rpa19963.029ENSNLEG00000017149RPA19962.969Nomascus_leucogenys
ENSHBUG00000017773rpa19654.822ENSMEUG00000006714RPA19754.822Notamacropus_eugenii
ENSHBUG00000017773rpa19663.043ENSODEG00000009038RPA19763.043Octodon_degus
ENSHBUG00000017773rpa110096.254ENSONIG00000013135rpa19996.254Oreochromis_niloticus
ENSHBUG00000017773rpa19863.682ENSOANG00000010880RPA19963.682Ornithorhynchus_anatinus
ENSHBUG00000017773rpa19960.686ENSOCUG00000001504RPA19960.686Oryctolagus_cuniculus
ENSHBUG00000017773rpa19985.977ENSORLG00000004856rpa19985.977Oryzias_latipes
ENSHBUG00000017773rpa19957.846ENSORLG00000003368RPA19957.846Oryzias_latipes
ENSHBUG00000017773rpa19986.144ENSORLG00020008980rpa19986.144Oryzias_latipes_hni
ENSHBUG00000017773rpa19667.778ENSORLG00020015284RPA18767.778Oryzias_latipes_hni
ENSHBUG00000017773rpa17166.667ENSORLG00015005867-9766.667Oryzias_latipes_hsok
ENSHBUG00000017773rpa19958.216ENSORLG00015020383RPA19958.216Oryzias_latipes_hsok
ENSHBUG00000017773rpa19986.144ENSORLG00015013982rpa19986.144Oryzias_latipes_hsok
ENSHBUG00000017773rpa19560.209ENSOMEG00000011040RPA19960.457Oryzias_melastigma
ENSHBUG00000017773rpa19982.972ENSOMEG00000004704rpa19982.972Oryzias_melastigma
ENSHBUG00000017773rpa19963.072ENSOGAG00000005581-9963.072Otolemur_garnettii
ENSHBUG00000017773rpa17575.275ENSOGAG00000029379-9875.275Otolemur_garnettii
ENSHBUG00000017773rpa19962.643ENSOARG00000014479RPA19963.175Ovis_aries
ENSHBUG00000017773rpa19963.192ENSPPAG00000039680RPA19963.132Pan_paniscus
ENSHBUG00000017773rpa19963.399ENSPPRG00000011807RPA19963.399Panthera_pardus
ENSHBUG00000017773rpa19963.399ENSPTIG00000007898RPA19963.399Panthera_tigris_altaica
ENSHBUG00000017773rpa19963.518ENSPTRG00000008539RPA19963.458Pan_troglodytes
ENSHBUG00000017773rpa19962.908ENSPANG00000024592RPA19963.295Papio_anubis
ENSHBUG00000017773rpa19975.041ENSPKIG00000008053rpa19875.537Paramormyrops_kingsleyae
ENSHBUG00000017773rpa19664.865ENSPSIG00000015617RPA19864.865Pelodiscus_sinensis
ENSHBUG00000017773rpa19958.852ENSPMGG00000000543RPA19963.082Periophthalmus_magnuspinnatus
ENSHBUG00000017773rpa19981.970ENSPMGG00000011589rpa19884.859Periophthalmus_magnuspinnatus
ENSHBUG00000017773rpa19963.547ENSPEMG00000021061Rpa19963.547Peromyscus_maniculatus_bairdii
ENSHBUG00000017773rpa19962.276ENSPCIG00000019049RPA19962.316Phascolarctos_cinereus
ENSHBUG00000017773rpa19986.833ENSPFOG00000003987rpa19986.833Poecilia_formosa
ENSHBUG00000017773rpa19986.667ENSPLAG00000004984rpa19986.667Poecilia_latipinna
ENSHBUG00000017773rpa19459.187ENSPLAG00000008844-9659.187Poecilia_latipinna
ENSHBUG00000017773rpa19458.537ENSPMEG00000003627-9658.833Poecilia_mexicana
ENSHBUG00000017773rpa19987.000ENSPMEG00000020602rpa19987.000Poecilia_mexicana
ENSHBUG00000017773rpa19379.070ENSPREG00000010174rpa19578.929Poecilia_reticulata
ENSHBUG00000017773rpa19271.854ENSPREG00000010119RPA18271.854Poecilia_reticulata
ENSHBUG00000017773rpa19963.235ENSPCOG00000001799RPA19963.235Propithecus_coquereli
ENSHBUG00000017773rpa19961.889ENSPVAG00000002149RPA19961.889Pteropus_vampyrus
ENSHBUG00000017773rpa110099.668ENSPNYG00000016316rpa110099.821Pundamilia_nyererei
ENSHBUG00000017773rpa19962.992ENSPNYG00000024165RPA19962.992Pundamilia_nyererei
ENSHBUG00000017773rpa19969.916ENSPNAG00000008599rpa19672.028Pygocentrus_nattereri
ENSHBUG00000017773rpa19670.388ENSRNOG00000003123Rpa19964.039Rattus_norvegicus
ENSHBUG00000017773rpa19962.541ENSRBIG00000036587RPA19962.541Rhinopithecus_bieti
ENSHBUG00000017773rpa19957.655ENSRROG00000043278RPA19957.655Rhinopithecus_roxellana
ENSHBUG00000017773rpa19531.481YAR007CRFA19431.481Saccharomyces_cerevisiae
ENSHBUG00000017773rpa19164.413ENSSBOG00000030233RPA19765.000Saimiri_boliviensis_boliviensis
ENSHBUG00000017773rpa19862.233ENSSHAG00000007969RPA19564.141Sarcophilus_harrisii
ENSHBUG00000017773rpa19981.095ENSSFOG00015005362rpa19281.095Scleropages_formosus
ENSHBUG00000017773rpa19957.686ENSSMAG00000019746RPA19957.727Scophthalmus_maximus
ENSHBUG00000017773rpa19990.833ENSSDUG00000011949rpa19990.833Seriola_dumerili
ENSHBUG00000017773rpa19272.685ENSSDUG00000016358RPA19172.374Seriola_dumerili
ENSHBUG00000017773rpa19991.167ENSSLDG00000011806rpa19991.167Seriola_lalandi_dorsalis
ENSHBUG00000017773rpa19271.991ENSSLDG00000020784RPA19171.689Seriola_lalandi_dorsalis
ENSHBUG00000017773rpa18578.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSHBUG00000017773rpa19663.203ENSSPUG00000007223RPA19863.203Sphenodon_punctatus
ENSHBUG00000017773rpa19964.250ENSSPAG00000011165RPA19964.250Stegastes_partitus
ENSHBUG00000017773rpa19990.833ENSSPAG00000009903rpa19990.833Stegastes_partitus
ENSHBUG00000017773rpa19962.895ENSSSCG00000017822RPA19864.189Sus_scrofa
ENSHBUG00000017773rpa19962.623ENSTGUG00000005775RPA19962.623Taeniopygia_guttata
ENSHBUG00000017773rpa19983.667ENSTRUG00000003616rpa19983.667Takifugu_rubripes
ENSHBUG00000017773rpa19971.495ENSTRUG00000000405RPA18671.101Takifugu_rubripes
ENSHBUG00000017773rpa19985.270ENSTNIG00000016199rpa19985.550Tetraodon_nigroviridis
ENSHBUG00000017773rpa17370.909ENSTBEG00000002709RPA17470.909Tupaia_belangeri
ENSHBUG00000017773rpa19962.215ENSTTRG00000001169RPA19962.582Tursiops_truncatus
ENSHBUG00000017773rpa18875.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSHBUG00000017773rpa19962.895ENSUMAG00000009328RPA19962.908Ursus_maritimus
ENSHBUG00000017773rpa19961.084ENSVPAG00000009443RPA19961.084Vicugna_pacos
ENSHBUG00000017773rpa19962.848ENSVVUG00000021715RPA19963.175Vulpes_vulpes
ENSHBUG00000017773rpa19966.124ENSXETG00000013538rpa19967.715Xenopus_tropicalis
ENSHBUG00000017773rpa19384.794ENSXCOG00000010068rpa19484.794Xiphophorus_couchianus
ENSHBUG00000017773rpa19563.668ENSXCOG00000009899-9963.668Xiphophorus_couchianus
ENSHBUG00000017773rpa19984.667ENSXMAG00000004102rpa19985.663Xiphophorus_maculatus
ENSHBUG00000017773rpa19372.082ENSXMAG00000010333RPA18072.082Xiphophorus_maculatus

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