EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017816 (Gene tree)
Gene ID: 102306078
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 8917 bases
Position: chrJH425889.1:133741-142657
Accession: 102306078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015860	RNA_pol_A_bac	PF01000.26	2.3e-30	1	1
ENSHBUP00000015860	RNA_pol_L	PF01193.24	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033974	-	984	XM_014329398	ENSHBUP00000015860	327 (aa)	XP_014184884	-

Gene Model

Click here to download ENSHBUG00000017816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017816	polr1c	100	65.130	ENSG00000171453	POLR1C	100	65.130	Homo_sapiens
ENSHBUG00000017816	polr1c	100	79.772	ENSAPOG00000024356	polr1c	100	80.627	Acanthochromis_polyacanthus
ENSHBUG00000017816	polr1c	99	65.217	ENSAMEG00000012205	POLR1C	99	65.217	Ailuropoda_melanoleuca
ENSHBUG00000017816	polr1c	77	91.406	ENSACIG00000016268	polr1c	78	92.578	Amphilophus_citrinellus
ENSHBUG00000017816	polr1c	100	79.487	ENSAOCG00000011687	polr1c	97	80.342	Amphiprion_ocellaris
ENSHBUG00000017816	polr1c	100	80.342	ENSAPEG00000002433	polr1c	100	81.197	Amphiprion_percula
ENSHBUG00000017816	polr1c	99	81.609	ENSATEG00000005985	polr1c	99	81.609	Anabas_testudineus
ENSHBUG00000017816	polr1c	80	74.144	ENSAPLG00000002908	POLR1C	88	74.144	Anas_platyrhynchos
ENSHBUG00000017816	polr1c	86	65.563	ENSACAG00000009764	POLR1C	86	65.563	Anolis_carolinensis
ENSHBUG00000017816	polr1c	100	65.418	ENSANAG00000025805	POLR1C	99	65.418	Aotus_nancymaae
ENSHBUG00000017816	polr1c	100	88.604	ENSACLG00000006573	polr1c	100	89.459	Astatotilapia_calliptera
ENSHBUG00000017816	polr1c	100	76.657	ENSAMXG00000012062	polr1c	99	76.657	Astyanax_mexicanus
ENSHBUG00000017816	polr1c	99	66.087	ENSBTAG00000018969	POLR1C	99	66.087	Bos_taurus
ENSHBUG00000017816	polr1c	79	47.810	WBGene00019275	rpac-40	75	47.810	Caenorhabditis_elegans
ENSHBUG00000017816	polr1c	99	64.638	ENSCJAG00000005594	POLR1C	99	64.638	Callithrix_jacchus
ENSHBUG00000017816	polr1c	99	64.928	ENSCAFG00000001872	POLR1C	99	64.928	Canis_familiaris
ENSHBUG00000017816	polr1c	99	64.928	ENSCAFG00020012018	POLR1C	99	64.928	Canis_lupus_dingo
ENSHBUG00000017816	polr1c	54	30.055	ENSCAFG00020007660	POLR2C	50	30.055	Canis_lupus_dingo
ENSHBUG00000017816	polr1c	99	65.607	ENSCHIG00000004352	POLR1C	99	65.607	Capra_hircus
ENSHBUG00000017816	polr1c	99	65.217	ENSTSYG00000011921	POLR1C	99	65.217	Carlito_syrichta
ENSHBUG00000017816	polr1c	81	71.698	ENSCAPG00000015364	POLR1C	78	71.698	Cavia_aperea
ENSHBUG00000017816	polr1c	100	66.282	ENSCPOG00000038098	POLR1C	100	66.282	Cavia_porcellus
ENSHBUG00000017816	polr1c	99	64.928	ENSCCAG00000020169	POLR1C	99	64.928	Cebus_capucinus
ENSHBUG00000017816	polr1c	100	65.130	ENSCATG00000044045	POLR1C	100	65.130	Cercocebus_atys
ENSHBUG00000017816	polr1c	98	66.765	ENSCLAG00000009266	POLR1C	98	66.765	Chinchilla_lanigera
ENSHBUG00000017816	polr1c	100	64.553	ENSCSAG00000011913	POLR1C	100	64.553	Chlorocebus_sabaeus
ENSHBUG00000017816	polr1c	65	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSHBUG00000017816	polr1c	100	69.452	ENSCPBG00000025203	POLR1C	100	69.452	Chrysemys_picta_bellii
ENSHBUG00000017816	polr1c	99	48.547	ENSCING00000003563	-	99	48.547	Ciona_intestinalis
ENSHBUG00000017816	polr1c	100	65.130	ENSCANG00000043167	POLR1C	100	65.130	Colobus_angolensis_palliatus
ENSHBUG00000017816	polr1c	99	64.638	ENSCGRG00001017533	Polr1c	99	64.638	Cricetulus_griseus_chok1gshd
ENSHBUG00000017816	polr1c	80	71.103	ENSCGRG00000013225	Polr1c	88	71.103	Cricetulus_griseus_crigri
ENSHBUG00000017816	polr1c	100	78.963	ENSCSEG00000018097	polr1c	100	78.963	Cynoglossus_semilaevis
ENSHBUG00000017816	polr1c	65	91.509	ENSCVAG00000005684	polr1c	88	90.455	Cyprinodon_variegatus
ENSHBUG00000017816	polr1c	100	74.928	ENSDARG00000039400	polr1c	96	74.928	Danio_rerio
ENSHBUG00000017816	polr1c	98	66.471	ENSDNOG00000042693	POLR1C	98	66.471	Dasypus_novemcinctus
ENSHBUG00000017816	polr1c	99	66.087	ENSDORG00000000429	Polr1c	99	66.087	Dipodomys_ordii
ENSHBUG00000017816	polr1c	80	54.198	FBgn0031657	CG3756	78	54.198	Drosophila_melanogaster
ENSHBUG00000017816	polr1c	98	62.647	ENSETEG00000010807	POLR1C	98	62.647	Echinops_telfairi
ENSHBUG00000017816	polr1c	97	62.500	ENSEBUG00000013725	polr1c	97	62.500	Eptatretus_burgeri
ENSHBUG00000017816	polr1c	99	64.928	ENSEASG00005003338	POLR1C	99	64.928	Equus_asinus_asinus
ENSHBUG00000017816	polr1c	99	64.928	ENSECAG00000023516	POLR1C	98	64.928	Equus_caballus
ENSHBUG00000017816	polr1c	99	66.667	ENSEEUG00000005471	POLR1C	99	66.667	Erinaceus_europaeus
ENSHBUG00000017816	polr1c	100	75.793	ENSELUG00000013027	polr1c	100	75.793	Esox_lucius
ENSHBUG00000017816	polr1c	99	65.217	ENSFCAG00000009735	POLR1C	99	65.217	Felis_catus
ENSHBUG00000017816	polr1c	93	67.183	ENSFALG00000012111	POLR1C	100	67.183	Ficedula_albicollis
ENSHBUG00000017816	polr1c	99	65.507	ENSFDAG00000008428	POLR1C	99	65.507	Fukomys_damarensis
ENSHBUG00000017816	polr1c	100	66.859	ENSFHEG00000000262	polr1c	100	67.435	Fundulus_heteroclitus
ENSHBUG00000017816	polr1c	93	75.617	ENSGMOG00000013878	polr1c	100	75.617	Gadus_morhua
ENSHBUG00000017816	polr1c	100	67.147	ENSGALG00000010349	POLR1C	100	67.147	Gallus_gallus
ENSHBUG00000017816	polr1c	100	78.348	ENSGAFG00000010153	polr1c	100	78.917	Gambusia_affinis
ENSHBUG00000017816	polr1c	100	75.499	ENSGACG00000002453	polr1c	100	76.638	Gasterosteus_aculeatus
ENSHBUG00000017816	polr1c	100	68.588	ENSGAGG00000010640	POLR1C	100	68.588	Gopherus_agassizii
ENSHBUG00000017816	polr1c	100	65.130	ENSGGOG00000010903	POLR1C	100	65.130	Gorilla_gorilla
ENSHBUG00000017816	polr1c	99	65.217	ENSHGLG00000019441	POLR1C	100	71.538	Heterocephalus_glaber_female
ENSHBUG00000017816	polr1c	99	65.507	ENSHGLG00100005970	POLR1C	100	71.538	Heterocephalus_glaber_male
ENSHBUG00000017816	polr1c	98	76.232	ENSHCOG00000002179	polr1c	99	76.232	Hippocampus_comes
ENSHBUG00000017816	polr1c	99	75.802	ENSIPUG00000024464	polr1c	99	75.802	Ictalurus_punctatus
ENSHBUG00000017816	polr1c	99	65.797	ENSSTOG00000010631	POLR1C	99	65.797	Ictidomys_tridecemlineatus
ENSHBUG00000017816	polr1c	99	65.217	ENSJJAG00000023110	Polr1c	99	65.217	Jaculus_jaculus
ENSHBUG00000017816	polr1c	100	77.493	ENSKMAG00000014305	polr1c	97	78.348	Kryptolebias_marmoratus
ENSHBUG00000017816	polr1c	100	80.057	ENSLBEG00000014925	polr1c	100	80.912	Labrus_bergylta
ENSHBUG00000017816	polr1c	94	57.910	ENSLACG00000012567	POLR1C	98	57.910	Latimeria_chalumnae
ENSHBUG00000017816	polr1c	100	72.622	ENSLOCG00000016710	polr1c	96	72.622	Lepisosteus_oculatus
ENSHBUG00000017816	polr1c	81	72.727	ENSLAFG00000026248	POLR1C	88	72.727	Loxodonta_africana
ENSHBUG00000017816	polr1c	54	30.055	ENSLAFG00000027230	POLR2C	62	30.055	Loxodonta_africana
ENSHBUG00000017816	polr1c	100	64.841	ENSMFAG00000046295	POLR1C	100	64.841	Macaca_fascicularis
ENSHBUG00000017816	polr1c	100	64.841	ENSMMUG00000015192	POLR1C	100	64.841	Macaca_mulatta
ENSHBUG00000017816	polr1c	100	64.841	ENSMNEG00000028073	POLR1C	100	64.841	Macaca_nemestrina
ENSHBUG00000017816	polr1c	100	64.841	ENSMLEG00000034818	POLR1C	100	64.841	Mandrillus_leucophaeus
ENSHBUG00000017816	polr1c	100	81.197	ENSMAMG00000008700	polr1c	100	81.197	Mastacembelus_armatus
ENSHBUG00000017816	polr1c	100	88.319	ENSMZEG00005018545	polr1c	100	89.174	Maylandia_zebra
ENSHBUG00000017816	polr1c	80	74.905	ENSMGAG00000011020	POLR1C	92	74.905	Meleagris_gallopavo
ENSHBUG00000017816	polr1c	99	64.638	ENSMAUG00000014329	Polr1c	99	64.638	Mesocricetus_auratus
ENSHBUG00000017816	polr1c	99	64.058	ENSMICG00000005027	POLR1C	99	64.058	Microcebus_murinus
ENSHBUG00000017816	polr1c	99	65.217	ENSMOCG00000017549	Polr1c	99	65.217	Microtus_ochrogaster
ENSHBUG00000017816	polr1c	100	64.553	ENSMMOG00000005380	polr1c	100	65.130	Mola_mola
ENSHBUG00000017816	polr1c	80	73.764	ENSMODG00000018964	POLR1C	90	73.764	Monodelphis_domestica
ENSHBUG00000017816	polr1c	54	30.899	ENSMODG00000013540	POLR2C	61	30.899	Monodelphis_domestica
ENSHBUG00000017816	polr1c	100	69.164	ENSMALG00000011711	polr1c	100	69.741	Monopterus_albus
ENSHBUG00000017816	polr1c	99	68.000	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.923	Mus_caroli
ENSHBUG00000017816	polr1c	99	65.507	ENSMUSG00000067148	Polr1c	100	72.308	Mus_musculus
ENSHBUG00000017816	polr1c	99	65.797	MGP_PahariEiJ_G0020654	Polr1c	100	72.308	Mus_pahari
ENSHBUG00000017816	polr1c	99	65.507	MGP_SPRETEiJ_G0022574	Polr1c	100	72.308	Mus_spretus
ENSHBUG00000017816	polr1c	99	64.638	ENSMPUG00000012916	POLR1C	91	64.638	Mustela_putorius_furo
ENSHBUG00000017816	polr1c	99	65.507	ENSMLUG00000017751	POLR1C	99	65.507	Myotis_lucifugus
ENSHBUG00000017816	polr1c	99	65.797	ENSNGAG00000023487	Polr1c	99	65.797	Nannospalax_galili
ENSHBUG00000017816	polr1c	100	87.464	ENSNBRG00000018742	polr1c	100	88.319	Neolamprologus_brichardi
ENSHBUG00000017816	polr1c	100	65.698	ENSNLEG00000004035	POLR1C	100	65.130	Nomascus_leucogenys
ENSHBUG00000017816	polr1c	98	56.176	ENSMEUG00000006778	POLR1C	98	56.176	Notamacropus_eugenii
ENSHBUG00000017816	polr1c	76	62.172	ENSOPRG00000000145	POLR1C	99	62.172	Ochotona_princeps
ENSHBUG00000017816	polr1c	100	65.994	ENSODEG00000015831	-	100	65.994	Octodon_degus
ENSHBUG00000017816	polr1c	67	69.406	ENSODEG00000017109	-	100	69.406	Octodon_degus
ENSHBUG00000017816	polr1c	100	87.179	ENSONIG00000013133	polr1c	98	88.034	Oreochromis_niloticus
ENSHBUG00000017816	polr1c	99	64.348	ENSOANG00000003043	POLR1C	99	64.348	Ornithorhynchus_anatinus
ENSHBUG00000017816	polr1c	99	64.348	ENSOCUG00000005504	POLR1C	99	64.348	Oryctolagus_cuniculus
ENSHBUG00000017816	polr1c	100	74.644	ENSORLG00000019743	polr1c	100	74.644	Oryzias_latipes
ENSHBUG00000017816	polr1c	80	67.870	ENSORLG00020005555	polr1c	83	67.870	Oryzias_latipes_hni
ENSHBUG00000017816	polr1c	100	75.499	ENSORLG00020006489	POLR1C	100	75.499	Oryzias_latipes_hni
ENSHBUG00000017816	polr1c	100	74.929	ENSORLG00015013322	polr1c	100	74.929	Oryzias_latipes_hsok
ENSHBUG00000017816	polr1c	98	77.101	ENSOMEG00000016527	polr1c	98	77.101	Oryzias_melastigma
ENSHBUG00000017816	polr1c	99	65.418	ENSOGAG00000016318	POLR1C	99	65.418	Otolemur_garnettii
ENSHBUG00000017816	polr1c	99	65.797	ENSOARG00000007503	POLR1C	99	65.797	Ovis_aries
ENSHBUG00000017816	polr1c	100	65.130	ENSPPAG00000043678	POLR1C	100	65.130	Pan_paniscus
ENSHBUG00000017816	polr1c	99	65.217	ENSPPRG00000009760	POLR1C	99	65.217	Panthera_pardus
ENSHBUG00000017816	polr1c	99	65.217	ENSPTIG00000014813	POLR1C	99	65.217	Panthera_tigris_altaica
ENSHBUG00000017816	polr1c	100	65.130	ENSPTRG00000018202	POLR1C	100	65.130	Pan_troglodytes
ENSHBUG00000017816	polr1c	100	65.130	ENSPANG00000009025	POLR1C	99	65.130	Papio_anubis
ENSHBUG00000017816	polr1c	100	74.928	ENSPKIG00000009858	polr1c	100	74.928	Paramormyrops_kingsleyae
ENSHBUG00000017816	polr1c	100	68.876	ENSPSIG00000012580	POLR1C	94	68.876	Pelodiscus_sinensis
ENSHBUG00000017816	polr1c	50	30.814	ENSPMGG00000021249	polr2c	64	30.814	Periophthalmus_magnuspinnatus
ENSHBUG00000017816	polr1c	100	66.571	ENSPMGG00000012121	polr1c	100	67.147	Periophthalmus_magnuspinnatus
ENSHBUG00000017816	polr1c	99	64.638	ENSPEMG00000006970	Polr1c	99	64.638	Peromyscus_maniculatus_bairdii
ENSHBUG00000017816	polr1c	54	32.240	ENSPMAG00000004827	polr2c	74	32.240	Petromyzon_marinus
ENSHBUG00000017816	polr1c	99	64.451	ENSPMAG00000005560	polr1c	99	64.451	Petromyzon_marinus
ENSHBUG00000017816	polr1c	54	30.055	ENSPCIG00000015111	POLR2C	61	30.055	Phascolarctos_cinereus
ENSHBUG00000017816	polr1c	98	67.941	ENSPCIG00000028137	POLR1C	97	67.941	Phascolarctos_cinereus
ENSHBUG00000017816	polr1c	100	78.917	ENSPFOG00000014357	polr1c	98	79.487	Poecilia_formosa
ENSHBUG00000017816	polr1c	100	78.917	ENSPFOG00000014342	POLR1C	100	79.487	Poecilia_formosa
ENSHBUG00000017816	polr1c	73	84.100	ENSPLAG00000004111	polr1c	99	84.100	Poecilia_latipinna
ENSHBUG00000017816	polr1c	100	78.917	ENSPMEG00000008420	polr1c	100	79.487	Poecilia_mexicana
ENSHBUG00000017816	polr1c	100	78.917	ENSPMEG00000011877	-	100	79.487	Poecilia_mexicana
ENSHBUG00000017816	polr1c	100	80.403	ENSPREG00000007985	polr1c	100	80.403	Poecilia_reticulata
ENSHBUG00000017816	polr1c	100	64.841	ENSPPYG00000016645	POLR1C	100	64.841	Pongo_abelii
ENSHBUG00000017816	polr1c	99	64.348	ENSPCOG00000024628	POLR1C	99	64.348	Propithecus_coquereli
ENSHBUG00000017816	polr1c	99	60.116	ENSPVAG00000005689	POLR1C	99	60.116	Pteropus_vampyrus
ENSHBUG00000017816	polr1c	100	88.952	ENSPNYG00000003620	polr1c	100	89.174	Pundamilia_nyererei
ENSHBUG00000017816	polr1c	100	77.810	ENSPNAG00000008443	polr1c	100	77.810	Pygocentrus_nattereri
ENSHBUG00000017816	polr1c	99	65.217	ENSRNOG00000019079	Polr1c	100	71.154	Rattus_norvegicus
ENSHBUG00000017816	polr1c	100	65.130	ENSRBIG00000007155	POLR1C	100	65.130	Rhinopithecus_bieti
ENSHBUG00000017816	polr1c	100	65.130	ENSRROG00000000257	POLR1C	100	65.130	Rhinopithecus_roxellana
ENSHBUG00000017816	polr1c	91	45.171	YPR110C	RPC40	95	45.171	Saccharomyces_cerevisiae
ENSHBUG00000017816	polr1c	99	64.928	ENSSBOG00000025735	POLR1C	99	64.052	Saimiri_boliviensis_boliviensis
ENSHBUG00000017816	polr1c	98	67.857	ENSSHAG00000014456	POLR1C	98	67.857	Sarcophilus_harrisii
ENSHBUG00000017816	polr1c	100	76.081	ENSSFOG00015019860	polr1c	100	76.081	Scleropages_formosus
ENSHBUG00000017816	polr1c	100	81.844	ENSSMAG00000018865	polr1c	100	81.844	Scophthalmus_maximus
ENSHBUG00000017816	polr1c	100	81.481	ENSSDUG00000015745	polr1c	91	82.336	Seriola_dumerili
ENSHBUG00000017816	polr1c	100	81.481	ENSSLDG00000018285	polr1c	91	82.336	Seriola_lalandi_dorsalis
ENSHBUG00000017816	polr1c	98	65.982	ENSSPUG00000011822	POLR1C	99	65.982	Sphenodon_punctatus
ENSHBUG00000017816	polr1c	100	80.057	ENSSPAG00000022369	polr1c	100	80.912	Stegastes_partitus
ENSHBUG00000017816	polr1c	99	65.217	ENSSSCG00000028007	POLR1C	98	65.217	Sus_scrofa
ENSHBUG00000017816	polr1c	95	67.169	ENSTGUG00000009159	POLR1C	99	67.169	Taeniopygia_guttata
ENSHBUG00000017816	polr1c	100	78.348	ENSTRUG00000006264	polr1c	100	78.348	Takifugu_rubripes
ENSHBUG00000017816	polr1c	54	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSHBUG00000017816	polr1c	80	71.103	ENSTTRG00000006344	POLR1C	76	71.103	Tursiops_truncatus
ENSHBUG00000017816	polr1c	99	65.217	ENSUAMG00000025602	POLR1C	99	65.217	Ursus_americanus
ENSHBUG00000017816	polr1c	99	65.217	ENSUMAG00000005938	POLR1C	99	65.217	Ursus_maritimus
ENSHBUG00000017816	polr1c	99	62.609	ENSVVUG00000028922	POLR1C	99	62.609	Vulpes_vulpes
ENSHBUG00000017816	polr1c	54	31.461	ENSVVUG00000023516	-	59	31.461	Vulpes_vulpes
ENSHBUG00000017816	polr1c	98	61.696	ENSXETG00000010882	polr1c	99	61.696	Xenopus_tropicalis
ENSHBUG00000017816	polr1c	100	80.460	ENSXCOG00000014185	polr1c	100	80.460	Xiphophorus_couchianus
ENSHBUG00000017816	polr1c	100	79.487	ENSXMAG00000015076	polr1c	100	79.487	Xiphophorus_maculatus