EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017857 (Gene tree)
Gene ID: 102306497
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 5839 bases
Position: chrJH425389.1:2238938-2244776
Accession: 102306497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000031890	EXOSC1	PF10447.9	1.8e-15	1	1
ENSHBUP00000015921	EXOSC1	PF10447.9	1.8e-15	1	1
ENSHBUP00000015921	ECR1_N	PF14382.6	6.5e-12	1	1
ENSHBUP00000031890	ECR1_N	PF14382.6	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024299	-	2354	-	ENSHBUP00000031890	192 (aa)	-	-
ENSHBUT00000024332	-	1734	XM_005925125	ENSHBUP00000015921	194 (aa)	XP_005925187	UPI00032A04E4

Gene Model

Click here to download ENSHBUG00000017857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017857	exosc1	98	80.105	ENSG00000171311	EXOSC1	98	80.105	Homo_sapiens
ENSHBUG00000017857	exosc1	100	98.454	ENSAPOG00000007822	exosc1	100	98.454	Acanthochromis_polyacanthus
ENSHBUG00000017857	exosc1	98	80.628	ENSAMEG00000000129	EXOSC1	98	80.628	Ailuropoda_melanoleuca
ENSHBUG00000017857	exosc1	99	98.421	ENSACIG00000018956	exosc1	93	98.421	Amphilophus_citrinellus
ENSHBUG00000017857	exosc1	100	98.454	ENSAOCG00000010699	exosc1	100	98.454	Amphiprion_ocellaris
ENSHBUG00000017857	exosc1	94	86.667	ENSAPEG00000012690	exosc1	97	86.667	Amphiprion_percula
ENSHBUG00000017857	exosc1	100	98.454	ENSATEG00000018683	exosc1	100	98.454	Anabas_testudineus
ENSHBUG00000017857	exosc1	96	78.804	ENSACAG00000002101	EXOSC1	96	78.075	Anolis_carolinensis
ENSHBUG00000017857	exosc1	98	80.105	ENSANAG00000034669	EXOSC1	98	80.105	Aotus_nancymaae
ENSHBUG00000017857	exosc1	100	100.000	ENSACLG00000021243	exosc1	100	100.000	Astatotilapia_calliptera
ENSHBUG00000017857	exosc1	100	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSHBUG00000017857	exosc1	98	80.628	ENSBTAG00000012699	EXOSC1	98	80.628	Bos_taurus
ENSHBUG00000017857	exosc1	94	35.602	WBGene00012966	exos-1	92	35.602	Caenorhabditis_elegans
ENSHBUG00000017857	exosc1	98	79.581	ENSCJAG00000016586	EXOSC1	98	79.581	Callithrix_jacchus
ENSHBUG00000017857	exosc1	98	80.105	ENSCAFG00000009068	EXOSC1	92	80.105	Canis_familiaris
ENSHBUG00000017857	exosc1	98	80.105	ENSCAFG00020006002	EXOSC1	92	80.105	Canis_lupus_dingo
ENSHBUG00000017857	exosc1	98	80.628	ENSCHIG00000015253	EXOSC1	98	80.628	Capra_hircus
ENSHBUG00000017857	exosc1	98	79.058	ENSTSYG00000000760	EXOSC1	98	79.058	Carlito_syrichta
ENSHBUG00000017857	exosc1	98	80.105	ENSCPOG00000001173	EXOSC1	98	80.105	Cavia_porcellus
ENSHBUG00000017857	exosc1	98	42.487	ENSCCAG00000023986	EXOSC1	98	42.487	Cebus_capucinus
ENSHBUG00000017857	exosc1	98	80.105	ENSCATG00000034114	EXOSC1	98	80.105	Cercocebus_atys
ENSHBUG00000017857	exosc1	98	80.105	ENSCLAG00000002463	EXOSC1	98	80.105	Chinchilla_lanigera
ENSHBUG00000017857	exosc1	98	79.581	ENSCSAG00000005870	EXOSC1	98	79.581	Chlorocebus_sabaeus
ENSHBUG00000017857	exosc1	95	67.391	ENSCHOG00000006477	EXOSC1	98	67.391	Choloepus_hoffmanni
ENSHBUG00000017857	exosc1	57	67.273	ENSCPBG00000011949	EXOSC1	91	67.273	Chrysemys_picta_bellii
ENSHBUG00000017857	exosc1	99	50.777	ENSCING00000022734	-	92	50.777	Ciona_intestinalis
ENSHBUG00000017857	exosc1	99	54.404	ENSCSAVG00000010865	-	98	54.404	Ciona_savignyi
ENSHBUG00000017857	exosc1	98	80.105	ENSCANG00000034159	EXOSC1	98	80.105	Colobus_angolensis_palliatus
ENSHBUG00000017857	exosc1	98	79.058	ENSCGRG00001000335	Exosc1	98	79.058	Cricetulus_griseus_chok1gshd
ENSHBUG00000017857	exosc1	98	79.058	ENSCGRG00000011602	Exosc1	98	79.058	Cricetulus_griseus_crigri
ENSHBUG00000017857	exosc1	100	82.474	ENSCSEG00000007895	exosc1	97	82.474	Cynoglossus_semilaevis
ENSHBUG00000017857	exosc1	100	88.144	ENSCVAG00000016748	exosc1	100	88.144	Cyprinodon_variegatus
ENSHBUG00000017857	exosc1	100	94.330	ENSDARG00000059841	exosc1	100	94.330	Danio_rerio
ENSHBUG00000017857	exosc1	74	76.761	ENSDNOG00000007983	EXOSC1	98	76.552	Dasypus_novemcinctus
ENSHBUG00000017857	exosc1	98	79.581	ENSDORG00000016528	Exosc1	98	79.581	Dipodomys_ordii
ENSHBUG00000017857	exosc1	95	47.895	FBgn0032346	Csl4	92	47.895	Drosophila_melanogaster
ENSHBUG00000017857	exosc1	98	78.534	ENSETEG00000002469	-	98	78.534	Echinops_telfairi
ENSHBUG00000017857	exosc1	97	65.625	ENSEBUG00000008164	exosc1	96	65.625	Eptatretus_burgeri
ENSHBUG00000017857	exosc1	98	71.204	ENSEASG00005008684	EXOSC1	98	71.204	Equus_asinus_asinus
ENSHBUG00000017857	exosc1	60	56.034	ENSECAG00000010621	EXOSC1	69	56.034	Equus_caballus
ENSHBUG00000017857	exosc1	98	79.058	ENSEEUG00000005647	EXOSC1	98	79.058	Erinaceus_europaeus
ENSHBUG00000017857	exosc1	96	95.135	ENSELUG00000017369	exosc1	87	91.371	Esox_lucius
ENSHBUG00000017857	exosc1	98	80.628	ENSFCAG00000040563	EXOSC1	92	80.628	Felis_catus
ENSHBUG00000017857	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSHBUG00000017857	exosc1	98	80.628	ENSFDAG00000000846	EXOSC1	98	80.628	Fukomys_damarensis
ENSHBUG00000017857	exosc1	100	88.660	ENSFHEG00000009154	exosc1	100	88.660	Fundulus_heteroclitus
ENSHBUG00000017857	exosc1	100	95.361	ENSGMOG00000008993	exosc1	100	95.361	Gadus_morhua
ENSHBUG00000017857	exosc1	98	65.969	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSHBUG00000017857	exosc1	100	88.660	ENSGAFG00000010265	exosc1	95	88.660	Gambusia_affinis
ENSHBUG00000017857	exosc1	100	93.814	ENSGACG00000018936	exosc1	100	93.814	Gasterosteus_aculeatus
ENSHBUG00000017857	exosc1	98	76.963	ENSGAGG00000019192	EXOSC1	98	76.963	Gopherus_agassizii
ENSHBUG00000017857	exosc1	98	69.110	ENSGGOG00000003099	EXOSC1	98	69.110	Gorilla_gorilla
ENSHBUG00000017857	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSHBUG00000017857	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSHBUG00000017857	exosc1	100	95.876	ENSHCOG00000019882	exosc1	100	95.876	Hippocampus_comes
ENSHBUG00000017857	exosc1	100	91.753	ENSIPUG00000007685	exosc1	100	91.753	Ictalurus_punctatus
ENSHBUG00000017857	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSHBUG00000017857	exosc1	98	79.581	ENSSTOG00000006615	EXOSC1	98	79.581	Ictidomys_tridecemlineatus
ENSHBUG00000017857	exosc1	98	80.105	ENSJJAG00000013311	Exosc1	98	80.105	Jaculus_jaculus
ENSHBUG00000017857	exosc1	100	93.814	ENSKMAG00000001202	exosc1	82	93.814	Kryptolebias_marmoratus
ENSHBUG00000017857	exosc1	100	97.938	ENSLBEG00000011448	exosc1	100	97.938	Labrus_bergylta
ENSHBUG00000017857	exosc1	100	66.000	ENSLOCG00000003776	exosc1	100	66.000	Lepisosteus_oculatus
ENSHBUG00000017857	exosc1	98	80.105	ENSLAFG00000015983	EXOSC1	98	80.105	Loxodonta_africana
ENSHBUG00000017857	exosc1	98	80.105	ENSMFAG00000001493	EXOSC1	98	80.105	Macaca_fascicularis
ENSHBUG00000017857	exosc1	98	80.105	ENSMMUG00000020028	EXOSC1	98	73.333	Macaca_mulatta
ENSHBUG00000017857	exosc1	98	80.105	ENSMNEG00000029816	EXOSC1	98	80.105	Macaca_nemestrina
ENSHBUG00000017857	exosc1	98	74.346	ENSMLEG00000027643	EXOSC1	98	74.346	Mandrillus_leucophaeus
ENSHBUG00000017857	exosc1	100	97.423	ENSMAMG00000012200	exosc1	100	97.423	Mastacembelus_armatus
ENSHBUG00000017857	exosc1	100	100.000	ENSMZEG00005007042	exosc1	100	100.000	Maylandia_zebra
ENSHBUG00000017857	exosc1	98	69.110	ENSMAUG00000020462	-	98	69.110	Mesocricetus_auratus
ENSHBUG00000017857	exosc1	98	80.105	ENSMICG00000007664	EXOSC1	91	80.105	Microcebus_murinus
ENSHBUG00000017857	exosc1	98	74.603	ENSMOCG00000017124	-	96	74.603	Microtus_ochrogaster
ENSHBUG00000017857	exosc1	98	79.058	ENSMOCG00000006004	-	98	79.058	Microtus_ochrogaster
ENSHBUG00000017857	exosc1	100	72.680	ENSMMOG00000021403	exosc1	100	72.680	Mola_mola
ENSHBUG00000017857	exosc1	98	80.208	ENSMODG00000004213	EXOSC1	98	80.208	Monodelphis_domestica
ENSHBUG00000017857	exosc1	96	96.757	ENSMALG00000007061	exosc1	93	96.757	Monopterus_albus
ENSHBUG00000017857	exosc1	98	78.534	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.534	Mus_caroli
ENSHBUG00000017857	exosc1	98	78.534	ENSMUSG00000034321	Exosc1	98	78.534	Mus_musculus
ENSHBUG00000017857	exosc1	98	79.058	MGP_PahariEiJ_G0014449	Exosc1	98	79.058	Mus_pahari
ENSHBUG00000017857	exosc1	98	78.534	MGP_SPRETEiJ_G0023880	Exosc1	98	78.534	Mus_spretus
ENSHBUG00000017857	exosc1	98	80.628	ENSMPUG00000017044	EXOSC1	98	80.628	Mustela_putorius_furo
ENSHBUG00000017857	exosc1	98	80.105	ENSMLUG00000009228	EXOSC1	98	80.105	Myotis_lucifugus
ENSHBUG00000017857	exosc1	98	77.487	ENSNGAG00000022033	Exosc1	98	77.487	Nannospalax_galili
ENSHBUG00000017857	exosc1	100	78.866	ENSNBRG00000024007	exosc1	99	78.866	Neolamprologus_brichardi
ENSHBUG00000017857	exosc1	98	79.581	ENSNLEG00000013872	EXOSC1	98	79.581	Nomascus_leucogenys
ENSHBUG00000017857	exosc1	58	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSHBUG00000017857	exosc1	98	79.058	ENSOPRG00000005065	EXOSC1	98	79.058	Ochotona_princeps
ENSHBUG00000017857	exosc1	98	80.628	ENSODEG00000016709	EXOSC1	98	80.628	Octodon_degus
ENSHBUG00000017857	exosc1	100	98.969	ENSONIG00000017683	exosc1	99	98.969	Oreochromis_niloticus
ENSHBUG00000017857	exosc1	59	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSHBUG00000017857	exosc1	98	74.346	ENSOCUG00000026461	-	98	74.346	Oryctolagus_cuniculus
ENSHBUG00000017857	exosc1	98	78.646	ENSOCUG00000011898	-	98	78.646	Oryctolagus_cuniculus
ENSHBUG00000017857	exosc1	100	90.769	ENSORLG00000011595	exosc1	100	90.769	Oryzias_latipes
ENSHBUG00000017857	exosc1	100	90.769	ENSORLG00020005831	exosc1	100	90.769	Oryzias_latipes_hni
ENSHBUG00000017857	exosc1	100	90.256	ENSORLG00015004317	exosc1	100	90.256	Oryzias_latipes_hsok
ENSHBUG00000017857	exosc1	100	77.320	ENSOMEG00000013907	exosc1	99	77.320	Oryzias_melastigma
ENSHBUG00000017857	exosc1	98	79.581	ENSOGAG00000016259	EXOSC1	98	79.581	Otolemur_garnettii
ENSHBUG00000017857	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSHBUG00000017857	exosc1	98	74.093	ENSPPAG00000039842	EXOSC1	98	74.093	Pan_paniscus
ENSHBUG00000017857	exosc1	98	80.628	ENSPPRG00000023366	EXOSC1	98	80.628	Panthera_pardus
ENSHBUG00000017857	exosc1	98	80.628	ENSPTIG00000017701	EXOSC1	98	80.628	Panthera_tigris_altaica
ENSHBUG00000017857	exosc1	98	80.105	ENSPTRG00000002808	EXOSC1	98	80.105	Pan_troglodytes
ENSHBUG00000017857	exosc1	98	80.105	ENSPANG00000021324	EXOSC1	98	80.105	Papio_anubis
ENSHBUG00000017857	exosc1	100	91.753	ENSPKIG00000016037	exosc1	100	91.753	Paramormyrops_kingsleyae
ENSHBUG00000017857	exosc1	92	66.316	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSHBUG00000017857	exosc1	100	84.021	ENSPMGG00000014002	exosc1	100	84.021	Periophthalmus_magnuspinnatus
ENSHBUG00000017857	exosc1	98	79.058	ENSPEMG00000010710	-	98	79.058	Peromyscus_maniculatus_bairdii
ENSHBUG00000017857	exosc1	96	71.351	ENSPMAG00000000195	exosc1	95	71.505	Petromyzon_marinus
ENSHBUG00000017857	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSHBUG00000017857	exosc1	100	88.144	ENSPFOG00000006755	exosc1	95	88.144	Poecilia_formosa
ENSHBUG00000017857	exosc1	100	88.144	ENSPLAG00000005880	exosc1	100	88.144	Poecilia_latipinna
ENSHBUG00000017857	exosc1	100	88.144	ENSPMEG00000015598	exosc1	95	88.144	Poecilia_mexicana
ENSHBUG00000017857	exosc1	100	76.289	ENSPREG00000000405	exosc1	94	76.289	Poecilia_reticulata
ENSHBUG00000017857	exosc1	98	80.105	ENSPPYG00000002531	EXOSC1	98	80.105	Pongo_abelii
ENSHBUG00000017857	exosc1	98	79.058	ENSPCAG00000009135	EXOSC1	98	79.058	Procavia_capensis
ENSHBUG00000017857	exosc1	98	73.822	ENSPCOG00000027539	EXOSC1	98	73.822	Propithecus_coquereli
ENSHBUG00000017857	exosc1	98	80.105	ENSPVAG00000003372	EXOSC1	98	80.105	Pteropus_vampyrus
ENSHBUG00000017857	exosc1	100	100.000	ENSPNYG00000021745	exosc1	100	100.000	Pundamilia_nyererei
ENSHBUG00000017857	exosc1	100	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSHBUG00000017857	exosc1	98	79.058	ENSRNOG00000048708	Exosc1	98	79.058	Rattus_norvegicus
ENSHBUG00000017857	exosc1	98	80.105	ENSRBIG00000035618	EXOSC1	98	80.105	Rhinopithecus_bieti
ENSHBUG00000017857	exosc1	98	80.105	ENSRROG00000032589	EXOSC1	91	80.105	Rhinopithecus_roxellana
ENSHBUG00000017857	exosc1	65	38.125	YNL232W	CSL4	54	38.125	Saccharomyces_cerevisiae
ENSHBUG00000017857	exosc1	98	80.105	ENSSBOG00000000359	EXOSC1	98	80.105	Saimiri_boliviensis_boliviensis
ENSHBUG00000017857	exosc1	76	89.041	ENSSHAG00000018219	EXOSC1	99	89.041	Sarcophilus_harrisii
ENSHBUG00000017857	exosc1	100	90.206	ENSSFOG00015016289	-	100	90.206	Scleropages_formosus
ENSHBUG00000017857	exosc1	100	91.753	ENSSFOG00015009069	exosc1	100	91.753	Scleropages_formosus
ENSHBUG00000017857	exosc1	100	97.938	ENSSMAG00000003721	exosc1	100	97.938	Scophthalmus_maximus
ENSHBUG00000017857	exosc1	100	97.423	ENSSDUG00000002993	exosc1	100	97.423	Seriola_dumerili
ENSHBUG00000017857	exosc1	100	97.423	ENSSLDG00000025181	exosc1	100	97.423	Seriola_lalandi_dorsalis
ENSHBUG00000017857	exosc1	98	68.586	ENSSARG00000000162	EXOSC1	98	68.586	Sorex_araneus
ENSHBUG00000017857	exosc1	98	74.346	ENSSPUG00000012263	EXOSC1	98	74.346	Sphenodon_punctatus
ENSHBUG00000017857	exosc1	100	89.175	ENSSPAG00000016792	exosc1	83	89.175	Stegastes_partitus
ENSHBUG00000017857	exosc1	98	79.581	ENSSSCG00000010518	EXOSC1	89	79.581	Sus_scrofa
ENSHBUG00000017857	exosc1	99	76.963	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSHBUG00000017857	exosc1	98	84.211	ENSTRUG00000007706	exosc1	98	84.211	Takifugu_rubripes
ENSHBUG00000017857	exosc1	98	83.938	ENSTNIG00000014079	exosc1	97	83.938	Tetraodon_nigroviridis
ENSHBUG00000017857	exosc1	98	73.822	ENSTBEG00000006011	EXOSC1	98	73.822	Tupaia_belangeri
ENSHBUG00000017857	exosc1	95	81.967	ENSTTRG00000009887	EXOSC1	99	81.967	Tursiops_truncatus
ENSHBUG00000017857	exosc1	98	64.398	ENSUAMG00000010266	EXOSC1	98	64.398	Ursus_americanus
ENSHBUG00000017857	exosc1	98	64.398	ENSUMAG00000022002	EXOSC1	98	64.398	Ursus_maritimus
ENSHBUG00000017857	exosc1	98	80.105	ENSVVUG00000023192	EXOSC1	62	80.105	Vulpes_vulpes
ENSHBUG00000017857	exosc1	99	76.684	ENSXETG00000003434	exosc1	99	76.684	Xenopus_tropicalis
ENSHBUG00000017857	exosc1	63	90.083	ENSXCOG00000014499	exosc1	93	90.083	Xiphophorus_couchianus
ENSHBUG00000017857	exosc1	100	76.804	ENSXMAG00000023382	exosc1	94	76.804	Xiphophorus_maculatus