EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017904 (Gene tree)
Gene ID: 102289623
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12692 bases
Position: chrJH425460.1:380969-393660
Accession: 102289623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015959	AARP2CN	PF08142.12	1.4e-20	1	1
ENSHBUP00000031923	AARP2CN	PF08142.12	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024357	-	4144	-	ENSHBUP00000015959	771 (aa)	-	-
ENSHBUT00000024376	-	3558	XM_005932006	ENSHBUP00000031923	831 (aa)	XP_005932068	UPI0003BCF173

Gene Model

Click here to download ENSHBUG00000017904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017904	tsr1	99	55.943	ENSG00000167721	TSR1	98	55.353	Homo_sapiens
ENSHBUG00000017904	tsr1	100	88.062	ENSAPOG00000020891	tsr1	100	89.115	Acanthochromis_polyacanthus
ENSHBUG00000017904	tsr1	100	55.032	ENSAMEG00000007599	TSR1	99	54.177	Ailuropoda_melanoleuca
ENSHBUG00000017904	tsr1	100	89.922	ENSACIG00000007090	tsr1	100	90.253	Amphilophus_citrinellus
ENSHBUG00000017904	tsr1	100	87.355	ENSAOCG00000023284	tsr1	100	88.582	Amphiprion_ocellaris
ENSHBUG00000017904	tsr1	100	87.484	ENSAPEG00000008452	tsr1	100	88.258	Amphiprion_percula
ENSHBUG00000017904	tsr1	100	85.531	ENSATEG00000021961	tsr1	100	87.232	Anabas_testudineus
ENSHBUG00000017904	tsr1	97	58.508	ENSAPLG00000013422	TSR1	100	58.877	Anas_platyrhynchos
ENSHBUG00000017904	tsr1	74	51.557	ENSACAG00000000859	TSR1	92	50.166	Anolis_carolinensis
ENSHBUG00000017904	tsr1	99	55.512	ENSANAG00000031071	TSR1	98	55.800	Aotus_nancymaae
ENSHBUG00000017904	tsr1	100	99.519	ENSACLG00000007595	tsr1	100	99.519	Astatotilapia_calliptera
ENSHBUG00000017904	tsr1	50	75.656	ENSAMXG00000008470	tsr1	90	75.294	Astyanax_mexicanus
ENSHBUG00000017904	tsr1	100	56.561	ENSBTAG00000004225	TSR1	99	55.769	Bos_taurus
ENSHBUG00000017904	tsr1	97	38.371	WBGene00006497	tag-151	96	38.943	Caenorhabditis_elegans
ENSHBUG00000017904	tsr1	98	54.793	ENSCJAG00000012456	TSR1	98	55.122	Callithrix_jacchus
ENSHBUG00000017904	tsr1	100	55.811	ENSCAFG00000002106	-	99	55.078	Canis_familiaris
ENSHBUG00000017904	tsr1	87	57.038	ENSCAFG00000019273	-	100	56.729	Canis_familiaris
ENSHBUG00000017904	tsr1	100	55.811	ENSCAFG00020009728	TSR1	99	54.958	Canis_lupus_dingo
ENSHBUG00000017904	tsr1	100	57.308	ENSCHIG00000023935	TSR1	99	56.182	Capra_hircus
ENSHBUG00000017904	tsr1	100	56.010	ENSTSYG00000005468	TSR1	99	55.769	Carlito_syrichta
ENSHBUG00000017904	tsr1	92	56.111	ENSCPOG00000014833	TSR1	99	55.123	Cavia_porcellus
ENSHBUG00000017904	tsr1	92	53.867	ENSCCAG00000028962	TSR1	98	54.275	Cebus_capucinus
ENSHBUG00000017904	tsr1	99	55.284	ENSCATG00000044262	TSR1	99	55.583	Cercocebus_atys
ENSHBUG00000017904	tsr1	100	55.882	ENSCLAG00000005567	TSR1	99	55.928	Chinchilla_lanigera
ENSHBUG00000017904	tsr1	99	55.412	ENSCSAG00000013788	TSR1	99	55.704	Chlorocebus_sabaeus
ENSHBUG00000017904	tsr1	99	56.923	ENSCPBG00000020363	TSR1	97	55.702	Chrysemys_picta_bellii
ENSHBUG00000017904	tsr1	97	43.734	ENSCING00000020658	-	99	43.788	Ciona_intestinalis
ENSHBUG00000017904	tsr1	97	43.194	ENSCSAVG00000001875	-	100	43.857	Ciona_savignyi
ENSHBUG00000017904	tsr1	99	48.837	ENSCANG00000033056	TSR1	96	69.360	Colobus_angolensis_palliatus
ENSHBUG00000017904	tsr1	100	54.731	ENSCGRG00001023942	Tsr1	99	54.251	Cricetulus_griseus_chok1gshd
ENSHBUG00000017904	tsr1	100	80.000	ENSCSEG00000013009	tsr1	100	81.250	Cynoglossus_semilaevis
ENSHBUG00000017904	tsr1	100	84.496	ENSCVAG00000000506	tsr1	100	84.477	Cyprinodon_variegatus
ENSHBUG00000017904	tsr1	99	75.226	ENSDARG00000007744	tsr1	100	75.653	Danio_rerio
ENSHBUG00000017904	tsr1	100	57.344	ENSDNOG00000004715	TSR1	99	57.606	Dasypus_novemcinctus
ENSHBUG00000017904	tsr1	97	50.267	ENSDORG00000023234	-	99	48.436	Dipodomys_ordii
ENSHBUG00000017904	tsr1	100	56.138	ENSDORG00000016371	-	99	54.622	Dipodomys_ordii
ENSHBUG00000017904	tsr1	97	44.152	FBgn0037073	Tsr1	96	44.363	Drosophila_melanogaster
ENSHBUG00000017904	tsr1	89	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSHBUG00000017904	tsr1	99	52.057	ENSEBUG00000013731	TSR1	98	50.563	Eptatretus_burgeri
ENSHBUG00000017904	tsr1	100	56.688	ENSEASG00005009302	TSR1	97	55.875	Equus_asinus_asinus
ENSHBUG00000017904	tsr1	100	56.667	ENSECAG00000009114	TSR1	99	55.850	Equus_caballus
ENSHBUG00000017904	tsr1	100	75.747	ENSELUG00000020984	tsr1	96	75.747	Esox_lucius
ENSHBUG00000017904	tsr1	100	55.740	ENSFCAG00000006313	TSR1	99	55.024	Felis_catus
ENSHBUG00000017904	tsr1	100	59.564	ENSFALG00000006532	TSR1	99	57.416	Ficedula_albicollis
ENSHBUG00000017904	tsr1	100	56.082	ENSFDAG00000006038	TSR1	99	55.247	Fukomys_damarensis
ENSHBUG00000017904	tsr1	100	83.552	ENSFHEG00000003626	tsr1	100	83.909	Fundulus_heteroclitus
ENSHBUG00000017904	tsr1	100	72.494	ENSGMOG00000010336	tsr1	100	73.293	Gadus_morhua
ENSHBUG00000017904	tsr1	100	84.569	ENSGAFG00000012993	tsr1	100	83.254	Gambusia_affinis
ENSHBUG00000017904	tsr1	100	81.178	ENSGACG00000010843	tsr1	100	81.384	Gasterosteus_aculeatus
ENSHBUG00000017904	tsr1	99	56.795	ENSGAGG00000025619	-	99	54.808	Gopherus_agassizii
ENSHBUG00000017904	tsr1	99	56.202	ENSGGOG00000001704	TSR1	98	55.839	Gorilla_gorilla
ENSHBUG00000017904	tsr1	100	56.688	ENSHGLG00000012806	-	99	56.303	Heterocephalus_glaber_female
ENSHBUG00000017904	tsr1	100	49.743	ENSHGLG00000015688	-	98	49.064	Heterocephalus_glaber_female
ENSHBUG00000017904	tsr1	100	56.688	ENSHGLG00100015392	TSR1	99	56.303	Heterocephalus_glaber_male
ENSHBUG00000017904	tsr1	100	80.103	ENSHCOG00000001432	tsr1	100	80.626	Hippocampus_comes
ENSHBUG00000017904	tsr1	100	74.487	ENSIPUG00000004618	tsr1	100	74.671	Ictalurus_punctatus
ENSHBUG00000017904	tsr1	100	56.943	ENSSTOG00000011819	TSR1	99	56.818	Ictidomys_tridecemlineatus
ENSHBUG00000017904	tsr1	98	53.585	ENSJJAG00000019505	Tsr1	95	52.412	Jaculus_jaculus
ENSHBUG00000017904	tsr1	100	84.091	ENSKMAG00000005763	tsr1	100	84.928	Kryptolebias_marmoratus
ENSHBUG00000017904	tsr1	100	85.561	ENSLBEG00000021823	tsr1	100	86.038	Labrus_bergylta
ENSHBUG00000017904	tsr1	100	57.468	ENSLACG00000002197	TSR1	100	56.671	Latimeria_chalumnae
ENSHBUG00000017904	tsr1	99	56.527	ENSLOCG00000006491	TSR1	99	56.615	Lepisosteus_oculatus
ENSHBUG00000017904	tsr1	100	55.159	ENSMFAG00000021330	TSR1	99	55.825	Macaca_fascicularis
ENSHBUG00000017904	tsr1	100	55.032	ENSMMUG00000017519	TSR1	99	55.704	Macaca_mulatta
ENSHBUG00000017904	tsr1	100	55.159	ENSMNEG00000031382	TSR1	99	55.825	Macaca_nemestrina
ENSHBUG00000017904	tsr1	99	55.155	ENSMLEG00000036733	TSR1	99	55.461	Mandrillus_leucophaeus
ENSHBUG00000017904	tsr1	100	85.036	ENSMAMG00000017918	tsr1	100	85.629	Mastacembelus_armatus
ENSHBUG00000017904	tsr1	100	98.196	ENSMZEG00005007477	tsr1	100	98.319	Maylandia_zebra
ENSHBUG00000017904	tsr1	100	58.515	ENSMGAG00000005576	TSR1	100	55.948	Meleagris_gallopavo
ENSHBUG00000017904	tsr1	100	56.923	ENSMICG00000012943	TSR1	99	55.957	Microcebus_murinus
ENSHBUG00000017904	tsr1	100	55.939	ENSMOCG00000022764	Tsr1	99	54.392	Microtus_ochrogaster
ENSHBUG00000017904	tsr1	100	84.903	ENSMMOG00000014280	tsr1	100	85.817	Mola_mola
ENSHBUG00000017904	tsr1	100	56.274	ENSMODG00000010658	TSR1	99	56.205	Monodelphis_domestica
ENSHBUG00000017904	tsr1	100	87.259	ENSMALG00000011681	tsr1	100	87.530	Monopterus_albus
ENSHBUG00000017904	tsr1	100	55.243	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.371	Mus_caroli
ENSHBUG00000017904	tsr1	100	56.138	ENSMUSG00000038335	Tsr1	99	55.210	Mus_musculus
ENSHBUG00000017904	tsr1	100	56.650	MGP_PahariEiJ_G0017864	Tsr1	99	55.329	Mus_pahari
ENSHBUG00000017904	tsr1	100	56.138	MGP_SPRETEiJ_G0017570	Tsr1	99	55.210	Mus_spretus
ENSHBUG00000017904	tsr1	87	58.333	ENSMPUG00000013000	TSR1	100	58.055	Mustela_putorius_furo
ENSHBUG00000017904	tsr1	100	56.138	ENSMLUG00000003505	TSR1	99	56.062	Myotis_lucifugus
ENSHBUG00000017904	tsr1	100	98.323	ENSNBRG00000020728	tsr1	100	98.323	Neolamprologus_brichardi
ENSHBUG00000017904	tsr1	99	49.870	ENSNLEG00000017184	TSR1	94	67.160	Nomascus_leucogenys
ENSHBUG00000017904	tsr1	98	54.215	ENSMEUG00000015828	TSR1	99	52.500	Notamacropus_eugenii
ENSHBUG00000017904	tsr1	100	93.655	ENSONIG00000013131	tsr1	100	94.320	Oreochromis_niloticus
ENSHBUG00000017904	tsr1	100	56.266	ENSOCUG00000014256	TSR1	99	55.342	Oryctolagus_cuniculus
ENSHBUG00000017904	tsr1	100	85.646	ENSORLG00000004926	tsr1	100	85.646	Oryzias_latipes
ENSHBUG00000017904	tsr1	100	85.526	ENSORLG00020008792	tsr1	100	85.407	Oryzias_latipes_hni
ENSHBUG00000017904	tsr1	100	85.766	ENSORLG00015013838	tsr1	100	85.766	Oryzias_latipes_hsok
ENSHBUG00000017904	tsr1	100	85.851	ENSOMEG00000004830	tsr1	100	86.091	Oryzias_melastigma
ENSHBUG00000017904	tsr1	100	54.672	ENSOGAG00000004492	TSR1	99	54.643	Otolemur_garnettii
ENSHBUG00000017904	tsr1	100	57.289	ENSOARG00000015437	TSR1	97	56.303	Ovis_aries
ENSHBUG00000017904	tsr1	99	55.943	ENSPPAG00000036355	TSR1	98	55.353	Pan_paniscus
ENSHBUG00000017904	tsr1	100	55.357	ENSPPRG00000015519	-	99	54.545	Panthera_pardus
ENSHBUG00000017904	tsr1	100	55.485	ENSPTIG00000010608	TSR1	99	54.665	Panthera_tigris_altaica
ENSHBUG00000017904	tsr1	99	55.943	ENSPTRG00000008547	TSR1	98	55.353	Pan_troglodytes
ENSHBUG00000017904	tsr1	99	52.516	ENSPANG00000024463	TSR1	99	53.463	Papio_anubis
ENSHBUG00000017904	tsr1	100	72.716	ENSPKIG00000013972	tsr1	100	73.141	Paramormyrops_kingsleyae
ENSHBUG00000017904	tsr1	94	56.731	ENSPSIG00000018258	TSR1	99	55.586	Pelodiscus_sinensis
ENSHBUG00000017904	tsr1	99	81.884	ENSPMGG00000011577	tsr1	99	81.763	Periophthalmus_magnuspinnatus
ENSHBUG00000017904	tsr1	100	55.115	ENSPEMG00000018033	Tsr1	99	53.892	Peromyscus_maniculatus_bairdii
ENSHBUG00000017904	tsr1	100	56.747	ENSPCIG00000009357	TSR1	97	55.991	Phascolarctos_cinereus
ENSHBUG00000017904	tsr1	100	82.625	ENSPFOG00000004483	TSR1	100	84.053	Poecilia_formosa
ENSHBUG00000017904	tsr1	100	83.433	ENSPLAG00000022320	tsr1	100	84.744	Poecilia_latipinna
ENSHBUG00000017904	tsr1	100	83.552	ENSPMEG00000004577	tsr1	100	84.863	Poecilia_mexicana
ENSHBUG00000017904	tsr1	97	84.540	ENSPREG00000010354	tsr1	96	84.436	Poecilia_reticulata
ENSHBUG00000017904	tsr1	98	51.097	ENSPPYG00000007792	TSR1	98	51.090	Pongo_abelii
ENSHBUG00000017904	tsr1	51	62.791	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSHBUG00000017904	tsr1	100	56.410	ENSPCOG00000017928	TSR1	99	55.850	Propithecus_coquereli
ENSHBUG00000017904	tsr1	100	55.969	ENSPVAG00000002162	TSR1	99	55.168	Pteropus_vampyrus
ENSHBUG00000017904	tsr1	100	99.519	ENSPNYG00000016163	tsr1	100	99.519	Pundamilia_nyererei
ENSHBUG00000017904	tsr1	100	75.448	ENSPNAG00000008659	tsr1	100	75.595	Pygocentrus_nattereri
ENSHBUG00000017904	tsr1	100	55.882	ENSRNOG00000002980	Tsr1	99	54.556	Rattus_norvegicus
ENSHBUG00000017904	tsr1	100	55.414	ENSRBIG00000040016	TSR1	99	55.144	Rhinopithecus_bieti
ENSHBUG00000017904	tsr1	100	55.159	ENSRROG00000030361	TSR1	99	54.904	Rhinopithecus_roxellana
ENSHBUG00000017904	tsr1	99	55.943	ENSSBOG00000020785	TSR1	98	55.704	Saimiri_boliviensis_boliviensis
ENSHBUG00000017904	tsr1	100	56.633	ENSSHAG00000011394	TSR1	99	56.318	Sarcophilus_harrisii
ENSHBUG00000017904	tsr1	99	75.875	ENSSFOG00015005455	tsr1	100	75.271	Scleropages_formosus
ENSHBUG00000017904	tsr1	100	85.328	ENSSMAG00000009504	tsr1	100	86.331	Scophthalmus_maximus
ENSHBUG00000017904	tsr1	100	88.439	ENSSDUG00000012074	tsr1	100	89.273	Seriola_dumerili
ENSHBUG00000017904	tsr1	100	88.411	ENSSLDG00000002031	tsr1	100	89.128	Seriola_lalandi_dorsalis
ENSHBUG00000017904	tsr1	93	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSHBUG00000017904	tsr1	99	58.471	ENSSPUG00000007042	TSR1	99	58.223	Sphenodon_punctatus
ENSHBUG00000017904	tsr1	100	86.684	ENSSPAG00000021951	tsr1	100	88.439	Stegastes_partitus
ENSHBUG00000017904	tsr1	100	57.325	ENSSSCG00000038534	TSR1	99	55.981	Sus_scrofa
ENSHBUG00000017904	tsr1	96	60.000	ENSTGUG00000005883	TSR1	100	58.411	Taeniopygia_guttata
ENSHBUG00000017904	tsr1	100	82.065	ENSTRUG00000004665	tsr1	100	82.374	Takifugu_rubripes
ENSHBUG00000017904	tsr1	100	81.677	ENSTNIG00000016196	tsr1	100	82.992	Tetraodon_nigroviridis
ENSHBUG00000017904	tsr1	66	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSHBUG00000017904	tsr1	100	57.289	ENSTTRG00000001177	TSR1	99	56.235	Tursiops_truncatus
ENSHBUG00000017904	tsr1	100	55.499	ENSUAMG00000025160	TSR1	99	54.731	Ursus_americanus
ENSHBUG00000017904	tsr1	100	53.758	ENSUMAG00000009294	TSR1	98	54.691	Ursus_maritimus
ENSHBUG00000017904	tsr1	83	51.070	ENSVPAG00000000228	TSR1	99	50.213	Vicugna_pacos
ENSHBUG00000017904	tsr1	100	55.811	ENSVVUG00000021767	TSR1	99	55.078	Vulpes_vulpes
ENSHBUG00000017904	tsr1	100	52.097	ENSXETG00000023797	tsr1	100	52.476	Xenopus_tropicalis
ENSHBUG00000017904	tsr1	100	83.097	ENSXCOG00000009635	tsr1	100	82.953	Xiphophorus_couchianus
ENSHBUG00000017904	tsr1	100	83.871	ENSXMAG00000001397	tsr1	97	84.192	Xiphophorus_maculatus