EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000017947 (Gene tree)
Gene ID: 102289125
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 20726 bases
Position: chrJH425473.1:115098-135823
Accession: 102289125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000015894	ResIII	PF04851.15	1e-06	1	1
ENSHBUP00000015851	ResIII	PF04851.15	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000033979	-	5097	-	ENSHBUP00000015851	1698 (aa)	-	-
ENSHBUT00000024274	-	7072	XM_005933025	ENSHBUP00000015894	1811 (aa)	XP_005933087	UPI0003BC58AA

Gene Model

Click here to download ENSHBUG00000017947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000017947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000017947	chd2	100	71.651	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSHBUG00000017947	chd2	100	94.502	ENSAPOG00000008913	chd2	100	94.338	Acanthochromis_polyacanthus
ENSHBUG00000017947	chd2	60	80.638	ENSAMEG00000010805	-	93	76.965	Ailuropoda_melanoleuca
ENSHBUG00000017947	chd2	100	90.969	ENSAOCG00000016332	chd2	100	90.914	Amphiprion_ocellaris
ENSHBUG00000017947	chd2	100	94.383	ENSAPEG00000016676	chd2	100	94.328	Amphiprion_percula
ENSHBUG00000017947	chd2	98	95.294	ENSATEG00000005246	chd2	100	93.132	Anabas_testudineus
ENSHBUG00000017947	chd2	100	71.675	ENSAPLG00000011141	-	100	71.944	Anas_platyrhynchos
ENSHBUG00000017947	chd2	98	69.319	ENSACAG00000000088	-	96	69.575	Anolis_carolinensis
ENSHBUG00000017947	chd2	100	71.529	ENSANAG00000024017	-	96	72.656	Aotus_nancymaae
ENSHBUG00000017947	chd2	100	99.823	ENSACLG00000021370	chd2	100	99.823	Astatotilapia_calliptera
ENSHBUG00000017947	chd2	100	71.313	ENSCJAG00000020444	-	96	72.431	Callithrix_jacchus
ENSHBUG00000017947	chd2	99	72.361	ENSCAFG00000010998	CHD2	95	75.927	Canis_familiaris
ENSHBUG00000017947	chd2	99	71.234	ENSCHIG00000022261	-	96	71.838	Capra_hircus
ENSHBUG00000017947	chd2	100	72.067	ENSTSYG00000003272	-	95	74.294	Carlito_syrichta
ENSHBUG00000017947	chd2	93	74.405	ENSCPOG00000005800	-	95	76.795	Cavia_porcellus
ENSHBUG00000017947	chd2	100	71.582	ENSCCAG00000035304	-	96	72.712	Cebus_capucinus
ENSHBUG00000017947	chd2	100	71.544	ENSCATG00000031069	-	96	72.783	Cercocebus_atys
ENSHBUG00000017947	chd2	100	71.329	ENSCLAG00000016269	-	96	72.391	Chinchilla_lanigera
ENSHBUG00000017947	chd2	100	71.598	ENSCSAG00000017007	-	96	72.840	Chlorocebus_sabaeus
ENSHBUG00000017947	chd2	73	80.231	ENSCHOG00000000608	-	75	81.084	Choloepus_hoffmanni
ENSHBUG00000017947	chd2	84	77.093	ENSCPBG00000018049	-	95	81.604	Chrysemys_picta_bellii
ENSHBUG00000017947	chd2	77	52.457	ENSCSAVG00000007580	-	94	58.125	Ciona_savignyi
ENSHBUG00000017947	chd2	100	71.544	ENSCANG00000038126	-	96	72.783	Colobus_angolensis_palliatus
ENSHBUG00000017947	chd2	100	72.121	ENSCGRG00001006649	Chd2	96	72.712	Cricetulus_griseus_chok1gshd
ENSHBUG00000017947	chd2	100	72.121	ENSCGRG00000018154	Chd2	96	72.712	Cricetulus_griseus_crigri
ENSHBUG00000017947	chd2	100	77.690	ENSCSEG00000003646	chd2	95	96.512	Cynoglossus_semilaevis
ENSHBUG00000017947	chd2	98	92.941	ENSCVAG00000002427	chd2	100	81.893	Cyprinodon_variegatus
ENSHBUG00000017947	chd2	100	81.496	ENSDARG00000060687	chd2	100	83.256	Danio_rerio
ENSHBUG00000017947	chd2	99	71.867	ENSDNOG00000009796	-	96	72.911	Dasypus_novemcinctus
ENSHBUG00000017947	chd2	54	75.532	ENSEBUG00000014994	chd2	79	76.087	Eptatretus_burgeri
ENSHBUG00000017947	chd2	99	72.431	ENSEASG00005015526	-	97	77.980	Equus_asinus_asinus
ENSHBUG00000017947	chd2	95	100.000	ENSELUG00000017981	chd2	97	96.667	Esox_lucius
ENSHBUG00000017947	chd2	96	72.916	ENSFALG00000010369	-	100	72.527	Ficedula_albicollis
ENSHBUG00000017947	chd2	100	71.329	ENSFDAG00000020651	-	96	72.559	Fukomys_damarensis
ENSHBUG00000017947	chd2	94	90.000	ENSFHEG00000002119	chd2	100	90.000	Fundulus_heteroclitus
ENSHBUG00000017947	chd2	95	83.701	ENSGMOG00000002890	chd2	99	83.759	Gadus_morhua
ENSHBUG00000017947	chd2	100	71.805	ENSGALG00000006949	CHD2	93	79.592	Gallus_gallus
ENSHBUG00000017947	chd2	96	88.930	ENSGAFG00000001905	chd2	98	89.899	Gambusia_affinis
ENSHBUG00000017947	chd2	95	89.651	ENSGACG00000013246	chd2	99	90.000	Gasterosteus_aculeatus
ENSHBUG00000017947	chd2	84	78.860	ENSGAGG00000013176	-	98	82.024	Gopherus_agassizii
ENSHBUG00000017947	chd2	100	70.614	ENSGGOG00000015677	CHD2	96	71.814	Gorilla_gorilla
ENSHBUG00000017947	chd2	100	71.382	ENSHGLG00000004435	CHD2	96	72.559	Heterocephalus_glaber_female
ENSHBUG00000017947	chd2	100	71.006	ENSHGLG00100016376	-	96	72.166	Heterocephalus_glaber_male
ENSHBUG00000017947	chd2	99	80.058	ENSHCOG00000008855	chd2	94	83.291	Hippocampus_comes
ENSHBUG00000017947	chd2	99	78.805	ENSIPUG00000000488	chd2	98	79.683	Ictalurus_punctatus
ENSHBUG00000017947	chd2	100	72.136	ENSSTOG00000001270	-	96	72.896	Ictidomys_tridecemlineatus
ENSHBUG00000017947	chd2	100	71.582	ENSJJAG00000000213	Chd2	96	72.824	Jaculus_jaculus
ENSHBUG00000017947	chd2	85	87.307	ENSKMAG00000015849	chd2	99	89.484	Kryptolebias_marmoratus
ENSHBUG00000017947	chd2	73	76.395	ENSLAFG00000016885	-	98	81.555	Loxodonta_africana
ENSHBUG00000017947	chd2	100	71.598	ENSMFAG00000033343	-	96	72.840	Macaca_fascicularis
ENSHBUG00000017947	chd2	100	71.598	ENSMMUG00000011782	-	96	72.840	Macaca_mulatta
ENSHBUG00000017947	chd2	100	71.359	ENSMNEG00000036875	-	96	72.590	Macaca_nemestrina
ENSHBUG00000017947	chd2	100	71.598	ENSMLEG00000035026	-	96	72.840	Mandrillus_leucophaeus
ENSHBUG00000017947	chd2	100	93.341	ENSMAMG00000009082	chd2	100	93.286	Mastacembelus_armatus
ENSHBUG00000017947	chd2	100	99.823	ENSMZEG00005021333	chd2	99	99.823	Maylandia_zebra
ENSHBUG00000017947	chd2	99	72.080	ENSMGAG00000008966	-	94	79.592	Meleagris_gallopavo
ENSHBUG00000017947	chd2	99	71.491	ENSMICG00000000332	-	96	72.038	Microcebus_murinus
ENSHBUG00000017947	chd2	100	72.082	ENSMOCG00000015124	Chd2	96	72.896	Microtus_ochrogaster
ENSHBUG00000017947	chd2	100	72.849	ENSMODG00000013158	-	100	73.137	Monodelphis_domestica
ENSHBUG00000017947	chd2	98	89.610	ENSMALG00000007755	chd2	96	96.512	Monopterus_albus
ENSHBUG00000017947	chd2	100	72.183	MGP_CAROLIEiJ_G0029860	Chd2	96	72.835	Mus_caroli
ENSHBUG00000017947	chd2	100	71.959	ENSMUSG00000078671	Chd2	96	72.768	Mus_musculus
ENSHBUG00000017947	chd2	100	71.998	MGP_PahariEiJ_G0013082	Chd2	96	72.640	Mus_pahari
ENSHBUG00000017947	chd2	100	72.067	MGP_SPRETEiJ_G0030962	Chd2	100	71.820	Mus_spretus
ENSHBUG00000017947	chd2	100	72.067	ENSMPUG00000017577	-	96	72.824	Mustela_putorius_furo
ENSHBUG00000017947	chd2	100	71.368	ENSMLUG00000009292	-	96	72.479	Myotis_lucifugus
ENSHBUG00000017947	chd2	100	72.174	ENSNGAG00000010792	Chd2	96	72.824	Nannospalax_galili
ENSHBUG00000017947	chd2	100	95.897	ENSNBRG00000020591	chd2	100	96.249	Neolamprologus_brichardi
ENSHBUG00000017947	chd2	100	69.661	ENSNLEG00000012349	-	95	72.236	Nomascus_leucogenys
ENSHBUG00000017947	chd2	71	77.500	ENSMEUG00000001522	-	72	77.500	Notamacropus_eugenii
ENSHBUG00000017947	chd2	100	70.950	ENSODEG00000016028	-	96	71.942	Octodon_degus
ENSHBUG00000017947	chd2	100	99.393	ENSONIG00000015136	chd2	100	99.393	Oreochromis_niloticus
ENSHBUG00000017947	chd2	89	70.148	ENSOANG00000004385	-	99	69.872	Ornithorhynchus_anatinus
ENSHBUG00000017947	chd2	100	66.613	ENSOCUG00000001628	-	93	77.858	Oryctolagus_cuniculus
ENSHBUG00000017947	chd2	98	95.294	ENSORLG00000008403	chd2	100	89.109	Oryzias_latipes
ENSHBUG00000017947	chd2	98	95.181	ENSORLG00020004138	chd2	100	89.317	Oryzias_latipes_hni
ENSHBUG00000017947	chd2	98	95.349	ENSOMEG00000005831	chd2	100	80.044	Oryzias_melastigma
ENSHBUG00000017947	chd2	100	69.769	ENSOGAG00000010399	-	96	70.763	Otolemur_garnettii
ENSHBUG00000017947	chd2	100	71.336	ENSOARG00000010343	-	98	73.091	Ovis_aries
ENSHBUG00000017947	chd2	100	70.943	ENSPPAG00000030381	-	96	71.710	Pan_paniscus
ENSHBUG00000017947	chd2	100	71.598	ENSPTRG00000007478	CHD2	96	72.840	Pan_troglodytes
ENSHBUG00000017947	chd2	100	68.962	ENSPANG00000033355	-	96	70.090	Papio_anubis
ENSHBUG00000017947	chd2	100	82.147	ENSPKIG00000000495	chd2	100	83.023	Paramormyrops_kingsleyae
ENSHBUG00000017947	chd2	86	81.962	ENSPMGG00000009941	chd2	99	83.716	Periophthalmus_magnuspinnatus
ENSHBUG00000017947	chd2	100	72.013	ENSPEMG00000019507	Chd2	96	72.656	Peromyscus_maniculatus_bairdii
ENSHBUG00000017947	chd2	91	74.660	ENSPCIG00000009417	-	99	77.161	Phascolarctos_cinereus
ENSHBUG00000017947	chd2	100	91.400	ENSPFOG00000007050	chd2	100	91.841	Poecilia_formosa
ENSHBUG00000017947	chd2	100	91.621	ENSPLAG00000005067	chd2	100	91.896	Poecilia_latipinna
ENSHBUG00000017947	chd2	100	91.510	ENSPMEG00000019628	chd2	100	91.951	Poecilia_mexicana
ENSHBUG00000017947	chd2	100	70.360	ENSPPYG00000006799	-	96	71.549	Pongo_abelii
ENSHBUG00000017947	chd2	100	71.813	ENSPCOG00000028084	-	96	72.615	Propithecus_coquereli
ENSHBUG00000017947	chd2	100	99.764	ENSPNYG00000010273	chd2	99	99.764	Pundamilia_nyererei
ENSHBUG00000017947	chd2	99	78.288	ENSPNAG00000016719	chd2	96	76.716	Pygocentrus_nattereri
ENSHBUG00000017947	chd2	100	72.174	ENSRNOG00000012716	Chd2	96	72.824	Rattus_norvegicus
ENSHBUG00000017947	chd2	100	70.075	ENSRBIG00000036875	-	96	71.196	Rhinopithecus_bieti
ENSHBUG00000017947	chd2	100	71.598	ENSRROG00000041087	-	96	72.952	Rhinopithecus_roxellana
ENSHBUG00000017947	chd2	100	71.529	ENSSBOG00000023754	-	96	72.656	Saimiri_boliviensis_boliviensis
ENSHBUG00000017947	chd2	100	72.903	ENSSHAG00000012513	-	100	73.083	Sarcophilus_harrisii
ENSHBUG00000017947	chd2	100	83.160	ENSSFOG00015023759	chd2	100	82.996	Scleropages_formosus
ENSHBUG00000017947	chd2	100	91.919	ENSSMAG00000001726	chd2	100	91.809	Scophthalmus_maximus
ENSHBUG00000017947	chd2	98	90.914	ENSSLDG00000001146	chd2	98	97.674	Seriola_lalandi_dorsalis
ENSHBUG00000017947	chd2	76	80.000	ENSSARG00000014112	-	75	80.000	Sorex_araneus
ENSHBUG00000017947	chd2	100	68.687	ENSSPUG00000011266	-	94	79.592	Sphenodon_punctatus
ENSHBUG00000017947	chd2	98	91.977	ENSSPAG00000016452	chd2	99	91.977	Stegastes_partitus
ENSHBUG00000017947	chd2	92	88.462	ENSSSCG00000002266	-	100	74.623	Sus_scrofa
ENSHBUG00000017947	chd2	96	72.661	ENSTGUG00000008540	-	100	72.443	Taeniopygia_guttata
ENSHBUG00000017947	chd2	85	90.588	ENSTRUG00000008842	chd2	91	84.410	Takifugu_rubripes
ENSHBUG00000017947	chd2	88	91.667	ENSTNIG00000010760	chd2	96	89.294	Tetraodon_nigroviridis
ENSHBUG00000017947	chd2	73	71.806	ENSTBEG00000017730	-	78	71.806	Tupaia_belangeri
ENSHBUG00000017947	chd2	87	88.462	ENSTTRG00000000430	-	90	74.324	Tursiops_truncatus
ENSHBUG00000017947	chd2	100	70.680	ENSUMAG00000000083	-	96	71.268	Ursus_maritimus
ENSHBUG00000017947	chd2	84	87.161	ENSVPAG00000009645	-	82	87.161	Vicugna_pacos
ENSHBUG00000017947	chd2	93	74.747	ENSXETG00000024129	chd2	91	76.307	Xenopus_tropicalis
ENSHBUG00000017947	chd2	96	92.381	ENSXCOG00000020255	chd2	99	91.919	Xiphophorus_couchianus
ENSHBUG00000017947	chd2	100	91.570	ENSXMAG00000002707	chd2	100	91.625	Xiphophorus_maculatus