EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018067 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4782 bases
Position: chrJH425620.1:83327-88108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032022	S10_plectin	PF03501.15	1.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024557	-	519	-	ENSHBUP00000032022	172 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000018067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018067	-	78	53.285	ENSHBUG00000011566	rps10	98	47.399
ENSHBUG00000018067	-	76	58.394	ENSHBUG00000023819	-	81	58.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018067	-	84	63.448	ENSAPOG00000016494	-	73	63.448	Acanthochromis_polyacanthus
ENSHBUG00000018067	-	74	57.463	ENSAPOG00000014059	-	91	57.463	Acanthochromis_polyacanthus
ENSHBUG00000018067	-	73	56.818	ENSACIG00000013806	-	73	56.818	Amphilophus_citrinellus
ENSHBUG00000018067	-	81	80.576	ENSACIG00000019704	-	71	80.576	Amphilophus_citrinellus
ENSHBUG00000018067	-	80	54.795	ENSAOCG00000011000	-	85	54.795	Amphiprion_ocellaris
ENSHBUG00000018067	-	66	73.451	ENSAOCG00000007730	-	65	73.451	Amphiprion_ocellaris
ENSHBUG00000018067	-	51	64.773	ENSAPEG00000017745	-	56	64.773	Amphiprion_percula
ENSHBUG00000018067	-	61	62.857	ENSAPEG00000019531	-	59	62.857	Amphiprion_percula
ENSHBUG00000018067	-	56	77.083	ENSATEG00000004340	-	68	77.083	Anabas_testudineus
ENSHBUG00000018067	-	100	99.419	ENSACLG00000001013	-	100	99.419	Astatotilapia_calliptera
ENSHBUG00000018067	-	67	60.656	ENSAMXG00000037914	-	73	60.656	Astyanax_mexicanus
ENSHBUG00000018067	-	85	40.136	WBGene00004479	rps-10	89	40.136	Caenorhabditis_elegans
ENSHBUG00000018067	-	85	46.053	ENSCING00000006180	-	62	57.576	Ciona_intestinalis
ENSHBUG00000018067	-	78	53.147	ENSCSEG00000009179	-	84	53.147	Cynoglossus_semilaevis
ENSHBUG00000018067	-	85	47.059	FBgn0285947	RpS10b	91	47.059	Drosophila_melanogaster
ENSHBUG00000018067	-	57	55.102	FBgn0027494	RpS10a	79	46.667	Drosophila_melanogaster
ENSHBUG00000018067	-	56	56.701	ENSEBUG00000015221	-	63	56.701	Eptatretus_burgeri
ENSHBUG00000018067	-	61	61.905	ENSECAG00000039725	-	51	61.905	Equus_caballus
ENSHBUG00000018067	-	76	54.676	ENSFHEG00000008769	-	87	54.676	Fundulus_heteroclitus
ENSHBUG00000018067	-	67	60.656	ENSGAFG00000001335	-	63	60.656	Gambusia_affinis
ENSHBUG00000018067	-	74	71.875	ENSLBEG00000020432	-	84	71.875	Labrus_bergylta
ENSHBUG00000018067	-	84	50.658	ENSLACG00000010998	-	87	50.658	Latimeria_chalumnae
ENSHBUG00000018067	-	100	99.419	ENSMZEG00005026198	-	100	99.419	Maylandia_zebra
ENSHBUG00000018067	-	76	59.854	ENSMZEG00005007838	-	81	59.854	Maylandia_zebra
ENSHBUG00000018067	-	56	68.750	ENSMMOG00000003228	-	54	68.750	Mola_mola
ENSHBUG00000018067	-	77	61.654	ENSMMOG00000014380	-	65	61.654	Mola_mola
ENSHBUG00000018067	-	67	62.295	ENSMALG00000015614	-	76	62.295	Monopterus_albus
ENSHBUG00000018067	-	67	63.115	ENSNBRG00000008848	-	98	56.738	Neolamprologus_brichardi
ENSHBUG00000018067	-	100	97.674	ENSNBRG00000016554	-	100	97.674	Neolamprologus_brichardi
ENSHBUG00000018067	-	80	56.757	ENSPKIG00000013061	-	81	56.757	Paramormyrops_kingsleyae
ENSHBUG00000018067	-	67	59.016	ENSPMGG00000017071	-	65	59.016	Periophthalmus_magnuspinnatus
ENSHBUG00000018067	-	58	67.677	ENSPMAG00000010266	-	53	67.677	Petromyzon_marinus
ENSHBUG00000018067	-	88	43.046	ENSPMAG00000003064	-	88	43.046	Petromyzon_marinus
ENSHBUG00000018067	-	58	66.000	ENSPLAG00000012690	-	79	54.074	Poecilia_latipinna
ENSHBUG00000018067	-	76	59.124	ENSPNYG00000012665	-	81	59.124	Pundamilia_nyererei
ENSHBUG00000018067	-	100	98.837	ENSPNYG00000006286	-	100	98.837	Pundamilia_nyererei
ENSHBUG00000018067	-	83	54.930	ENSPNAG00000021290	-	80	54.930	Pygocentrus_nattereri
ENSHBUG00000018067	-	53	46.739	YMR230W	RPS10B	86	46.739	Saccharomyces_cerevisiae
ENSHBUG00000018067	-	53	46.739	YOR293W	RPS10A	86	46.739	Saccharomyces_cerevisiae
ENSHBUG00000018067	-	57	67.677	ENSSFOG00015012004	-	56	67.677	Scleropages_formosus
ENSHBUG00000018067	-	82	56.000	ENSSFOG00015009603	-	75	56.000	Scleropages_formosus
ENSHBUG00000018067	-	67	59.836	ENSSDUG00000010997	-	73	59.836	Seriola_dumerili
ENSHBUG00000018067	-	74	65.385	ENSSDUG00000011052	-	82	65.385	Seriola_dumerili
ENSHBUG00000018067	-	67	59.836	ENSSLDG00000012473	-	78	59.836	Seriola_lalandi_dorsalis
ENSHBUG00000018067	-	94	60.736	ENSSLDG00000016257	-	91	60.736	Seriola_lalandi_dorsalis
ENSHBUG00000018067	-	60	63.462	ENSSPAG00000015615	-	81	63.462	Stegastes_partitus
ENSHBUG00000018067	-	88	58.278	ENSSPAG00000012512	-	75	58.278	Stegastes_partitus
ENSHBUG00000018067	-	71	56.098	ENSSSCG00000033521	-	76	56.098	Sus_scrofa
ENSHBUG00000018067	-	83	47.020	ENSXETG00000032983	-	75	48.344	Xenopus_tropicalis
ENSHBUG00000018067	-	76	55.000	ENSXCOG00000016917	-	86	55.000	Xiphophorus_couchianus
ENSHBUG00000018067	-	76	53.435	ENSXMAG00000029046	-	75	53.435	Xiphophorus_maculatus