EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018072 (Gene tree)
Gene ID: 102292164
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC102292164
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5216 bases
Position: chrJH426283.1:21-5236
Accession: 102292164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000016134	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034084	-	4177	XM_005951032	ENSHBUP00000016134	871 (aa)	XP_005951094	UPI0003BDAFC4

Gene Model

Click here to download ENSHBUG00000018072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018072	-	67	83.077	ENSHBUG00000015375	-	99	82.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018072	-	60	58.318	ENSAPOG00000000444	-	90	59.184	Acanthochromis_polyacanthus
ENSHBUG00000018072	-	99	64.957	ENSATEG00000011040	-	78	57.473	Anabas_testudineus
ENSHBUG00000018072	-	99	87.701	ENSACLG00000001833	-	93	87.701	Astatotilapia_calliptera
ENSHBUG00000018072	-	60	75.332	ENSACLG00000001777	-	99	75.901	Astatotilapia_calliptera
ENSHBUG00000018072	-	52	97.778	ENSACLG00000001800	-	100	97.778	Astatotilapia_calliptera
ENSHBUG00000018072	-	91	53.602	ENSCVAG00000003284	-	81	53.602	Cyprinodon_variegatus
ENSHBUG00000018072	-	63	53.451	ENSFHEG00000010614	-	74	54.049	Fundulus_heteroclitus
ENSHBUG00000018072	-	63	53.237	ENSFHEG00000010603	-	73	54.137	Fundulus_heteroclitus
ENSHBUG00000018072	-	88	54.271	ENSGAFG00000006087	-	99	54.397	Gambusia_affinis
ENSHBUG00000018072	-	64	56.491	ENSKMAG00000011735	-	73	56.250	Kryptolebias_marmoratus
ENSHBUG00000018072	-	98	57.746	ENSLBEG00000015796	-	82	56.983	Labrus_bergylta
ENSHBUG00000018072	-	77	57.603	ENSMAMG00000013245	-	60	57.603	Mastacembelus_armatus
ENSHBUG00000018072	-	62	76.697	ENSMZEG00005020584	-	99	76.697	Maylandia_zebra
ENSHBUG00000018072	-	51	81.737	ENSNBRG00000005577	-	99	81.737	Neolamprologus_brichardi
ENSHBUG00000018072	-	54	57.173	ENSOMEG00000018335	-	72	54.054	Oryzias_melastigma
ENSHBUG00000018072	-	59	55.198	ENSPLAG00000023261	-	98	55.955	Poecilia_latipinna
ENSHBUG00000018072	-	66	52.922	ENSPMEG00000009067	-	76	53.088	Poecilia_mexicana
ENSHBUG00000018072	-	88	54.660	ENSPMEG00000009099	-	99	55.164	Poecilia_mexicana
ENSHBUG00000018072	-	66	54.484	ENSPREG00000006740	-	79	54.992	Poecilia_reticulata
ENSHBUG00000018072	-	98	60.606	ENSSMAG00000003569	-	68	60.606	Scophthalmus_maximus
ENSHBUG00000018072	-	99	61.224	ENSSDUG00000001451	-	73	61.224	Seriola_dumerili
ENSHBUG00000018072	-	99	50.780	ENSXMAG00000028779	-	89	51.400	Xiphophorus_maculatus