EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018098 (Gene tree)
Gene ID: 102310510
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 23862 bases
Position: chrJH425352.1:1867064-1890925
Accession: 102310510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000016074	RNA_pol_Rpb1_5	PF04998.17	1.7e-88	1	1
ENSHBUP00000016074	RNA_pol_Rpb1_4	PF05000.17	5.1e-32	1	1
ENSHBUP00000016074	RNA_pol_Rpb1_2	PF00623.20	1.2e-72	1	1
ENSHBUP00000016074	RNA_pol_Rpb1_3	PF04983.18	6.9e-41	1	1
ENSHBUP00000016074	RNA_pol_Rpb1_1	PF04997.12	1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024502	-	5456	XM_005919585	ENSHBUP00000016074	1390 (aa)	XP_005919647	UPI0003BCE255

Gene Model

Click here to download ENSHBUG00000018098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018098	polr3a	91	37.927	ENSHBUG00000018937	polr2a	68	38.403

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018098	polr3a	100	89.640	ENSG00000148606	POLR3A	98	91.772	Homo_sapiens
ENSHBUG00000018098	polr3a	62	92.915	ENSAPOG00000022727	polr3a	99	92.915	Acanthochromis_polyacanthus
ENSHBUG00000018098	polr3a	100	89.375	ENSAMEG00000017801	POLR3A	100	89.375	Ailuropoda_melanoleuca
ENSHBUG00000018098	polr3a	94	97.923	ENSACIG00000024504	polr3a	97	97.923	Amphilophus_citrinellus
ENSHBUG00000018098	polr3a	100	96.547	ENSAOCG00000002071	polr3a	100	96.547	Amphiprion_ocellaris
ENSHBUG00000018098	polr3a	100	93.237	ENSAOCG00000003949	-	100	93.237	Amphiprion_ocellaris
ENSHBUG00000018098	polr3a	100	96.547	ENSAPEG00000013351	polr3a	100	96.547	Amphiprion_percula
ENSHBUG00000018098	polr3a	100	96.403	ENSAPEG00000001966	-	100	96.403	Amphiprion_percula
ENSHBUG00000018098	polr3a	100	96.906	ENSATEG00000023277	polr3a	100	96.906	Anabas_testudineus
ENSHBUG00000018098	polr3a	99	90.327	ENSAPLG00000015878	POLR3A	99	90.327	Anas_platyrhynchos
ENSHBUG00000018098	polr3a	93	88.999	ENSACAG00000007985	POLR3A	99	88.999	Anolis_carolinensis
ENSHBUG00000018098	polr3a	100	87.141	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSHBUG00000018098	polr3a	100	99.856	ENSACLG00000005914	polr3a	100	99.856	Astatotilapia_calliptera
ENSHBUG00000018098	polr3a	100	89.353	ENSAMXG00000018852	polr3a	100	89.353	Astyanax_mexicanus
ENSHBUG00000018098	polr3a	100	89.640	ENSBTAG00000013259	POLR3A	100	89.640	Bos_taurus
ENSHBUG00000018098	polr3a	98	56.908	WBGene00004411	rpc-1	99	56.908	Caenorhabditis_elegans
ENSHBUG00000018098	polr3a	100	89.424	ENSCJAG00000001015	POLR3A	100	89.424	Callithrix_jacchus
ENSHBUG00000018098	polr3a	100	89.640	ENSCAFG00000015546	POLR3A	100	89.640	Canis_familiaris
ENSHBUG00000018098	polr3a	100	89.640	ENSCAFG00020014711	POLR3A	100	89.640	Canis_lupus_dingo
ENSHBUG00000018098	polr3a	100	89.353	ENSCHIG00000000352	POLR3A	100	89.353	Capra_hircus
ENSHBUG00000018098	polr3a	100	89.065	ENSTSYG00000006671	POLR3A	100	89.065	Carlito_syrichta
ENSHBUG00000018098	polr3a	99	89.309	ENSCAPG00000016031	POLR3A	100	89.309	Cavia_aperea
ENSHBUG00000018098	polr3a	100	89.353	ENSCPOG00000022387	POLR3A	100	89.353	Cavia_porcellus
ENSHBUG00000018098	polr3a	100	87.986	ENSCCAG00000032995	POLR3A	100	87.986	Cebus_capucinus
ENSHBUG00000018098	polr3a	100	89.640	ENSCATG00000035842	POLR3A	98	91.772	Cercocebus_atys
ENSHBUG00000018098	polr3a	100	89.568	ENSCLAG00000009629	POLR3A	100	89.568	Chinchilla_lanigera
ENSHBUG00000018098	polr3a	100	89.640	ENSCSAG00000009292	POLR3A	100	89.640	Chlorocebus_sabaeus
ENSHBUG00000018098	polr3a	85	75.169	ENSCHOG00000008368	POLR3A	100	75.169	Choloepus_hoffmanni
ENSHBUG00000018098	polr3a	99	90.353	ENSCPBG00000002079	POLR3A	99	90.353	Chrysemys_picta_bellii
ENSHBUG00000018098	polr3a	99	69.020	ENSCSAVG00000009925	-	99	69.020	Ciona_savignyi
ENSHBUG00000018098	polr3a	86	85.341	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSHBUG00000018098	polr3a	78	89.774	ENSCGRG00001015599	-	92	89.774	Cricetulus_griseus_chok1gshd
ENSHBUG00000018098	polr3a	88	88.465	ENSCGRG00000001019	Polr3a	100	88.465	Cricetulus_griseus_crigri
ENSHBUG00000018098	polr3a	100	95.683	ENSCSEG00000016653	polr3a	100	95.683	Cynoglossus_semilaevis
ENSHBUG00000018098	polr3a	100	95.755	ENSCVAG00000023049	polr3a	100	95.755	Cyprinodon_variegatus
ENSHBUG00000018098	polr3a	99	91.931	ENSDARG00000102569	polr3a	99	91.931	Danio_rerio
ENSHBUG00000018098	polr3a	100	88.633	ENSDNOG00000010194	POLR3A	100	88.633	Dasypus_novemcinctus
ENSHBUG00000018098	polr3a	100	89.496	ENSDORG00000000184	Polr3a	100	89.496	Dipodomys_ordii
ENSHBUG00000018098	polr3a	99	56.802	FBgn0030687	CG17209	99	56.802	Drosophila_melanogaster
ENSHBUG00000018098	polr3a	88	89.474	ENSETEG00000007477	POLR3A	89	89.474	Echinops_telfairi
ENSHBUG00000018098	polr3a	59	75.615	ENSEBUG00000013761	polr3a	98	75.615	Eptatretus_burgeri
ENSHBUG00000018098	polr3a	100	89.496	ENSEASG00005023053	POLR3A	100	89.496	Equus_asinus_asinus
ENSHBUG00000018098	polr3a	97	89.568	ENSECAG00000019416	POLR3A	100	89.252	Equus_caballus
ENSHBUG00000018098	polr3a	96	85.086	ENSEEUG00000001774	POLR3A	100	85.086	Erinaceus_europaeus
ENSHBUG00000018098	polr3a	100	91.170	ENSELUG00000014016	polr3a	100	91.170	Esox_lucius
ENSHBUG00000018098	polr3a	100	89.712	ENSFCAG00000000843	POLR3A	100	89.712	Felis_catus
ENSHBUG00000018098	polr3a	100	89.863	ENSFALG00000006913	POLR3A	100	89.863	Ficedula_albicollis
ENSHBUG00000018098	polr3a	100	89.568	ENSFDAG00000007813	POLR3A	100	89.568	Fukomys_damarensis
ENSHBUG00000018098	polr3a	95	95.000	ENSFHEG00000011922	polr3a	99	95.000	Fundulus_heteroclitus
ENSHBUG00000018098	polr3a	100	87.932	ENSGMOG00000000291	polr3a	99	87.932	Gadus_morhua
ENSHBUG00000018098	polr3a	100	90.360	ENSGALG00000004947	POLR3A	100	90.360	Gallus_gallus
ENSHBUG00000018098	polr3a	100	95.396	ENSGAFG00000005112	polr3a	100	95.396	Gambusia_affinis
ENSHBUG00000018098	polr3a	100	95.324	ENSGACG00000002304	polr3a	100	95.324	Gasterosteus_aculeatus
ENSHBUG00000018098	polr3a	95	90.235	ENSGAGG00000010386	POLR3A	98	90.235	Gopherus_agassizii
ENSHBUG00000018098	polr3a	99	88.512	ENSGGOG00000027729	POLR3A	100	90.553	Gorilla_gorilla
ENSHBUG00000018098	polr3a	100	89.568	ENSHGLG00000017899	POLR3A	100	89.568	Heterocephalus_glaber_female
ENSHBUG00000018098	polr3a	100	89.568	ENSHGLG00100008483	POLR3A	100	89.568	Heterocephalus_glaber_male
ENSHBUG00000018098	polr3a	100	94.748	ENSHCOG00000001075	polr3a	100	94.748	Hippocampus_comes
ENSHBUG00000018098	polr3a	100	89.568	ENSSTOG00000012983	POLR3A	100	89.568	Ictidomys_tridecemlineatus
ENSHBUG00000018098	polr3a	100	95.540	ENSKMAG00000015290	polr3a	100	95.540	Kryptolebias_marmoratus
ENSHBUG00000018098	polr3a	99	94.096	ENSLBEG00000017214	polr3a	99	94.096	Labrus_bergylta
ENSHBUG00000018098	polr3a	97	87.732	ENSLACG00000018557	POLR3A	99	87.732	Latimeria_chalumnae
ENSHBUG00000018098	polr3a	100	92.319	ENSLOCG00000004942	polr3a	100	92.319	Lepisosteus_oculatus
ENSHBUG00000018098	polr3a	100	88.210	ENSLAFG00000016719	POLR3A	100	88.210	Loxodonta_africana
ENSHBUG00000018098	polr3a	100	89.568	ENSMFAG00000032218	POLR3A	100	89.568	Macaca_fascicularis
ENSHBUG00000018098	polr3a	100	89.568	ENSMMUG00000005514	POLR3A	98	91.772	Macaca_mulatta
ENSHBUG00000018098	polr3a	99	83.345	ENSMNEG00000035163	POLR3A	99	89.146	Macaca_nemestrina
ENSHBUG00000018098	polr3a	100	86.115	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSHBUG00000018098	polr3a	100	96.475	ENSMAMG00000017497	polr3a	100	96.475	Mastacembelus_armatus
ENSHBUG00000018098	polr3a	100	99.856	ENSMZEG00005000576	polr3a	100	99.856	Maylandia_zebra
ENSHBUG00000018098	polr3a	100	73.082	ENSMGAG00000005713	-	100	73.082	Meleagris_gallopavo
ENSHBUG00000018098	polr3a	100	87.194	ENSMAUG00000016247	Polr3a	100	87.194	Mesocricetus_auratus
ENSHBUG00000018098	polr3a	100	89.640	ENSMICG00000005937	POLR3A	100	90.704	Microcebus_murinus
ENSHBUG00000018098	polr3a	100	89.424	ENSMOCG00000012185	Polr3a	100	89.424	Microtus_ochrogaster
ENSHBUG00000018098	polr3a	100	95.612	ENSMMOG00000013822	polr3a	100	95.612	Mola_mola
ENSHBUG00000018098	polr3a	100	89.640	ENSMODG00000001036	POLR3A	100	89.640	Monodelphis_domestica
ENSHBUG00000018098	polr3a	100	96.547	ENSMALG00000001249	polr3a	100	96.547	Monopterus_albus
ENSHBUG00000018098	polr3a	100	89.353	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.353	Mus_caroli
ENSHBUG00000018098	polr3a	100	89.424	ENSMUSG00000025280	Polr3a	100	89.424	Mus_musculus
ENSHBUG00000018098	polr3a	100	89.353	MGP_PahariEiJ_G0030029	Polr3a	100	89.353	Mus_pahari
ENSHBUG00000018098	polr3a	100	86.763	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSHBUG00000018098	polr3a	100	88.944	ENSMPUG00000003790	POLR3A	100	88.944	Mustela_putorius_furo
ENSHBUG00000018098	polr3a	100	88.417	ENSMLUG00000011522	POLR3A	100	88.417	Myotis_lucifugus
ENSHBUG00000018098	polr3a	100	87.986	ENSNGAG00000015863	Polr3a	100	87.986	Nannospalax_galili
ENSHBUG00000018098	polr3a	100	96.978	ENSNBRG00000014262	polr3a	100	96.978	Neolamprologus_brichardi
ENSHBUG00000018098	polr3a	87	83.945	ENSNLEG00000010501	POLR3A	92	83.945	Nomascus_leucogenys
ENSHBUG00000018098	polr3a	99	77.164	ENSMEUG00000012446	POLR3A	100	77.164	Notamacropus_eugenii
ENSHBUG00000018098	polr3a	100	84.748	ENSOPRG00000001880	-	100	84.748	Ochotona_princeps
ENSHBUG00000018098	polr3a	100	88.993	ENSODEG00000015146	POLR3A	100	88.993	Octodon_degus
ENSHBUG00000018098	polr3a	100	99.424	ENSONIG00000016129	polr3a	100	99.424	Oreochromis_niloticus
ENSHBUG00000018098	polr3a	98	89.116	ENSOANG00000007013	POLR3A	100	89.116	Ornithorhynchus_anatinus
ENSHBUG00000018098	polr3a	100	89.137	ENSOCUG00000012450	POLR3A	100	89.137	Oryctolagus_cuniculus
ENSHBUG00000018098	polr3a	100	95.683	ENSORLG00000008958	polr3a	100	95.683	Oryzias_latipes
ENSHBUG00000018098	polr3a	100	93.381	ENSORLG00020007525	polr3a	98	96.051	Oryzias_latipes_hni
ENSHBUG00000018098	polr3a	100	95.683	ENSORLG00015006633	polr3a	100	95.683	Oryzias_latipes_hsok
ENSHBUG00000018098	polr3a	100	95.036	ENSOMEG00000012865	polr3a	100	95.036	Oryzias_melastigma
ENSHBUG00000018098	polr3a	100	89.353	ENSOGAG00000010995	POLR3A	100	89.353	Otolemur_garnettii
ENSHBUG00000018098	polr3a	100	89.296	ENSOARG00000009656	POLR3A	100	89.296	Ovis_aries
ENSHBUG00000018098	polr3a	100	89.712	ENSPPRG00000002128	POLR3A	100	89.712	Panthera_pardus
ENSHBUG00000018098	polr3a	100	89.712	ENSPTIG00000020916	POLR3A	100	89.712	Panthera_tigris_altaica
ENSHBUG00000018098	polr3a	100	89.712	ENSPTRG00000002664	POLR3A	98	91.772	Pan_troglodytes
ENSHBUG00000018098	polr3a	100	89.568	ENSPANG00000022508	POLR3A	98	91.772	Papio_anubis
ENSHBUG00000018098	polr3a	100	92.950	ENSPKIG00000008140	polr3a	100	92.970	Paramormyrops_kingsleyae
ENSHBUG00000018098	polr3a	98	90.285	ENSPSIG00000002092	POLR3A	100	90.285	Pelodiscus_sinensis
ENSHBUG00000018098	polr3a	100	89.137	ENSPEMG00000006768	Polr3a	100	89.137	Peromyscus_maniculatus_bairdii
ENSHBUG00000018098	polr3a	100	89.712	ENSPCIG00000015842	POLR3A	100	89.712	Phascolarctos_cinereus
ENSHBUG00000018098	polr3a	54	96.107	ENSPFOG00000006458	polr3a	100	96.107	Poecilia_formosa
ENSHBUG00000018098	polr3a	100	95.827	ENSPLAG00000000997	polr3a	100	95.827	Poecilia_latipinna
ENSHBUG00000018098	polr3a	100	95.755	ENSPMEG00000006821	polr3a	100	95.755	Poecilia_mexicana
ENSHBUG00000018098	polr3a	100	95.540	ENSPREG00000002385	polr3a	100	95.540	Poecilia_reticulata
ENSHBUG00000018098	polr3a	93	89.388	ENSPPYG00000002305	POLR3A	99	89.388	Pongo_abelii
ENSHBUG00000018098	polr3a	84	78.053	ENSPCAG00000005690	POLR3A	87	78.053	Procavia_capensis
ENSHBUG00000018098	polr3a	100	89.496	ENSPCOG00000028311	POLR3A	100	89.496	Propithecus_coquereli
ENSHBUG00000018098	polr3a	100	88.201	ENSPVAG00000015553	POLR3A	100	88.201	Pteropus_vampyrus
ENSHBUG00000018098	polr3a	100	99.712	ENSPNYG00000020987	polr3a	100	99.712	Pundamilia_nyererei
ENSHBUG00000018098	polr3a	99	88.689	ENSPNAG00000006629	polr3a	99	88.689	Pygocentrus_nattereri
ENSHBUG00000018098	polr3a	100	89.281	ENSRNOG00000010008	Polr3a	100	89.281	Rattus_norvegicus
ENSHBUG00000018098	polr3a	100	86.259	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSHBUG00000018098	polr3a	100	89.568	ENSRROG00000025527	POLR3A	98	91.772	Rhinopithecus_roxellana
ENSHBUG00000018098	polr3a	97	50.105	YOR116C	RPO31	98	50.105	Saccharomyces_cerevisiae
ENSHBUG00000018098	polr3a	100	89.568	ENSSBOG00000022199	POLR3A	100	89.568	Saimiri_boliviensis_boliviensis
ENSHBUG00000018098	polr3a	100	89.640	ENSSHAG00000007588	POLR3A	94	89.640	Sarcophilus_harrisii
ENSHBUG00000018098	polr3a	100	93.453	ENSSFOG00015014357	polr3a	100	93.453	Scleropages_formosus
ENSHBUG00000018098	polr3a	100	95.827	ENSSMAG00000001780	polr3a	100	95.827	Scophthalmus_maximus
ENSHBUG00000018098	polr3a	100	96.691	ENSSDUG00000019840	polr3a	100	96.691	Seriola_dumerili
ENSHBUG00000018098	polr3a	100	96.691	ENSSLDG00000023908	polr3a	100	96.691	Seriola_lalandi_dorsalis
ENSHBUG00000018098	polr3a	69	88.401	ENSSARG00000009916	POLR3A	89	88.401	Sorex_araneus
ENSHBUG00000018098	polr3a	100	87.914	ENSSPUG00000013209	POLR3A	100	87.914	Sphenodon_punctatus
ENSHBUG00000018098	polr3a	100	96.691	ENSSPAG00000017712	polr3a	100	96.691	Stegastes_partitus
ENSHBUG00000018098	polr3a	100	89.568	ENSSSCG00000010327	POLR3A	100	89.568	Sus_scrofa
ENSHBUG00000018098	polr3a	100	90.000	ENSTGUG00000006423	-	100	90.000	Taeniopygia_guttata
ENSHBUG00000018098	polr3a	100	95.468	ENSTRUG00000013488	polr3a	100	95.468	Takifugu_rubripes
ENSHBUG00000018098	polr3a	100	95.259	ENSTNIG00000013151	polr3a	100	95.259	Tetraodon_nigroviridis
ENSHBUG00000018098	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSHBUG00000018098	polr3a	100	82.158	ENSTTRG00000007817	POLR3A	100	82.158	Tursiops_truncatus
ENSHBUG00000018098	polr3a	100	87.194	ENSUAMG00000011283	POLR3A	100	87.194	Ursus_americanus
ENSHBUG00000018098	polr3a	100	89.568	ENSUMAG00000013913	POLR3A	100	89.568	Ursus_maritimus
ENSHBUG00000018098	polr3a	99	81.600	ENSVPAG00000003285	POLR3A	100	81.600	Vicugna_pacos
ENSHBUG00000018098	polr3a	100	89.640	ENSVVUG00000025523	POLR3A	100	89.640	Vulpes_vulpes
ENSHBUG00000018098	polr3a	86	90.142	ENSXETG00000018101	polr3a	100	90.142	Xenopus_tropicalis
ENSHBUG00000018098	polr3a	100	95.683	ENSXMAG00000015213	polr3a	100	95.683	Xiphophorus_maculatus