EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000018296 (Gene tree)
Gene ID: 102305669
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 8103 bases
Position: chrJH425384.1:569332-577434
Accession: 102305669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032142	tRNA_int_end_N2	PF12928.7	3.1e-19	1	1
ENSHBUP00000032121	tRNA_int_end_N2	PF12928.7	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024814	-	1164	-	ENSHBUP00000032121	387 (aa)	-	-
ENSHBUT00000024815	-	2911	XM_005924156	ENSHBUP00000032142	504 (aa)	XP_005924218	UPI0003BCBC1D

Gene Model

Click here to download ENSHBUG00000018296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018296	tsen54	99	36.574	ENSG00000182173	TSEN54	100	66.667	Homo_sapiens
ENSHBUG00000018296	tsen54	92	77.516	ENSAPOG00000009659	tsen54	89	78.158	Acanthochromis_polyacanthus
ENSHBUG00000018296	tsen54	99	37.793	ENSAMEG00000009414	TSEN54	87	43.011	Ailuropoda_melanoleuca
ENSHBUG00000018296	tsen54	92	78.587	ENSAOCG00000000152	tsen54	88	78.587	Amphiprion_ocellaris
ENSHBUG00000018296	tsen54	92	77.730	ENSAPEG00000018931	tsen54	88	78.373	Amphiprion_percula
ENSHBUG00000018296	tsen54	92	72.407	ENSATEG00000019860	tsen54	91	73.237	Anabas_testudineus
ENSHBUG00000018296	tsen54	89	41.406	ENSAPLG00000009419	TSEN54	89	44.337	Anas_platyrhynchos
ENSHBUG00000018296	tsen54	89	43.841	ENSACAG00000006714	TSEN54	88	44.050	Anolis_carolinensis
ENSHBUG00000018296	tsen54	99	36.636	ENSANAG00000024061	TSEN54	87	44.681	Aotus_nancymaae
ENSHBUG00000018296	tsen54	92	98.701	ENSACLG00000019800	tsen54	90	98.701	Astatotilapia_calliptera
ENSHBUG00000018296	tsen54	98	50.370	ENSAMXG00000006546	tsen54	87	57.709	Astyanax_mexicanus
ENSHBUG00000018296	tsen54	99	35.880	ENSBTAG00000000824	TSEN54	88	43.737	Bos_taurus
ENSHBUG00000018296	tsen54	99	36.175	ENSCJAG00000014278	TSEN54	87	44.255	Callithrix_jacchus
ENSHBUG00000018296	tsen54	99	37.150	ENSCAFG00000004798	TSEN54	87	44.000	Canis_familiaris
ENSHBUG00000018296	tsen54	99	37.150	ENSCAFG00020000312	TSEN54	87	44.000	Canis_lupus_dingo
ENSHBUG00000018296	tsen54	99	37.412	ENSCHIG00000019908	TSEN54	87	43.070	Capra_hircus
ENSHBUG00000018296	tsen54	99	38.269	ENSTSYG00000037439	TSEN54	89	43.099	Carlito_syrichta
ENSHBUG00000018296	tsen54	99	37.900	ENSCCAG00000036624	TSEN54	87	44.255	Cebus_capucinus
ENSHBUG00000018296	tsen54	99	37.529	ENSCATG00000042877	TSEN54	87	44.681	Cercocebus_atys
ENSHBUG00000018296	tsen54	99	37.900	ENSCLAG00000002924	TSEN54	87	44.093	Chinchilla_lanigera
ENSHBUG00000018296	tsen54	99	36.854	ENSCSAG00000004809	TSEN54	87	44.894	Chlorocebus_sabaeus
ENSHBUG00000018296	tsen54	89	45.957	ENSCPBG00000028071	TSEN54	89	45.963	Chrysemys_picta_bellii
ENSHBUG00000018296	tsen54	99	37.972	ENSCANG00000028053	TSEN54	92	53.757	Colobus_angolensis_palliatus
ENSHBUG00000018296	tsen54	98	38.028	ENSCGRG00001020029	Tsen54	87	43.284	Cricetulus_griseus_chok1gshd
ENSHBUG00000018296	tsen54	98	38.028	ENSCGRG00000016289	Tsen54	92	37.559	Cricetulus_griseus_crigri
ENSHBUG00000018296	tsen54	99	49.515	ENSCSEG00000020586	tsen54	97	49.515	Cynoglossus_semilaevis
ENSHBUG00000018296	tsen54	98	52.284	ENSDARG00000036844	tsen54	95	52.417	Danio_rerio
ENSHBUG00000018296	tsen54	88	43.038	ENSDNOG00000018452	TSEN54	87	44.093	Dasypus_novemcinctus
ENSHBUG00000018296	tsen54	99	38.389	ENSDORG00000004073	Tsen54	87	45.119	Dipodomys_ordii
ENSHBUG00000018296	tsen54	90	30.000	ENSEBUG00000005203	TSEN54	87	30.769	Eptatretus_burgeri
ENSHBUG00000018296	tsen54	99	38.710	ENSEASG00005000579	TSEN54	87	43.777	Equus_asinus_asinus
ENSHBUG00000018296	tsen54	99	38.710	ENSECAG00000004924	TSEN54	87	43.991	Equus_caballus
ENSHBUG00000018296	tsen54	99	36.674	ENSEEUG00000008467	TSEN54	89	41.205	Erinaceus_europaeus
ENSHBUG00000018296	tsen54	92	58.656	ENSELUG00000017703	tsen54	84	57.863	Esox_lucius
ENSHBUG00000018296	tsen54	99	37.788	ENSFCAG00000023712	TSEN54	88	44.118	Felis_catus
ENSHBUG00000018296	tsen54	85	45.045	ENSFALG00000001119	TSEN54	83	45.578	Ficedula_albicollis
ENSHBUG00000018296	tsen54	98	38.353	ENSFDAG00000019090	TSEN54	88	41.787	Fukomys_damarensis
ENSHBUG00000018296	tsen54	92	70.664	ENSFHEG00000005470	tsen54	90	70.664	Fundulus_heteroclitus
ENSHBUG00000018296	tsen54	75	56.853	ENSGMOG00000013146	tsen54	86	56.853	Gadus_morhua
ENSHBUG00000018296	tsen54	99	36.721	ENSGALG00000047163	TSEN54	86	41.060	Gallus_gallus
ENSHBUG00000018296	tsen54	92	66.454	ENSGAFG00000005111	tsen54	90	66.454	Gambusia_affinis
ENSHBUG00000018296	tsen54	99	54.798	ENSGACG00000014987	tsen54	89	63.135	Gasterosteus_aculeatus
ENSHBUG00000018296	tsen54	89	45.957	ENSGAGG00000006825	TSEN54	87	46.186	Gopherus_agassizii
ENSHBUG00000018296	tsen54	99	36.806	ENSGGOG00000009417	TSEN54	90	45.085	Gorilla_gorilla
ENSHBUG00000018296	tsen54	99	37.727	ENSHGLG00000007979	TSEN54	87	44.374	Heterocephalus_glaber_female
ENSHBUG00000018296	tsen54	99	37.727	ENSHGLG00100005497	TSEN54	87	43.312	Heterocephalus_glaber_male
ENSHBUG00000018296	tsen54	98	55.779	ENSHCOG00000007481	tsen54	91	61.183	Hippocampus_comes
ENSHBUG00000018296	tsen54	98	44.724	ENSIPUG00000000590	tsen54	87	50.324	Ictalurus_punctatus
ENSHBUG00000018296	tsen54	99	37.500	ENSSTOG00000012883	TSEN54	87	43.763	Ictidomys_tridecemlineatus
ENSHBUG00000018296	tsen54	99	38.568	ENSJJAG00000007365	Tsen54	87	44.043	Jaculus_jaculus
ENSHBUG00000018296	tsen54	92	68.802	ENSKMAG00000006944	tsen54	90	68.802	Kryptolebias_marmoratus
ENSHBUG00000018296	tsen54	92	68.908	ENSLBEG00000004199	tsen54	90	68.697	Labrus_bergylta
ENSHBUG00000018296	tsen54	98	34.917	ENSLACG00000009497	TSEN54	89	40.043	Latimeria_chalumnae
ENSHBUG00000018296	tsen54	92	53.402	ENSLOCG00000011191	tsen54	91	52.846	Lepisosteus_oculatus
ENSHBUG00000018296	tsen54	99	37.500	ENSLAFG00000011655	TSEN54	83	43.936	Loxodonta_africana
ENSHBUG00000018296	tsen54	99	36.854	ENSMFAG00000000712	TSEN54	92	55.689	Macaca_fascicularis
ENSHBUG00000018296	tsen54	99	36.854	ENSMNEG00000029199	TSEN54	92	55.689	Macaca_nemestrina
ENSHBUG00000018296	tsen54	99	36.854	ENSMLEG00000044168	TSEN54	78	42.373	Mandrillus_leucophaeus
ENSHBUG00000018296	tsen54	92	73.418	ENSMAMG00000019773	tsen54	90	73.418	Mastacembelus_armatus
ENSHBUG00000018296	tsen54	92	98.268	ENSMZEG00005000884	tsen54	90	98.268	Maylandia_zebra
ENSHBUG00000018296	tsen54	89	38.442	ENSMGAG00000009556	TSEN54	83	42.572	Meleagris_gallopavo
ENSHBUG00000018296	tsen54	99	38.318	ENSMAUG00000016838	Tsen54	87	43.497	Mesocricetus_auratus
ENSHBUG00000018296	tsen54	99	39.524	ENSMICG00000044012	TSEN54	87	45.934	Microcebus_murinus
ENSHBUG00000018296	tsen54	99	39.387	ENSMOCG00000021585	Tsen54	87	43.949	Microtus_ochrogaster
ENSHBUG00000018296	tsen54	99	56.743	ENSMMOG00000020189	tsen54	88	64.444	Mola_mola
ENSHBUG00000018296	tsen54	99	37.360	ENSMODG00000007438	TSEN54	86	42.531	Monodelphis_domestica
ENSHBUG00000018296	tsen54	92	73.166	ENSMALG00000020573	tsen54	90	73.795	Monopterus_albus
ENSHBUG00000018296	tsen54	99	38.249	MGP_CAROLIEiJ_G0017417	Tsen54	87	43.617	Mus_caroli
ENSHBUG00000018296	tsen54	99	39.588	ENSMUSG00000020781	Tsen54	87	44.255	Mus_musculus
ENSHBUG00000018296	tsen54	99	39.631	MGP_PahariEiJ_G0018547	Tsen54	87	44.813	Mus_pahari
ENSHBUG00000018296	tsen54	99	38.864	MGP_SPRETEiJ_G0018262	Tsen54	87	43.856	Mus_spretus
ENSHBUG00000018296	tsen54	99	35.514	ENSMPUG00000013870	TSEN54	87	42.380	Mustela_putorius_furo
ENSHBUG00000018296	tsen54	99	37.170	ENSMLUG00000015298	TSEN54	87	43.237	Myotis_lucifugus
ENSHBUG00000018296	tsen54	88	44.444	ENSNGAG00000015673	Tsen54	87	44.017	Nannospalax_galili
ENSHBUG00000018296	tsen54	99	33.102	ENSMEUG00000011908	TSEN54	89	39.813	Notamacropus_eugenii
ENSHBUG00000018296	tsen54	99	34.699	ENSOPRG00000012513	TSEN54	87	40.749	Ochotona_princeps
ENSHBUG00000018296	tsen54	92	95.248	ENSONIG00000009543	tsen54	90	95.248	Oreochromis_niloticus
ENSHBUG00000018296	tsen54	99	36.580	ENSOCUG00000009875	TSEN54	87	40.385	Oryctolagus_cuniculus
ENSHBUG00000018296	tsen54	92	62.796	ENSORLG00000000852	tsen54	90	62.851	Oryzias_latipes
ENSHBUG00000018296	tsen54	92	63.441	ENSORLG00020018221	tsen54	90	63.499	Oryzias_latipes_hni
ENSHBUG00000018296	tsen54	89	64.238	ENSORLG00015009413	tsen54	80	75.806	Oryzias_latipes_hsok
ENSHBUG00000018296	tsen54	93	63.559	ENSOMEG00000014402	tsen54	89	63.559	Oryzias_melastigma
ENSHBUG00000018296	tsen54	98	36.516	ENSOGAG00000001442	TSEN54	87	42.612	Otolemur_garnettii
ENSHBUG00000018296	tsen54	99	35.681	ENSOARG00000010361	TSEN54	89	40.640	Ovis_aries
ENSHBUG00000018296	tsen54	99	36.891	ENSPPAG00000043519	TSEN54	90	44.176	Pan_paniscus
ENSHBUG00000018296	tsen54	99	38.018	ENSPPRG00000009162	TSEN54	88	44.328	Panthera_pardus
ENSHBUG00000018296	tsen54	99	38.051	ENSPTIG00000019312	TSEN54	85	43.237	Panthera_tigris_altaica
ENSHBUG00000018296	tsen54	99	37.296	ENSPTRG00000009646	TSEN54	85	57.051	Pan_troglodytes
ENSHBUG00000018296	tsen54	99	36.854	ENSPANG00000020133	TSEN54	91	56.287	Papio_anubis
ENSHBUG00000018296	tsen54	99	46.959	ENSPKIG00000023018	tsen54	97	47.202	Paramormyrops_kingsleyae
ENSHBUG00000018296	tsen54	90	40.816	ENSPSIG00000012807	TSEN54	89	42.188	Pelodiscus_sinensis
ENSHBUG00000018296	tsen54	98	41.818	ENSPMGG00000019578	tsen54	88	47.344	Periophthalmus_magnuspinnatus
ENSHBUG00000018296	tsen54	99	38.679	ENSPEMG00000014857	Tsen54	87	44.397	Peromyscus_maniculatus_bairdii
ENSHBUG00000018296	tsen54	92	67.789	ENSPFOG00000022740	tsen54	90	67.789	Poecilia_formosa
ENSHBUG00000018296	tsen54	92	68.365	ENSPLAG00000014847	tsen54	90	68.365	Poecilia_latipinna
ENSHBUG00000018296	tsen54	92	68.153	ENSPMEG00000022876	tsen54	90	68.153	Poecilia_mexicana
ENSHBUG00000018296	tsen54	92	67.941	ENSPREG00000013090	tsen54	90	67.941	Poecilia_reticulata
ENSHBUG00000018296	tsen54	100	41.045	ENSPPYG00000008629	TSEN54	88	45.283	Pongo_abelii
ENSHBUG00000018296	tsen54	88	39.746	ENSPCAG00000002093	TSEN54	91	39.746	Procavia_capensis
ENSHBUG00000018296	tsen54	99	37.500	ENSPCOG00000027880	TSEN54	88	43.923	Propithecus_coquereli
ENSHBUG00000018296	tsen54	99	37.327	ENSPVAG00000008446	TSEN54	87	43.644	Pteropus_vampyrus
ENSHBUG00000018296	tsen54	89	94.253	ENSPNYG00000010217	tsen54	90	97.011	Pundamilia_nyererei
ENSHBUG00000018296	tsen54	99	48.095	ENSPNAG00000003770	tsen54	88	53.518	Pygocentrus_nattereri
ENSHBUG00000018296	tsen54	99	39.059	ENSRNOG00000004598	Tsen54	87	43.856	Rattus_norvegicus
ENSHBUG00000018296	tsen54	99	37.296	ENSRBIG00000043040	TSEN54	92	54.335	Rhinopithecus_bieti
ENSHBUG00000018296	tsen54	99	37.296	ENSRROG00000030797	TSEN54	87	44.468	Rhinopithecus_roxellana
ENSHBUG00000018296	tsen54	99	33.180	ENSSBOG00000013543	TSEN54	86	41.915	Saimiri_boliviensis_boliviensis
ENSHBUG00000018296	tsen54	99	36.977	ENSSHAG00000018127	TSEN54	87	42.708	Sarcophilus_harrisii
ENSHBUG00000018296	tsen54	99	46.172	ENSSFOG00015004093	tsen54	97	46.539	Scleropages_formosus
ENSHBUG00000018296	tsen54	89	69.099	ENSSMAG00000012449	tsen54	89	69.957	Scophthalmus_maximus
ENSHBUG00000018296	tsen54	92	75.052	ENSSDUG00000021506	tsen54	90	75.891	Seriola_dumerili
ENSHBUG00000018296	tsen54	92	74.633	ENSSLDG00000016303	tsen54	90	75.472	Seriola_lalandi_dorsalis
ENSHBUG00000018296	tsen54	81	43.721	ENSSPUG00000008988	TSEN54	98	43.151	Sphenodon_punctatus
ENSHBUG00000018296	tsen54	99	61.654	ENSSPAG00000008047	tsen54	96	61.654	Stegastes_partitus
ENSHBUG00000018296	tsen54	99	66.165	ENSSPAG00000008098	-	89	74.429	Stegastes_partitus
ENSHBUG00000018296	tsen54	100	38.051	ENSSSCG00000036852	TSEN54	87	44.043	Sus_scrofa
ENSHBUG00000018296	tsen54	89	41.579	ENSTGUG00000008548	TSEN54	89	44.307	Taeniopygia_guttata
ENSHBUG00000018296	tsen54	92	65.733	ENSTRUG00000004230	tsen54	90	65.733	Takifugu_rubripes
ENSHBUG00000018296	tsen54	88	62.528	ENSTNIG00000011281	tsen54	88	63.274	Tetraodon_nigroviridis
ENSHBUG00000018296	tsen54	99	38.051	ENSTTRG00000015828	TSEN54	89	41.019	Tursiops_truncatus
ENSHBUG00000018296	tsen54	99	37.002	ENSUAMG00000010045	TSEN54	83	56.738	Ursus_americanus
ENSHBUG00000018296	tsen54	99	36.768	ENSUMAG00000008979	TSEN54	97	36.768	Ursus_maritimus
ENSHBUG00000018296	tsen54	99	37.383	ENSVVUG00000011411	TSEN54	88	44.255	Vulpes_vulpes
ENSHBUG00000018296	tsen54	88	43.844	ENSXETG00000012532	tsen54	78	62.500	Xenopus_tropicalis
ENSHBUG00000018296	tsen54	99	59.204	ENSXCOG00000018245	tsen54	97	59.305	Xiphophorus_couchianus
ENSHBUG00000018296	tsen54	92	67.965	ENSXMAG00000018818	tsen54	90	67.965	Xiphophorus_maculatus