EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018397 (Gene tree)
Gene ID: 102305549
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 10078 bases
Position: chrJH425352.1:1672211-1682288
Accession: 102305549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032229	MMR_HSR1	PF01926.23	7.7e-06	1	1
ENSHBUP00000032222	MMR_HSR1	PF01926.23	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024964	-	2982	XM_005919567	ENSHBUP00000032229	185 (aa)	XP_005919629	UPI0003BD7375
ENSHBUT00000024952	-	2749	XM_005919566	ENSHBUP00000032222	198 (aa)	XP_005919628	UPI0003298CCC

Gene Model

Click here to download ENSHBUG00000018397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018397	-	63	36.885	ENSHBUG00000007873	-	61	36.885
ENSHBUG00000018397	-	78	33.793	ENSHBUG00000014610	arl8bb	73	33.793
ENSHBUG00000018397	-	70	33.588	ENSHBUG00000023185	-	70	34.375
ENSHBUG00000018397	-	100	84.848	ENSHBUG00000000915	sar1b	100	84.848
ENSHBUG00000018397	-	76	33.333	ENSHBUG00000007301	arl5c	79	33.333
ENSHBUG00000018397	-	94	30.108	ENSHBUG00000004652	-	96	30.108
ENSHBUG00000018397	-	65	34.167	ENSHBUG00000008546	arf5	67	34.167
ENSHBUG00000018397	-	89	32.222	ENSHBUG00000002834	-	90	32.222
ENSHBUG00000018397	-	92	32.240	ENSHBUG00000010636	arl1	93	32.240
ENSHBUG00000018397	-	62	37.815	ENSHBUG00000012803	arl4aa	60	37.815
ENSHBUG00000018397	-	69	33.588	ENSHBUG00000001159	arl14	65	33.588
ENSHBUG00000018397	-	94	30.108	ENSHBUG00000008446	arf3b	96	30.108
ENSHBUG00000018397	-	74	32.353	ENSHBUG00000009050	arl8	81	32.353
ENSHBUG00000018397	-	78	33.793	ENSHBUG00000002201	arl8ba	73	33.793
ENSHBUG00000018397	-	76	35.616	ENSHBUG00000002490	arl4cb	74	35.135
ENSHBUG00000018397	-	91	32.065	ENSHBUG00000008630	-	96	32.065
ENSHBUG00000018397	-	100	78.283	ENSHBUG00000021221	sar1ab	100	78.283
ENSHBUG00000018397	-	78	32.432	ENSHBUG00000002695	ARL6	87	32.432
ENSHBUG00000018397	-	87	31.214	ENSHBUG00000011041	-	89	31.214
ENSHBUG00000018397	-	63	36.364	ENSHBUG00000005802	arl4d	60	36.364
ENSHBUG00000018397	-	78	33.103	ENSHBUG00000000964	arl8a	73	33.103
ENSHBUG00000018397	-	87	30.233	ENSHBUG00000000803	arl3	88	30.233
ENSHBUG00000018397	-	74	33.803	ENSHBUG00000002903	arl3l2	76	33.803
ENSHBUG00000018397	-	94	31.551	ENSHBUG00000003654	arf2b	96	31.551
ENSHBUG00000018397	-	77	35.135	ENSHBUG00000009561	-	74	35.135
ENSHBUG00000018397	-	86	33.708	ENSHBUG00000013721	-	82	33.708
ENSHBUG00000018397	-	88	31.429	ENSHBUG00000001250	-	91	31.429
ENSHBUG00000018397	-	88	31.429	ENSHBUG00000002636	-	91	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018397	-	100	84.343	ENSAPOG00000007186	sar1b	100	84.343	Acanthochromis_polyacanthus
ENSHBUG00000018397	-	100	97.980	ENSAPOG00000017891	-	100	97.980	Acanthochromis_polyacanthus
ENSHBUG00000018397	-	100	85.354	ENSACIG00000013634	sar1b	100	85.354	Amphilophus_citrinellus
ENSHBUG00000018397	-	100	98.485	ENSACIG00000024513	-	100	98.485	Amphilophus_citrinellus
ENSHBUG00000018397	-	100	97.980	ENSAOCG00000002627	-	100	97.980	Amphiprion_ocellaris
ENSHBUG00000018397	-	100	83.838	ENSAOCG00000005888	sar1b	100	83.838	Amphiprion_ocellaris
ENSHBUG00000018397	-	100	97.980	ENSAPEG00000019680	-	100	97.980	Amphiprion_percula
ENSHBUG00000018397	-	100	83.838	ENSAPEG00000022771	sar1b	100	83.838	Amphiprion_percula
ENSHBUG00000018397	-	100	82.828	ENSATEG00000012904	sar1b	100	82.828	Anabas_testudineus
ENSHBUG00000018397	-	100	94.949	ENSATEG00000023368	-	100	94.949	Anabas_testudineus
ENSHBUG00000018397	-	100	83.838	ENSACAG00000001470	-	100	83.838	Anolis_carolinensis
ENSHBUG00000018397	-	100	84.848	ENSACLG00000014649	sar1b	100	84.848	Astatotilapia_calliptera
ENSHBUG00000018397	-	100	100.000	ENSACLG00000005011	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000018397	-	63	90.598	ENSAMXG00000018108	sar1b	84	90.598	Astyanax_mexicanus
ENSHBUG00000018397	-	100	89.394	ENSAMXG00000034192	-	91	89.394	Astyanax_mexicanus
ENSHBUG00000018397	-	100	92.424	ENSCSEG00000016976	-	100	92.424	Cynoglossus_semilaevis
ENSHBUG00000018397	-	100	79.798	ENSCSEG00000015238	sar1b	97	79.798	Cynoglossus_semilaevis
ENSHBUG00000018397	-	100	86.364	ENSCVAG00000022959	sar1b	100	86.364	Cyprinodon_variegatus
ENSHBUG00000018397	-	100	85.859	ENSDARG00000103403	sar1b	100	85.859	Danio_rerio
ENSHBUG00000018397	-	99	68.878	FBgn0038947	Sar1	99	68.878	Drosophila_melanogaster
ENSHBUG00000018397	-	97	80.729	ENSEBUG00000011723	sar1b	97	80.729	Eptatretus_burgeri
ENSHBUG00000018397	-	100	86.869	ENSELUG00000020912	sar1b	100	86.869	Esox_lucius
ENSHBUG00000018397	-	100	85.354	ENSFHEG00000019865	sar1b	100	85.354	Fundulus_heteroclitus
ENSHBUG00000018397	-	100	85.354	ENSGMOG00000008023	sar1b	100	85.354	Gadus_morhua
ENSHBUG00000018397	-	100	83.838	ENSGAFG00000007081	sar1b	100	83.838	Gambusia_affinis
ENSHBUG00000018397	-	100	82.323	ENSGACG00000001474	sar1b	100	82.323	Gasterosteus_aculeatus
ENSHBUG00000018397	-	100	83.838	ENSHCOG00000010953	sar1b	100	83.838	Hippocampus_comes
ENSHBUG00000018397	-	100	84.343	ENSIPUG00000020925	sar1b	100	84.343	Ictalurus_punctatus
ENSHBUG00000018397	-	100	88.384	ENSIPUG00000010046	sar1b	100	88.384	Ictalurus_punctatus
ENSHBUG00000018397	-	100	90.909	ENSKMAG00000014875	-	100	90.909	Kryptolebias_marmoratus
ENSHBUG00000018397	-	100	84.343	ENSKMAG00000019693	sar1b	100	84.343	Kryptolebias_marmoratus
ENSHBUG00000018397	-	100	97.475	ENSLBEG00000016945	-	100	97.475	Labrus_bergylta
ENSHBUG00000018397	-	100	81.313	ENSLBEG00000027550	sar1b	100	81.313	Labrus_bergylta
ENSHBUG00000018397	-	100	81.313	ENSLACG00000010795	sar1b	100	81.313	Latimeria_chalumnae
ENSHBUG00000018397	-	100	67.839	ENSLACG00000017029	-	100	67.839	Latimeria_chalumnae
ENSHBUG00000018397	-	100	85.859	ENSLOCG00000010197	sar1b	100	85.859	Lepisosteus_oculatus
ENSHBUG00000018397	-	100	87.879	ENSLOCG00000005214	-	100	87.879	Lepisosteus_oculatus
ENSHBUG00000018397	-	100	83.838	ENSMAMG00000021732	sar1b	100	83.838	Mastacembelus_armatus
ENSHBUG00000018397	-	100	84.848	ENSMZEG00005008942	sar1b	100	84.848	Maylandia_zebra
ENSHBUG00000018397	-	100	100.000	ENSMZEG00005001012	-	100	100.000	Maylandia_zebra
ENSHBUG00000018397	-	90	86.034	ENSMGAG00000005387	-	91	86.034	Meleagris_gallopavo
ENSHBUG00000018397	-	100	95.960	ENSMMOG00000013803	-	100	95.960	Mola_mola
ENSHBUG00000018397	-	100	83.333	ENSMALG00000016635	sar1b	97	82.418	Monopterus_albus
ENSHBUG00000018397	-	100	99.495	ENSNBRG00000014004	-	100	99.495	Neolamprologus_brichardi
ENSHBUG00000018397	-	100	84.848	ENSNBRG00000008013	sar1b	100	84.848	Neolamprologus_brichardi
ENSHBUG00000018397	-	100	84.848	ENSONIG00000017278	sar1b	100	84.848	Oreochromis_niloticus
ENSHBUG00000018397	-	100	85.354	ENSORLG00000000932	sar1b	100	85.354	Oryzias_latipes
ENSHBUG00000018397	-	100	85.354	ENSORLG00020021985	sar1b	100	85.354	Oryzias_latipes_hni
ENSHBUG00000018397	-	100	85.354	ENSORLG00015007044	sar1b	100	85.354	Oryzias_latipes_hsok
ENSHBUG00000018397	-	100	83.838	ENSOMEG00000001052	sar1b	100	83.838	Oryzias_melastigma
ENSHBUG00000018397	-	100	83.838	ENSPKIG00000010688	sar1b	100	83.838	Paramormyrops_kingsleyae
ENSHBUG00000018397	-	100	86.364	ENSPKIG00000017353	-	100	86.364	Paramormyrops_kingsleyae
ENSHBUG00000018397	-	63	88.793	ENSPMGG00000001234	sar1b	91	88.793	Periophthalmus_magnuspinnatus
ENSHBUG00000018397	-	100	80.597	ENSPMAG00000003593	sar1b	100	80.597	Petromyzon_marinus
ENSHBUG00000018397	-	100	83.838	ENSPFOG00000005666	sar1b	100	83.838	Poecilia_formosa
ENSHBUG00000018397	-	63	92.308	ENSPLAG00000001016	-	75	92.308	Poecilia_latipinna
ENSHBUG00000018397	-	100	84.343	ENSPLAG00000012223	sar1b	100	84.343	Poecilia_latipinna
ENSHBUG00000018397	-	100	83.838	ENSPMEG00000016831	sar1b	100	83.838	Poecilia_mexicana
ENSHBUG00000018397	-	64	91.525	ENSPREG00000002020	-	87	91.525	Poecilia_reticulata
ENSHBUG00000018397	-	100	83.838	ENSPREG00000005312	sar1b	90	83.838	Poecilia_reticulata
ENSHBUG00000018397	-	100	99.495	ENSPNYG00000021357	-	100	99.495	Pundamilia_nyererei
ENSHBUG00000018397	-	100	84.848	ENSPNYG00000012440	sar1b	100	84.848	Pundamilia_nyererei
ENSHBUG00000018397	-	100	86.364	ENSPNAG00000014683	sar1b	100	86.364	Pygocentrus_nattereri
ENSHBUG00000018397	-	100	90.404	ENSPNAG00000001123	-	100	90.404	Pygocentrus_nattereri
ENSHBUG00000018397	-	100	86.364	ENSSFOG00015018128	-	100	86.364	Scleropages_formosus
ENSHBUG00000018397	-	100	86.869	ENSSFOG00015020051	sar1b	100	86.869	Scleropages_formosus
ENSHBUG00000018397	-	100	81.313	ENSSMAG00000007106	sar1b	80	81.313	Scophthalmus_maximus
ENSHBUG00000018397	-	100	94.444	ENSSMAG00000002165	-	100	94.444	Scophthalmus_maximus
ENSHBUG00000018397	-	100	97.980	ENSSDUG00000019629	-	100	97.980	Seriola_dumerili
ENSHBUG00000018397	-	100	84.848	ENSSDUG00000020926	sar1b	100	84.848	Seriola_dumerili
ENSHBUG00000018397	-	100	97.980	ENSSLDG00000024197	-	100	97.980	Seriola_lalandi_dorsalis
ENSHBUG00000018397	-	100	84.848	ENSSLDG00000017052	sar1b	94	91.667	Seriola_lalandi_dorsalis
ENSHBUG00000018397	-	100	83.838	ENSSPUG00000010247	-	100	83.838	Sphenodon_punctatus
ENSHBUG00000018397	-	100	97.980	ENSSPAG00000015626	-	100	97.980	Stegastes_partitus
ENSHBUG00000018397	-	100	84.848	ENSSPAG00000017634	sar1b	100	84.848	Stegastes_partitus
ENSHBUG00000018397	-	100	81.313	ENSTRUG00000023908	sar1b	100	81.313	Takifugu_rubripes
ENSHBUG00000018397	-	100	82.323	ENSTNIG00000016097	sar1b	100	82.323	Tetraodon_nigroviridis
ENSHBUG00000018397	-	90	83.708	ENSXCOG00000004160	sar1b	87	83.708	Xiphophorus_couchianus
ENSHBUG00000018397	-	63	90.598	ENSXCOG00000006154	-	79	90.598	Xiphophorus_couchianus
ENSHBUG00000018397	-	100	83.838	ENSXMAG00000008294	sar1b	100	83.838	Xiphophorus_maculatus