EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018434 (Gene tree)
Gene ID: 102290572
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 18090 bases
Position: chrJH425768.1:126823-144912
Accession: 102290572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	1	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	2	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	3	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	4	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	5	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	6	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	7	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	8	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	9	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	10	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	11	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	12	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	13	14
ENSHBUP00000016435	KH_1	PF00013.29	2.1e-184	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000024958	-	4018	XM_005945250	ENSHBUP00000016435	1268 (aa)	XP_005945312	UPI0003BC985D

Gene Model

Click here to download ENSHBUG00000018434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018434	hdlbpb	100	71.406	ENSHBUG00000001136	hdlbpa	100	71.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018434	hdlbpb	100	97.240	ENSAPOG00000006904	hdlbpb	100	97.240	Acanthochromis_polyacanthus
ENSHBUG00000018434	hdlbpb	100	92.936	ENSACIG00000016154	hdlbpb	100	93.250	Amphilophus_citrinellus
ENSHBUG00000018434	hdlbpb	100	97.792	ENSAOCG00000004083	hdlbpb	100	97.792	Amphiprion_ocellaris
ENSHBUG00000018434	hdlbpb	100	97.713	ENSAPEG00000012270	hdlbpb	100	97.713	Amphiprion_percula
ENSHBUG00000018434	hdlbpb	100	96.215	ENSATEG00000019877	hdlbpb	100	96.215	Anabas_testudineus
ENSHBUG00000018434	hdlbpb	100	81.861	ENSACAG00000003606	-	100	81.861	Anolis_carolinensis
ENSHBUG00000018434	hdlbpb	100	99.842	ENSACLG00000006618	hdlbpb	100	99.842	Astatotilapia_calliptera
ENSHBUG00000018434	hdlbpb	100	78.049	ENSAMXG00000019946	hdlbpb	100	78.049	Astyanax_mexicanus
ENSHBUG00000018434	hdlbpb	100	95.584	ENSCSEG00000000955	hdlbpb	100	95.584	Cynoglossus_semilaevis
ENSHBUG00000018434	hdlbpb	100	95.347	ENSCVAG00000005345	hdlbpb	100	95.347	Cyprinodon_variegatus
ENSHBUG00000018434	hdlbpb	99	85.320	ENSDARG00000061864	hdlbpb	99	85.241	Danio_rerio
ENSHBUG00000018434	hdlbpb	92	70.256	ENSEBUG00000005304	hdlbpb	94	71.055	Eptatretus_burgeri
ENSHBUG00000018434	hdlbpb	100	78.397	ENSELUG00000019925	hdlbpb	100	78.397	Esox_lucius
ENSHBUG00000018434	hdlbpb	87	34.291	ENSFHEG00000001701	hdlbpb	100	90.379	Fundulus_heteroclitus
ENSHBUG00000018434	hdlbpb	95	87.204	ENSGMOG00000004522	hdlbpb	78	87.204	Gadus_morhua
ENSHBUG00000018434	hdlbpb	100	95.505	ENSGAFG00000005278	hdlbpb	100	95.505	Gambusia_affinis
ENSHBUG00000018434	hdlbpb	99	92.107	ENSGACG00000019361	hdlbpb	100	92.107	Gasterosteus_aculeatus
ENSHBUG00000018434	hdlbpb	100	85.354	ENSIPUG00000003291	HDLBP	100	85.702	Ictalurus_punctatus
ENSHBUG00000018434	hdlbpb	100	96.215	ENSKMAG00000016562	hdlbpb	100	96.215	Kryptolebias_marmoratus
ENSHBUG00000018434	hdlbpb	100	96.293	ENSLBEG00000027855	hdlbpb	100	96.293	Labrus_bergylta
ENSHBUG00000018434	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	90	84.960	Latimeria_chalumnae
ENSHBUG00000018434	hdlbpb	100	82.979	ENSLOCG00000013909	hdlbpb	100	82.979	Lepisosteus_oculatus
ENSHBUG00000018434	hdlbpb	100	97.003	ENSMAMG00000003035	hdlbpb	100	97.003	Mastacembelus_armatus
ENSHBUG00000018434	hdlbpb	100	99.842	ENSMZEG00005021465	hdlbpb	100	99.842	Maylandia_zebra
ENSHBUG00000018434	hdlbpb	100	94.716	ENSMMOG00000012525	hdlbpb	100	94.716	Mola_mola
ENSHBUG00000018434	hdlbpb	100	94.637	ENSMALG00000008938	hdlbpb	100	94.637	Monopterus_albus
ENSHBUG00000018434	hdlbpb	100	99.685	ENSNBRG00000002236	hdlbpb	100	99.685	Neolamprologus_brichardi
ENSHBUG00000018434	hdlbpb	100	99.369	ENSONIG00000009211	hdlbpb	100	99.369	Oreochromis_niloticus
ENSHBUG00000018434	hdlbpb	100	95.110	ENSORLG00000006581	hdlbpb	100	95.110	Oryzias_latipes
ENSHBUG00000018434	hdlbpb	100	95.110	ENSORLG00020010012	hdlbpb	100	95.110	Oryzias_latipes_hni
ENSHBUG00000018434	hdlbpb	100	95.347	ENSORLG00015006863	hdlbpb	100	95.347	Oryzias_latipes_hsok
ENSHBUG00000018434	hdlbpb	100	95.189	ENSOMEG00000011131	hdlbpb	100	95.189	Oryzias_melastigma
ENSHBUG00000018434	hdlbpb	100	88.644	ENSPKIG00000005966	hdlbpb	100	88.644	Paramormyrops_kingsleyae
ENSHBUG00000018434	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSHBUG00000018434	hdlbpb	94	74.890	ENSPMAG00000002131	hdlbpb	100	74.890	Petromyzon_marinus
ENSHBUG00000018434	hdlbpb	92	64.901	ENSPMAG00000000249	-	99	64.744	Petromyzon_marinus
ENSHBUG00000018434	hdlbpb	100	94.774	ENSPFOG00000008755	hdlbpb	100	94.774	Poecilia_formosa
ENSHBUG00000018434	hdlbpb	100	95.820	ENSPLAG00000007055	hdlbpb	100	95.820	Poecilia_latipinna
ENSHBUG00000018434	hdlbpb	100	95.741	ENSPMEG00000001952	hdlbpb	100	95.741	Poecilia_mexicana
ENSHBUG00000018434	hdlbpb	100	95.899	ENSPREG00000012848	hdlbpb	100	95.899	Poecilia_reticulata
ENSHBUG00000018434	hdlbpb	100	99.527	ENSPNYG00000022467	hdlbpb	100	99.527	Pundamilia_nyererei
ENSHBUG00000018434	hdlbpb	100	87.461	ENSPNAG00000011104	hdlbpb	100	87.461	Pygocentrus_nattereri
ENSHBUG00000018434	hdlbpb	100	87.934	ENSSFOG00015023199	hdlbpb	100	87.934	Scleropages_formosus
ENSHBUG00000018434	hdlbpb	100	96.688	ENSSMAG00000008790	hdlbpb	100	96.688	Scophthalmus_maximus
ENSHBUG00000018434	hdlbpb	100	97.476	ENSSDUG00000020694	hdlbpb	100	97.476	Seriola_dumerili
ENSHBUG00000018434	hdlbpb	100	97.003	ENSSLDG00000020807	hdlbpb	100	97.003	Seriola_lalandi_dorsalis
ENSHBUG00000018434	hdlbpb	100	82.492	ENSSPUG00000018688	-	100	82.492	Sphenodon_punctatus
ENSHBUG00000018434	hdlbpb	100	97.634	ENSSPAG00000016969	hdlbpb	100	97.634	Stegastes_partitus
ENSHBUG00000018434	hdlbpb	98	92.795	ENSTRUG00000012888	hdlbpb	99	92.716	Takifugu_rubripes
ENSHBUG00000018434	hdlbpb	99	93.735	ENSTNIG00000002555	hdlbpb	100	93.735	Tetraodon_nigroviridis
ENSHBUG00000018434	hdlbpb	100	83.751	ENSXCOG00000001797	hdlbpb	100	83.751	Xiphophorus_couchianus
ENSHBUG00000018434	hdlbpb	100	95.268	ENSXMAG00000015633	hdlbpb	100	95.268	Xiphophorus_maculatus