EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000018469 (Gene tree)
Gene ID: 102301876
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 20274 bases
Position: chrJH425330.1:1425559-1445832
Accession: 102301876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032285	Urb2	PF10441.9	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034240	-	8085	-	ENSHBUP00000016513	1495 (aa)	-	-
ENSHBUT00000025073	-	6034	XM_005915074	ENSHBUP00000032285	1651 (aa)	XP_005915136	UPI0003BD2928

Gene Model

Click here to download ENSHBUG00000018469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018469	urb2	99	35.419	ENSG00000135763	URB2	99	60.714	Homo_sapiens
ENSHBUG00000018469	urb2	91	71.912	ENSAPOG00000000608	urb2	100	71.912	Acanthochromis_polyacanthus
ENSHBUG00000018469	urb2	100	35.350	ENSAMEG00000009206	URB2	100	35.528	Ailuropoda_melanoleuca
ENSHBUG00000018469	urb2	100	73.637	ENSAOCG00000019961	urb2	100	73.637	Amphiprion_ocellaris
ENSHBUG00000018469	urb2	100	73.756	ENSAPEG00000005263	urb2	100	73.756	Amphiprion_percula
ENSHBUG00000018469	urb2	100	69.045	ENSATEG00000020930	urb2	100	69.104	Anabas_testudineus
ENSHBUG00000018469	urb2	93	46.341	ENSAPLG00000002998	URB2	99	46.341	Anas_platyrhynchos
ENSHBUG00000018469	urb2	96	55.556	ENSACAG00000001285	URB2	99	55.556	Anolis_carolinensis
ENSHBUG00000018469	urb2	99	35.943	ENSANAG00000033963	URB2	99	35.731	Aotus_nancymaae
ENSHBUG00000018469	urb2	91	98.140	ENSACLG00000009254	urb2	100	98.140	Astatotilapia_calliptera
ENSHBUG00000018469	urb2	99	41.932	ENSAMXG00000003474	urb2	99	41.881	Astyanax_mexicanus
ENSHBUG00000018469	urb2	96	53.704	ENSBTAG00000010180	URB2	99	53.704	Bos_taurus
ENSHBUG00000018469	urb2	95	61.429	ENSCJAG00000010968	URB2	99	61.429	Callithrix_jacchus
ENSHBUG00000018469	urb2	96	51.852	ENSCAFG00000012118	URB2	99	51.852	Canis_familiaris
ENSHBUG00000018469	urb2	87	34.223	ENSCAFG00020027217	URB2	95	34.405	Canis_lupus_dingo
ENSHBUG00000018469	urb2	96	53.704	ENSCHIG00000014513	URB2	99	53.704	Capra_hircus
ENSHBUG00000018469	urb2	100	36.073	ENSTSYG00000006924	URB2	100	36.261	Carlito_syrichta
ENSHBUG00000018469	urb2	63	39.899	ENSCPOG00000020777	-	99	39.277	Cavia_porcellus
ENSHBUG00000018469	urb2	99	36.450	ENSCCAG00000023932	URB2	99	36.353	Cebus_capucinus
ENSHBUG00000018469	urb2	99	35.621	ENSCATG00000043366	URB2	99	35.680	Cercocebus_atys
ENSHBUG00000018469	urb2	97	51.235	ENSCLAG00000006268	URB2	99	51.235	Chinchilla_lanigera
ENSHBUG00000018469	urb2	99	35.621	ENSCSAG00000010599	URB2	99	35.680	Chlorocebus_sabaeus
ENSHBUG00000018469	urb2	70	41.853	ENSCHOG00000010163	URB2	70	41.853	Choloepus_hoffmanni
ENSHBUG00000018469	urb2	99	38.168	ENSCPBG00000006191	URB2	99	38.036	Chrysemys_picta_bellii
ENSHBUG00000018469	urb2	97	53.086	ENSCANG00000023711	URB2	99	53.086	Colobus_angolensis_palliatus
ENSHBUG00000018469	urb2	96	51.852	ENSCGRG00001009591	Urb2	99	51.852	Cricetulus_griseus_chok1gshd
ENSHBUG00000018469	urb2	96	51.852	ENSCGRG00000011259	Urb2	99	51.852	Cricetulus_griseus_crigri
ENSHBUG00000018469	urb2	100	54.083	ENSCSEG00000000299	urb2	100	54.083	Cynoglossus_semilaevis
ENSHBUG00000018469	urb2	100	61.285	ENSCVAG00000011011	urb2	100	61.285	Cyprinodon_variegatus
ENSHBUG00000018469	urb2	100	42.806	ENSDARG00000003217	urb2	100	68.932	Danio_rerio
ENSHBUG00000018469	urb2	98	32.403	ENSDNOG00000043064	URB2	99	32.568	Dasypus_novemcinctus
ENSHBUG00000018469	urb2	97	51.852	ENSDORG00000014975	Urb2	99	51.852	Dipodomys_ordii
ENSHBUG00000018469	urb2	95	41.135	ENSETEG00000002869	URB2	95	41.135	Echinops_telfairi
ENSHBUG00000018469	urb2	100	35.816	ENSEASG00005012060	URB2	100	36.052	Equus_asinus_asinus
ENSHBUG00000018469	urb2	93	61.538	ENSECAG00000012338	URB2	100	61.538	Equus_caballus
ENSHBUG00000018469	urb2	92	56.028	ENSEEUG00000002669	URB2	92	56.028	Erinaceus_europaeus
ENSHBUG00000018469	urb2	100	49.136	ENSELUG00000014647	urb2	100	49.136	Esox_lucius
ENSHBUG00000018469	urb2	96	53.086	ENSFCAG00000007662	URB2	99	53.086	Felis_catus
ENSHBUG00000018469	urb2	96	50.000	ENSFALG00000003385	URB2	99	50.000	Ficedula_albicollis
ENSHBUG00000018469	urb2	99	35.541	ENSFDAG00000021079	URB2	99	35.981	Fukomys_damarensis
ENSHBUG00000018469	urb2	100	61.423	ENSFHEG00000010357	urb2	100	61.543	Fundulus_heteroclitus
ENSHBUG00000018469	urb2	96	68.902	ENSGMOG00000012459	urb2	100	68.902	Gadus_morhua
ENSHBUG00000018469	urb2	96	54.268	ENSGALG00000011101	URB2	99	54.268	Gallus_gallus
ENSHBUG00000018469	urb2	97	74.545	ENSGACG00000016179	urb2	100	74.545	Gasterosteus_aculeatus
ENSHBUG00000018469	urb2	96	57.927	ENSGAGG00000021879	URB2	99	57.927	Gopherus_agassizii
ENSHBUG00000018469	urb2	99	35.322	ENSGGOG00000025643	URB2	99	35.385	Gorilla_gorilla
ENSHBUG00000018469	urb2	97	34.441	ENSHGLG00000016561	URB2	99	34.949	Heterocephalus_glaber_female
ENSHBUG00000018469	urb2	96	51.613	ENSHGLG00100001838	URB2	97	51.613	Heterocephalus_glaber_male
ENSHBUG00000018469	urb2	100	41.702	ENSIPUG00000020315	urb2	100	41.532	Ictalurus_punctatus
ENSHBUG00000018469	urb2	99	35.146	ENSSTOG00000025323	URB2	99	35.484	Ictidomys_tridecemlineatus
ENSHBUG00000018469	urb2	97	51.852	ENSJJAG00000011998	Urb2	99	51.852	Jaculus_jaculus
ENSHBUG00000018469	urb2	100	64.524	ENSKMAG00000020129	urb2	100	64.583	Kryptolebias_marmoratus
ENSHBUG00000018469	urb2	99	37.500	ENSLACG00000002038	URB2	99	37.581	Latimeria_chalumnae
ENSHBUG00000018469	urb2	99	44.172	ENSLOCG00000015462	urb2	99	44.172	Lepisosteus_oculatus
ENSHBUG00000018469	urb2	97	51.852	ENSLAFG00000012484	URB2	100	34.946	Loxodonta_africana
ENSHBUG00000018469	urb2	99	35.562	ENSMFAG00000039905	URB2	99	35.621	Macaca_fascicularis
ENSHBUG00000018469	urb2	99	35.621	ENSMMUG00000009509	URB2	99	35.680	Macaca_mulatta
ENSHBUG00000018469	urb2	99	35.503	ENSMNEG00000038762	URB2	99	35.562	Macaca_nemestrina
ENSHBUG00000018469	urb2	99	35.740	ENSMLEG00000043252	URB2	99	35.799	Mandrillus_leucophaeus
ENSHBUG00000018469	urb2	100	64.193	ENSMAMG00000020365	urb2	100	64.193	Mastacembelus_armatus
ENSHBUG00000018469	urb2	100	98.243	ENSMZEG00005011027	urb2	100	98.243	Maylandia_zebra
ENSHBUG00000018469	urb2	86	36.016	ENSMGAG00000012073	URB2	95	36.134	Meleagris_gallopavo
ENSHBUG00000018469	urb2	92	58.865	ENSMAUG00000017980	Urb2	99	58.865	Mesocricetus_auratus
ENSHBUG00000018469	urb2	97	54.545	ENSMICG00000033302	URB2	100	54.545	Microcebus_murinus
ENSHBUG00000018469	urb2	97	53.086	ENSMOCG00000020369	Urb2	99	53.086	Microtus_ochrogaster
ENSHBUG00000018469	urb2	100	68.142	ENSMALG00000006529	urb2	100	68.142	Monopterus_albus
ENSHBUG00000018469	urb2	97	51.235	ENSMUSG00000031976	Urb2	99	51.235	Mus_musculus
ENSHBUG00000018469	urb2	99	35.969	ENSMPUG00000012438	URB2	99	36.033	Mustela_putorius_furo
ENSHBUG00000018469	urb2	99	34.677	ENSNGAG00000016524	Urb2	99	34.837	Nannospalax_galili
ENSHBUG00000018469	urb2	99	35.215	ENSNLEG00000014450	URB2	99	35.332	Nomascus_leucogenys
ENSHBUG00000018469	urb2	86	47.541	ENSMEUG00000016434	URB2	92	47.541	Notamacropus_eugenii
ENSHBUG00000018469	urb2	85	76.190	ENSOPRG00000009906	URB2	84	76.190	Ochotona_princeps
ENSHBUG00000018469	urb2	97	51.235	ENSODEG00000005593	URB2	99	51.235	Octodon_degus
ENSHBUG00000018469	urb2	97	95.294	ENSONIG00000017078	urb2	100	95.294	Oreochromis_niloticus
ENSHBUG00000018469	urb2	95	51.250	ENSOANG00000013732	URB2	99	33.654	Ornithorhynchus_anatinus
ENSHBUG00000018469	urb2	97	52.469	ENSOCUG00000010700	URB2	100	35.413	Oryctolagus_cuniculus
ENSHBUG00000018469	urb2	100	61.823	ENSORLG00000010915	urb2	100	61.942	Oryzias_latipes
ENSHBUG00000018469	urb2	100	62.001	ENSORLG00020003361	urb2	100	62.001	Oryzias_latipes_hni
ENSHBUG00000018469	urb2	100	61.703	ENSORLG00015001534	urb2	100	61.703	Oryzias_latipes_hsok
ENSHBUG00000018469	urb2	100	62.112	ENSOMEG00000010076	urb2	100	62.291	Oryzias_melastigma
ENSHBUG00000018469	urb2	97	51.829	ENSOGAG00000003021	URB2	100	51.829	Otolemur_garnettii
ENSHBUG00000018469	urb2	96	53.704	ENSOARG00000003102	URB2	99	53.704	Ovis_aries
ENSHBUG00000018469	urb2	99	35.342	ENSPPAG00000040629	URB2	99	35.501	Pan_paniscus
ENSHBUG00000018469	urb2	96	53.086	ENSPPRG00000012767	URB2	99	53.086	Panthera_pardus
ENSHBUG00000018469	urb2	89	72.727	ENSPTIG00000012577	URB2	96	72.727	Panthera_tigris_altaica
ENSHBUG00000018469	urb2	99	35.322	ENSPTRG00000002092	URB2	99	35.385	Pan_troglodytes
ENSHBUG00000018469	urb2	99	34.574	ENSPANG00000002245	URB2	99	34.634	Papio_anubis
ENSHBUG00000018469	urb2	96	56.024	ENSPKIG00000005787	urb2	99	56.024	Paramormyrops_kingsleyae
ENSHBUG00000018469	urb2	99	36.969	ENSPSIG00000002690	URB2	99	37.013	Pelodiscus_sinensis
ENSHBUG00000018469	urb2	93	51.852	ENSPEMG00000019551	Urb2	100	51.852	Peromyscus_maniculatus_bairdii
ENSHBUG00000018469	urb2	96	54.375	ENSPCIG00000030071	URB2	99	54.375	Phascolarctos_cinereus
ENSHBUG00000018469	urb2	100	61.502	ENSPFOG00000014330	urb2	100	61.441	Poecilia_formosa
ENSHBUG00000018469	urb2	100	61.418	ENSPLAG00000014654	urb2	100	61.358	Poecilia_latipinna
ENSHBUG00000018469	urb2	100	61.922	ENSPMEG00000012356	urb2	100	61.742	Poecilia_mexicana
ENSHBUG00000018469	urb2	100	61.285	ENSPREG00000010268	urb2	100	61.224	Poecilia_reticulata
ENSHBUG00000018469	urb2	96	53.704	ENSPPYG00000000123	URB2	99	53.704	Pongo_abelii
ENSHBUG00000018469	urb2	100	35.612	ENSPCOG00000023537	URB2	100	35.638	Propithecus_coquereli
ENSHBUG00000018469	urb2	99	33.254	ENSPVAG00000002108	URB2	99	33.234	Pteropus_vampyrus
ENSHBUG00000018469	urb2	91	98.870	ENSPNYG00000016840	urb2	100	98.870	Pundamilia_nyererei
ENSHBUG00000018469	urb2	96	56.098	ENSPNAG00000013684	urb2	99	56.098	Pygocentrus_nattereri
ENSHBUG00000018469	urb2	97	53.086	ENSRNOG00000026853	Urb2	97	53.086	Rattus_norvegicus
ENSHBUG00000018469	urb2	99	35.524	ENSRBIG00000037937	URB2	99	35.528	Rhinopithecus_bieti
ENSHBUG00000018469	urb2	99	35.524	ENSRROG00000039854	URB2	99	35.655	Rhinopithecus_roxellana
ENSHBUG00000018469	urb2	99	35.702	ENSSBOG00000023055	URB2	99	35.604	Saimiri_boliviensis_boliviensis
ENSHBUG00000018469	urb2	96	54.037	ENSSHAG00000014735	URB2	99	54.037	Sarcophilus_harrisii
ENSHBUG00000018469	urb2	98	41.295	ENSSFOG00015015432	urb2	98	41.544	Scleropages_formosus
ENSHBUG00000018469	urb2	91	65.747	ENSSMAG00000004984	urb2	100	65.619	Scophthalmus_maximus
ENSHBUG00000018469	urb2	100	71.111	ENSSDUG00000000902	urb2	100	71.287	Seriola_dumerili
ENSHBUG00000018469	urb2	96	55.488	ENSSPUG00000018549	URB2	99	55.488	Sphenodon_punctatus
ENSHBUG00000018469	urb2	100	72.663	ENSSPAG00000013632	urb2	100	72.544	Stegastes_partitus
ENSHBUG00000018469	urb2	100	35.908	ENSSSCG00000010186	URB2	100	35.908	Sus_scrofa
ENSHBUG00000018469	urb2	96	50.617	ENSTGUG00000009990	URB2	99	50.617	Taeniopygia_guttata
ENSHBUG00000018469	urb2	100	59.656	ENSTRUG00000008173	urb2	100	59.656	Takifugu_rubripes
ENSHBUG00000018469	urb2	91	72.727	ENSTNIG00000017689	urb2	98	72.727	Tetraodon_nigroviridis
ENSHBUG00000018469	urb2	92	76.190	ENSTTRG00000014864	URB2	95	76.190	Tursiops_truncatus
ENSHBUG00000018469	urb2	96	51.553	ENSUAMG00000015022	URB2	99	51.553	Ursus_americanus
ENSHBUG00000018469	urb2	96	51.553	ENSUMAG00000004728	URB2	99	51.553	Ursus_maritimus
ENSHBUG00000018469	urb2	50	63.043	ENSVPAG00000001750	-	51	63.043	Vicugna_pacos
ENSHBUG00000018469	urb2	96	51.852	ENSVVUG00000006747	URB2	99	51.852	Vulpes_vulpes
ENSHBUG00000018469	urb2	99	33.431	ENSXETG00000023331	urb2	99	33.372	Xenopus_tropicalis
ENSHBUG00000018469	urb2	100	61.008	ENSXMAG00000015059	urb2	100	61.008	Xiphophorus_maculatus