EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018499 (Gene tree)
Gene ID: 102301904
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 15845 bases
Position: chrJH425364.1:402835-418679
Accession: 102301904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000016485	RRM_1	PF00076.22	3.4e-09	1	1
ENSHBUP00000016496	RRM_1	PF00076.22	3.5e-09	1	1
ENSHBUP00000016496	PWI	PF01480.17	1.4e-13	1	1
ENSHBUP00000016485	PWI	PF01480.17	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025042	-	7267	XM_014333343	ENSHBUP00000016496	814 (aa)	XP_014188829	UPI0006C9A718
ENSHBUT00000025021	-	2379	-	ENSHBUP00000016485	792 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000018499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018499	rbm25b	55	78.462	ENSHBUG00000012996	-	100	74.555
ENSHBUG00000018499	rbm25b	55	78.462	ENSHBUG00000016908	rbm25a	57	77.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018499	rbm25b	57	94.004	ENSAPOG00000015321	rbm25b	58	94.004	Acanthochromis_polyacanthus
ENSHBUG00000018499	rbm25b	55	80.131	ENSAPOG00000017757	rbm25a	57	78.481	Acanthochromis_polyacanthus
ENSHBUG00000018499	rbm25b	57	93.148	ENSACIG00000014178	rbm25b	56	92.560	Amphilophus_citrinellus
ENSHBUG00000018499	rbm25b	55	79.295	ENSACIG00000019482	rbm25a	56	76.333	Amphilophus_citrinellus
ENSHBUG00000018499	rbm25b	55	77.802	ENSAOCG00000013695	rbm25a	55	75.610	Amphiprion_ocellaris
ENSHBUG00000018499	rbm25b	55	79.176	ENSAPEG00000007514	rbm25a	57	77.083	Amphiprion_percula
ENSHBUG00000018499	rbm25b	58	92.781	ENSATEG00000017312	rbm25b	57	92.934	Anabas_testudineus
ENSHBUG00000018499	rbm25b	57	79.070	ENSATEG00000020676	rbm25a	63	77.568	Anabas_testudineus
ENSHBUG00000018499	rbm25b	54	75.566	ENSAPLG00000006643	RBM25	55	74.359	Anas_platyrhynchos
ENSHBUG00000018499	rbm25b	92	73.211	ENSACLG00000027482	rbm25a	86	75.054	Astatotilapia_calliptera
ENSHBUG00000018499	rbm25b	100	99.631	ENSACLG00000024359	rbm25b	100	99.631	Astatotilapia_calliptera
ENSHBUG00000018499	rbm25b	51	69.104	ENSAMXG00000024525	rbm25b	61	63.581	Astyanax_mexicanus
ENSHBUG00000018499	rbm25b	55	34.956	WBGene00012245	W04D2.6	86	32.983	Caenorhabditis_elegans
ENSHBUG00000018499	rbm25b	60	94.000	ENSCHOG00000008903	RBM25	60	95.652	Choloepus_hoffmanni
ENSHBUG00000018499	rbm25b	63	62.439	ENSCGRG00001020817	Rbm25	100	63.750	Cricetulus_griseus_chok1gshd
ENSHBUG00000018499	rbm25b	56	75.108	ENSCSEG00000009430	rbm25a	61	71.515	Cynoglossus_semilaevis
ENSHBUG00000018499	rbm25b	59	86.983	ENSCVAG00000003478	rbm25b	57	87.712	Cyprinodon_variegatus
ENSHBUG00000018499	rbm25b	58	69.884	ENSCVAG00000005498	rbm25a	99	72.658	Cyprinodon_variegatus
ENSHBUG00000018499	rbm25b	53	65.982	ENSDARG00000039266	rbm25a	99	93.671	Danio_rerio
ENSHBUG00000018499	rbm25b	58	78.601	ENSELUG00000007730	rbm25b	59	81.600	Esox_lucius
ENSHBUG00000018499	rbm25b	57	65.948	ENSELUG00000021847	rbm25a	52	64.912	Esox_lucius
ENSHBUG00000018499	rbm25b	56	70.690	ENSFHEG00000005318	rbm25a	89	70.161	Fundulus_heteroclitus
ENSHBUG00000018499	rbm25b	57	90.213	ENSFHEG00000003513	rbm25b	59	90.213	Fundulus_heteroclitus
ENSHBUG00000018499	rbm25b	96	61.625	ENSGMOG00000014097	rbm25b	63	79.111	Gadus_morhua
ENSHBUG00000018499	rbm25b	81	71.889	ENSGMOG00000014070	rbm25a	87	70.996	Gadus_morhua
ENSHBUG00000018499	rbm25b	100	71.752	ENSGAFG00000018036	rbm25a	56	73.486	Gambusia_affinis
ENSHBUG00000018499	rbm25b	98	86.364	ENSGAFG00000001092	rbm25b	52	90.456	Gambusia_affinis
ENSHBUG00000018499	rbm25b	100	77.630	ENSHCOG00000000142	rbm25b	57	80.266	Hippocampus_comes
ENSHBUG00000018499	rbm25b	60	71.912	ENSKMAG00000016242	rbm25a	57	77.328	Kryptolebias_marmoratus
ENSHBUG00000018499	rbm25b	56	93.013	ENSKMAG00000018826	rbm25b	57	92.934	Kryptolebias_marmoratus
ENSHBUG00000018499	rbm25b	100	89.939	ENSLBEG00000010667	rbm25b	56	86.081	Labrus_bergylta
ENSHBUG00000018499	rbm25b	53	75.058	ENSMAMG00000000165	rbm25a	60	68.776	Mastacembelus_armatus
ENSHBUG00000018499	rbm25b	100	99.631	ENSMZEG00005001453	rbm25b	100	99.631	Maylandia_zebra
ENSHBUG00000018499	rbm25b	55	78.462	ENSMZEG00005011183	rbm25a	57	77.167	Maylandia_zebra
ENSHBUG00000018499	rbm25b	54	75.566	ENSMGAG00000011707	RBM25	52	74.359	Meleagris_gallopavo
ENSHBUG00000018499	rbm25b	57	76.008	ENSMMOG00000009065	rbm25a	56	74.098	Mola_mola
ENSHBUG00000018499	rbm25b	100	93.668	ENSMMOG00000015545	rbm25b	63	93.118	Mola_mola
ENSHBUG00000018499	rbm25b	58	92.453	ENSMALG00000020441	rbm25b	89	92.964	Monopterus_albus
ENSHBUG00000018499	rbm25b	100	99.621	ENSNBRG00000022192	rbm25b	100	99.621	Neolamprologus_brichardi
ENSHBUG00000018499	rbm25b	55	78.681	ENSNBRG00000003761	rbm25a	57	76.956	Neolamprologus_brichardi
ENSHBUG00000018499	rbm25b	100	61.712	ENSOCUG00000013737	RBM25	86	71.550	Oryctolagus_cuniculus
ENSHBUG00000018499	rbm25b	58	87.924	ENSORLG00000011874	rbm25b	57	88.462	Oryzias_latipes
ENSHBUG00000018499	rbm25b	58	88.136	ENSORLG00020016422	rbm25b	57	88.675	Oryzias_latipes_hni
ENSHBUG00000018499	rbm25b	58	88.136	ENSORLG00015011269	rbm25b	57	88.675	Oryzias_latipes_hsok
ENSHBUG00000018499	rbm25b	71	68.382	ENSORLG00015022499	rbm25a	54	64.416	Oryzias_latipes_hsok
ENSHBUG00000018499	rbm25b	84	69.163	ENSOMEG00000022138	rbm25a	58	73.523	Oryzias_melastigma
ENSHBUG00000018499	rbm25b	57	88.462	ENSOMEG00000023172	rbm25b	57	88.462	Oryzias_melastigma
ENSHBUG00000018499	rbm25b	58	78.105	ENSPKIG00000003203	rbm25b	57	77.754	Paramormyrops_kingsleyae
ENSHBUG00000018499	rbm25b	53	64.186	ENSPMGG00000001791	rbm25a	100	63.575	Periophthalmus_magnuspinnatus
ENSHBUG00000018499	rbm25b	58	87.631	ENSPMGG00000015740	rbm25b	58	86.441	Periophthalmus_magnuspinnatus
ENSHBUG00000018499	rbm25b	57	89.375	ENSPFOG00000018808	rbm25b	58	90.021	Poecilia_formosa
ENSHBUG00000018499	rbm25b	100	63.462	ENSPFOG00000017931	rbm25a	60	69.498	Poecilia_formosa
ENSHBUG00000018499	rbm25b	100	73.150	ENSPLAG00000018338	rbm25a	56	74.843	Poecilia_latipinna
ENSHBUG00000018499	rbm25b	100	73.031	ENSPMEG00000024470	rbm25a	62	69.498	Poecilia_mexicana
ENSHBUG00000018499	rbm25b	57	89.167	ENSPMEG00000019161	rbm25b	58	89.813	Poecilia_mexicana
ENSHBUG00000018499	rbm25b	100	66.185	ENSPREG00000009228	rbm25a	57	75.053	Poecilia_reticulata
ENSHBUG00000018499	rbm25b	57	89.212	ENSPREG00000008522	rbm25b	58	89.855	Poecilia_reticulata
ENSHBUG00000018499	rbm25b	54	66.667	ENSPCAG00000006226	RBM25	79	72.747	Procavia_capensis
ENSHBUG00000018499	rbm25b	100	99.621	ENSPNYG00000023303	rbm25b	100	99.621	Pundamilia_nyererei
ENSHBUG00000018499	rbm25b	57	76.129	ENSPNYG00000022596	rbm25a	54	75.054	Pundamilia_nyererei
ENSHBUG00000018499	rbm25b	61	80.335	ENSSBOG00000034153	RBM25	54	52.980	Saimiri_boliviensis_boliviensis
ENSHBUG00000018499	rbm25b	57	76.383	ENSSFOG00015007093	rbm25	57	75.796	Scleropages_formosus
ENSHBUG00000018499	rbm25b	57	77.637	ENSSMAG00000009745	rbm25a	58	76.793	Scophthalmus_maximus
ENSHBUG00000018499	rbm25b	58	87.891	ENSSMAG00000002520	rbm25b	58	88.110	Scophthalmus_maximus
ENSHBUG00000018499	rbm25b	55	80.744	ENSSDUG00000017984	rbm25a	58	79.070	Seriola_dumerili
ENSHBUG00000018499	rbm25b	56	95.633	ENSSLDG00000024573	rbm25b	100	95.633	Seriola_lalandi_dorsalis
ENSHBUG00000018499	rbm25b	55	80.744	ENSSLDG00000010342	rbm25a	57	79.070	Seriola_lalandi_dorsalis
ENSHBUG00000018499	rbm25b	55	77.825	ENSSPAG00000011114	rbm25a	57	76.446	Stegastes_partitus
ENSHBUG00000018499	rbm25b	57	73.150	ENSTRUG00000003076	rbm25a	60	71.670	Takifugu_rubripes
ENSHBUG00000018499	rbm25b	58	92.751	ENSTRUG00000017964	rbm25b	58	92.934	Takifugu_rubripes
ENSHBUG00000018499	rbm25b	68	79.126	ENSTBEG00000010538	-	64	79.126	Tupaia_belangeri
ENSHBUG00000018499	rbm25b	90	65.401	ENSVPAG00000009052	RBM25	78	73.391	Vicugna_pacos
ENSHBUG00000018499	rbm25b	96	57.791	ENSXETG00000021857	rbm25	56	72.842	Xenopus_tropicalis
ENSHBUG00000018499	rbm25b	100	80.122	ENSXCOG00000002222	rbm25b	56	79.281	Xiphophorus_couchianus
ENSHBUG00000018499	rbm25b	100	71.919	ENSXCOG00000004043	RBM25	57	73.554	Xiphophorus_couchianus
ENSHBUG00000018499	rbm25b	100	86.779	ENSXMAG00000017290	rbm25b	58	89.876	Xiphophorus_maculatus
ENSHBUG00000018499	rbm25b	100	66.350	ENSXMAG00000009077	RBM25	59	71.063	Xiphophorus_maculatus