EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018631 (Gene tree)
Gene ID: 102292609
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7332 bases
Position: chrJH425322.1:4289885-4297216
Accession: 102292609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032371	YTH	PF04146.15	1.4e-39	1	1
ENSHBUP00000032381	YTH	PF04146.15	1.4e-39	1	1
ENSHBUP00000016614	YTH	PF04146.15	1.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025196	-	1713	-	ENSHBUP00000016614	570 (aa)	-	-
ENSHBUT00000025231	-	3750	XM_005912209	ENSHBUP00000032381	607 (aa)	XP_005912271	UPI000329D2CA
ENSHBUT00000025238	-	3685	XM_005912208	ENSHBUP00000032371	607 (aa)	XP_005912270	UPI000329D2CA

Gene Model

Click here to download ENSHBUG00000018631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018631	ythdf3	98	60.848	ENSHBUG00000007355	ythdf2	99	57.610
ENSHBUG00000018631	ythdf3	99	57.820	ENSHBUG00000004875	YTHDF1	97	64.043
ENSHBUG00000018631	ythdf3	97	57.307	ENSHBUG00000011284	ythdf1	98	58.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018631	ythdf3	99	95.724	ENSAPOG00000024006	ythdf3	99	95.724	Acanthochromis_polyacanthus
ENSHBUG00000018631	ythdf3	99	89.180	ENSACIG00000022287	ythdf3	98	89.878	Amphilophus_citrinellus
ENSHBUG00000018631	ythdf3	99	95.724	ENSAOCG00000000723	ythdf3	99	95.724	Amphiprion_ocellaris
ENSHBUG00000018631	ythdf3	99	94.408	ENSAPEG00000020352	ythdf3	51	97.087	Amphiprion_percula
ENSHBUG00000018631	ythdf3	99	91.694	ENSATEG00000011478	ythdf3	98	98.477	Anabas_testudineus
ENSHBUG00000018631	ythdf3	98	67.528	ENSAPLG00000011329	YTHDF3	99	74.958	Anas_platyrhynchos
ENSHBUG00000018631	ythdf3	97	67.370	ENSACAG00000016837	YTHDF3	99	72.277	Anolis_carolinensis
ENSHBUG00000018631	ythdf3	100	99.671	ENSACLG00000026145	ythdf3	100	99.671	Astatotilapia_calliptera
ENSHBUG00000018631	ythdf3	98	81.930	ENSAMXG00000030366	ythdf3	99	80.952	Astyanax_mexicanus
ENSHBUG00000018631	ythdf3	97	66.775	ENSCPBG00000021405	YTHDF3	99	71.334	Chrysemys_picta_bellii
ENSHBUG00000018631	ythdf3	96	74.150	ENSCGRG00000005613	-	98	71.902	Cricetulus_griseus_crigri
ENSHBUG00000018631	ythdf3	63	56.150	ENSCGRG00000008289	-	93	64.530	Cricetulus_griseus_crigri
ENSHBUG00000018631	ythdf3	99	93.103	ENSCSEG00000014861	ythdf3	98	89.502	Cynoglossus_semilaevis
ENSHBUG00000018631	ythdf3	99	91.118	ENSCVAG00000018114	ythdf3	99	87.544	Cyprinodon_variegatus
ENSHBUG00000018631	ythdf3	97	65.645	ENSETEG00000007144	YTHDF3	100	70.875	Echinops_telfairi
ENSHBUG00000018631	ythdf3	97	83.388	ENSELUG00000014824	ythdf3	99	82.616	Esox_lucius
ENSHBUG00000018631	ythdf3	98	67.416	ENSFALG00000005503	YTHDF3	99	74.206	Ficedula_albicollis
ENSHBUG00000018631	ythdf3	99	92.270	ENSFHEG00000016395	ythdf3	85	95.964	Fundulus_heteroclitus
ENSHBUG00000018631	ythdf3	98	73.970	ENSGALG00000039774	YTHDF3	99	77.680	Gallus_gallus
ENSHBUG00000018631	ythdf3	99	91.612	ENSGAFG00000006529	ythdf3	51	93.528	Gambusia_affinis
ENSHBUG00000018631	ythdf3	100	91.626	ENSGACG00000002998	ythdf3	52	95.779	Gasterosteus_aculeatus
ENSHBUG00000018631	ythdf3	97	66.775	ENSGAGG00000003851	YTHDF3	99	73.592	Gopherus_agassizii
ENSHBUG00000018631	ythdf3	97	80.833	ENSIPUG00000014157	YTHDF1	97	75.524	Ictalurus_punctatus
ENSHBUG00000018631	ythdf3	99	91.653	ENSKMAG00000008447	ythdf3	97	96.313	Kryptolebias_marmoratus
ENSHBUG00000018631	ythdf3	99	87.391	ENSLBEG00000017003	ythdf3	98	86.926	Labrus_bergylta
ENSHBUG00000018631	ythdf3	96	87.884	ENSMAMG00000000414	ythdf3	51	89.583	Mastacembelus_armatus
ENSHBUG00000018631	ythdf3	100	100.000	ENSMZEG00005021836	ythdf3	100	100.000	Maylandia_zebra
ENSHBUG00000018631	ythdf3	98	74.338	ENSMGAG00000011168	YTHDF3	99	75.042	Meleagris_gallopavo
ENSHBUG00000018631	ythdf3	62	72.251	ENSMAUG00000012560	Ythdf3	99	71.728	Mesocricetus_auratus
ENSHBUG00000018631	ythdf3	63	55.612	ENSMICG00000009379	-	99	51.407	Microcebus_murinus
ENSHBUG00000018631	ythdf3	92	83.333	ENSMMOG00000003402	ythdf3	98	89.273	Mola_mola
ENSHBUG00000018631	ythdf3	98	79.964	ENSMALG00000000147	ythdf3	99	97.462	Monopterus_albus
ENSHBUG00000018631	ythdf3	97	73.456	MGP_SPRETEiJ_G0025794	Ythdf3	98	71.852	Mus_spretus
ENSHBUG00000018631	ythdf3	97	98.805	ENSNBRG00000023433	ythdf3	100	98.805	Neolamprologus_brichardi
ENSHBUG00000018631	ythdf3	57	76.471	ENSNLEG00000003872	YTHDF3	52	81.818	Nomascus_leucogenys
ENSHBUG00000018631	ythdf3	100	98.682	ENSONIG00000014175	ythdf3	100	98.682	Oreochromis_niloticus
ENSHBUG00000018631	ythdf3	99	91.118	ENSORLG00000008640	ythdf3	99	78.846	Oryzias_latipes
ENSHBUG00000018631	ythdf3	99	90.954	ENSORLG00020014684	ythdf3	99	78.686	Oryzias_latipes_hni
ENSHBUG00000018631	ythdf3	99	91.118	ENSORLG00015014880	ythdf3	99	78.526	Oryzias_latipes_hsok
ENSHBUG00000018631	ythdf3	99	91.283	ENSOMEG00000008212	ythdf3	99	86.018	Oryzias_melastigma
ENSHBUG00000018631	ythdf3	99	81.773	ENSPKIG00000008298	ythdf3	99	80.756	Paramormyrops_kingsleyae
ENSHBUG00000018631	ythdf3	93	90.226	ENSPMGG00000023791	ythdf3	96	95.413	Periophthalmus_magnuspinnatus
ENSHBUG00000018631	ythdf3	99	92.270	ENSPFOG00000006082	ythdf3	51	94.822	Poecilia_formosa
ENSHBUG00000018631	ythdf3	99	92.434	ENSPLAG00000006902	ythdf3	51	94.822	Poecilia_latipinna
ENSHBUG00000018631	ythdf3	99	92.270	ENSPMEG00000012922	ythdf3	99	84.854	Poecilia_mexicana
ENSHBUG00000018631	ythdf3	99	91.626	ENSPREG00000019781	ythdf3	99	82.444	Poecilia_reticulata
ENSHBUG00000018631	ythdf3	97	55.034	ENSPPYG00000018626	YTHDF3	65	92.553	Pongo_abelii
ENSHBUG00000018631	ythdf3	88	93.085	ENSPVAG00000002740	YTHDF3	85	93.085	Pteropus_vampyrus
ENSHBUG00000018631	ythdf3	100	99.672	ENSPNYG00000002949	ythdf3	100	99.672	Pundamilia_nyererei
ENSHBUG00000018631	ythdf3	92	79.962	ENSSFOG00015015445	ythdf3	97	89.862	Scleropages_formosus
ENSHBUG00000018631	ythdf3	96	94.567	ENSSMAG00000014999	ythdf3	53	95.833	Scophthalmus_maximus
ENSHBUG00000018631	ythdf3	99	94.572	ENSSDUG00000014403	ythdf3	98	96.833	Seriola_dumerili
ENSHBUG00000018631	ythdf3	99	94.572	ENSSLDG00000005029	ythdf3	98	89.005	Seriola_lalandi_dorsalis
ENSHBUG00000018631	ythdf3	99	67.302	ENSSPUG00000009390	YTHDF3	99	71.358	Sphenodon_punctatus
ENSHBUG00000018631	ythdf3	99	96.026	ENSSPAG00000001269	ythdf3	99	96.026	Stegastes_partitus
ENSHBUG00000018631	ythdf3	98	67.472	ENSTGUG00000011243	YTHDF3	100	72.148	Taeniopygia_guttata
ENSHBUG00000018631	ythdf3	99	91.584	ENSTRUG00000007870	ythdf3	51	93.204	Takifugu_rubripes
ENSHBUG00000018631	ythdf3	85	86.463	ENSVPAG00000008104	YTHDF3	71	89.617	Vicugna_pacos
ENSHBUG00000018631	ythdf3	97	74.570	ENSXETG00000021659	ythdf3	99	74.582	Xenopus_tropicalis
ENSHBUG00000018631	ythdf3	99	87.171	ENSXCOG00000009687	ythdf3	53	90.820	Xiphophorus_couchianus
ENSHBUG00000018631	ythdf3	99	91.612	ENSXMAG00000009698	ythdf3	51	94.156	Xiphophorus_maculatus