EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000018916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3574 bases
Position: chrAFNZ01064514.1:878-4451
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	1	6
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	2	6
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	3	6
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	4	6
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	5	6
ENSHBUP00000016937	zf-C2H2	PF00096.26	2.2e-32	6	6
ENSHBUP00000032557	zf-C2H2	PF00096.26	7.4e-21	1	4
ENSHBUP00000032557	zf-C2H2	PF00096.26	7.4e-21	2	4
ENSHBUP00000032557	zf-C2H2	PF00096.26	7.4e-21	3	4
ENSHBUP00000032557	zf-C2H2	PF00096.26	7.4e-21	4	4
ENSHBUP00000016937	zf-met	PF12874.7	4.9e-12	1	2
ENSHBUP00000016937	zf-met	PF12874.7	4.9e-12	2	2
ENSHBUP00000032557	zf-met	PF12874.7	9.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025600	-	2041	-	ENSHBUP00000016937	374 (aa)	-	-
ENSHBUT00000025586	-	1065	-	ENSHBUP00000032557	354 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000018916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000018916	-	61	33.735	ENSHBUG00000014494	-	63	33.333
ENSHBUG00000018916	-	66	62.555	ENSHBUG00000006984	-	98	62.555
ENSHBUG00000018916	-	59	38.356	ENSHBUG00000005726	-	69	35.088
ENSHBUG00000018916	-	73	39.910	ENSHBUG00000005848	-	93	41.284
ENSHBUG00000018916	-	91	48.718	ENSHBUG00000016619	zbtb47b	52	37.805
ENSHBUG00000018916	-	60	45.045	ENSHBUG00000014725	-	85	45.045
ENSHBUG00000018916	-	91	43.675	ENSHBUG00000009941	-	99	43.675
ENSHBUG00000018916	-	93	51.899	ENSHBUG00000009837	znf236	69	51.899
ENSHBUG00000018916	-	61	42.857	ENSHBUG00000013264	-	87	42.857
ENSHBUG00000018916	-	93	44.444	ENSHBUG00000013292	-	99	48.235
ENSHBUG00000018916	-	61	55.978	ENSHBUG00000015942	-	95	53.659
ENSHBUG00000018916	-	59	56.614	ENSHBUG00000013194	-	79	54.286
ENSHBUG00000018916	-	61	42.793	ENSHBUG00000006250	-	85	42.793
ENSHBUG00000018916	-	99	58.011	ENSHBUG00000012230	-	99	58.011
ENSHBUG00000018916	-	99	39.568	ENSHBUG00000002533	-	87	52.941
ENSHBUG00000018916	-	78	44.286	ENSHBUG00000005809	-	97	44.286
ENSHBUG00000018916	-	61	43.750	ENSHBUG00000002878	-	57	43.750
ENSHBUG00000018916	-	59	39.744	ENSHBUG00000001692	si:ch211-236k19.4	67	39.744
ENSHBUG00000018916	-	93	43.750	ENSHBUG00000003165	-	99	47.904
ENSHBUG00000018916	-	63	50.467	ENSHBUG00000019800	-	90	50.467
ENSHBUG00000018916	-	92	51.111	ENSHBUG00000000636	-	78	51.111
ENSHBUG00000018916	-	65	57.426	ENSHBUG00000002541	-	76	57.426
ENSHBUG00000018916	-	61	41.111	ENSHBUG00000016334	-	50	41.111
ENSHBUG00000018916	-	61	45.122	ENSHBUG00000006656	-	59	45.882
ENSHBUG00000018916	-	77	55.615	ENSHBUG00000017372	-	94	56.354
ENSHBUG00000018916	-	65	43.636	ENSHBUG00000002320	-	58	44.595
ENSHBUG00000018916	-	88	54.985	ENSHBUG00000012984	-	99	54.985
ENSHBUG00000018916	-	91	46.763	ENSHBUG00000013065	-	82	46.763
ENSHBUG00000018916	-	89	44.348	ENSHBUG00000013467	-	75	44.348
ENSHBUG00000018916	-	79	60.106	ENSHBUG00000021906	-	99	60.106
ENSHBUG00000018916	-	62	37.838	ENSHBUG00000017445	zbtb41	53	37.838
ENSHBUG00000018916	-	90	46.154	ENSHBUG00000011944	-	81	48.503
ENSHBUG00000018916	-	61	36.170	ENSHBUG00000009815	znf319b	85	38.953
ENSHBUG00000018916	-	93	46.439	ENSHBUG00000007188	-	87	47.143
ENSHBUG00000018916	-	86	46.749	ENSHBUG00000015803	-	94	52.137
ENSHBUG00000018916	-	64	34.307	ENSHBUG00000016621	scrt1b	75	34.307
ENSHBUG00000018916	-	96	48.760	ENSHBUG00000002889	-	93	50.000
ENSHBUG00000018916	-	64	58.537	ENSHBUG00000021003	-	97	53.535
ENSHBUG00000018916	-	68	46.018	ENSHBUG00000002961	-	95	46.018
ENSHBUG00000018916	-	64	41.176	ENSHBUG00000006238	-	94	42.623
ENSHBUG00000018916	-	61	49.383	ENSHBUG00000008502	-	82	49.383
ENSHBUG00000018916	-	61	46.939	ENSHBUG00000022063	-	58	46.939
ENSHBUG00000018916	-	63	39.823	ENSHBUG00000023375	prdm5	88	39.823
ENSHBUG00000018916	-	64	41.827	ENSHBUG00000002307	-	74	41.827
ENSHBUG00000018916	-	100	43.176	ENSHBUG00000015226	-	80	45.977
ENSHBUG00000018916	-	99	57.025	ENSHBUG00000006977	-	85	62.975
ENSHBUG00000018916	-	93	50.000	ENSHBUG00000002526	-	94	50.000
ENSHBUG00000018916	-	95	42.857	ENSHBUG00000002527	wt1a	58	42.857
ENSHBUG00000018916	-	89	53.744	ENSHBUG00000004718	-	98	53.744
ENSHBUG00000018916	-	79	57.239	ENSHBUG00000017869	-	99	60.669
ENSHBUG00000018916	-	67	59.740	ENSHBUG00000017864	-	93	59.740
ENSHBUG00000018916	-	61	47.449	ENSHBUG00000000820	-	94	47.826
ENSHBUG00000018916	-	82	53.431	ENSHBUG00000015166	-	96	53.431
ENSHBUG00000018916	-	59	34.715	ENSHBUG00000005895	-	74	34.118
ENSHBUG00000018916	-	73	58.537	ENSHBUG00000012007	-	88	58.537
ENSHBUG00000018916	-	64	42.211	ENSHBUG00000009319	znf384l	54	41.395
ENSHBUG00000018916	-	62	46.250	ENSHBUG00000005451	gfi1b	50	46.250
ENSHBUG00000018916	-	61	54.000	ENSHBUG00000003529	-	88	54.000
ENSHBUG00000018916	-	91	55.228	ENSHBUG00000011725	-	95	58.140
ENSHBUG00000018916	-	58	40.000	ENSHBUG00000013491	snai1a	73	41.667
ENSHBUG00000018916	-	60	44.030	ENSHBUG00000020544	-	84	44.030
ENSHBUG00000018916	-	76	51.773	ENSHBUG00000011194	-	93	51.773
ENSHBUG00000018916	-	59	45.763	ENSHBUG00000017251	-	98	45.763
ENSHBUG00000018916	-	92	42.373	ENSHBUG00000021970	-	90	53.409
ENSHBUG00000018916	-	85	52.222	ENSHBUG00000021028	-	98	48.315
ENSHBUG00000018916	-	71	44.037	ENSHBUG00000003057	-	92	45.562
ENSHBUG00000018916	-	59	39.048	ENSHBUG00000007764	snai2	64	39.048
ENSHBUG00000018916	-	59	38.636	ENSHBUG00000019101	-	56	41.667
ENSHBUG00000018916	-	88	55.779	ENSHBUG00000000099	-	93	55.779
ENSHBUG00000018916	-	63	41.139	ENSHBUG00000013296	-	98	41.139
ENSHBUG00000018916	-	63	38.095	ENSHBUG00000019090	ZNF319	88	39.130
ENSHBUG00000018916	-	89	43.814	ENSHBUG00000012432	-	88	43.814
ENSHBUG00000018916	-	65	46.457	ENSHBUG00000002841	-	79	46.988
ENSHBUG00000018916	-	53	55.405	ENSHBUG00000017924	-	51	49.412
ENSHBUG00000018916	-	60	42.938	ENSHBUG00000009274	-	87	42.938
ENSHBUG00000018916	-	61	48.165	ENSHBUG00000016546	-	64	48.165
ENSHBUG00000018916	-	100	38.621	ENSHBUG00000004077	-	94	55.738
ENSHBUG00000018916	-	61	34.568	ENSHBUG00000017542	znf526	54	43.636
ENSHBUG00000018916	-	63	47.598	ENSHBUG00000013518	-	88	48.352
ENSHBUG00000018916	-	61	40.541	ENSHBUG00000003449	-	91	40.541
ENSHBUG00000018916	-	62	43.636	ENSHBUG00000004217	-	74	45.968
ENSHBUG00000018916	-	84	61.728	ENSHBUG00000017843	-	70	66.154
ENSHBUG00000018916	-	90	58.382	ENSHBUG00000020071	-	85	58.671
ENSHBUG00000018916	-	79	49.662	ENSHBUG00000000146	-	99	49.662
ENSHBUG00000018916	-	89	46.512	ENSHBUG00000009953	-	90	46.512
ENSHBUG00000018916	-	93	48.214	ENSHBUG00000019377	-	80	48.214
ENSHBUG00000018916	-	61	45.185	ENSHBUG00000018885	-	83	42.353
ENSHBUG00000018916	-	63	43.860	ENSHBUG00000015719	-	98	43.860
ENSHBUG00000018916	-	59	37.255	ENSHBUG00000012492	scrt2	53	37.255
ENSHBUG00000018916	-	96	59.452	ENSHBUG00000007068	-	90	59.248
ENSHBUG00000018916	-	56	43.558	ENSHBUG00000015404	-	83	44.898
ENSHBUG00000018916	-	74	44.388	ENSHBUG00000006863	-	90	44.388
ENSHBUG00000018916	-	61	44.444	ENSHBUG00000023209	-	88	46.939
ENSHBUG00000018916	-	96	47.414	ENSHBUG00000002393	-	91	47.414
ENSHBUG00000018916	-	98	51.304	ENSHBUG00000002530	-	93	51.786
ENSHBUG00000018916	-	62	43.111	ENSHBUG00000016927	-	62	43.111
ENSHBUG00000018916	-	89	47.783	ENSHBUG00000013542	-	89	47.783
ENSHBUG00000018916	-	60	42.308	ENSHBUG00000020527	-	86	42.727
ENSHBUG00000018916	-	98	33.824	ENSHBUG00000002881	-	88	49.123
ENSHBUG00000018916	-	96	51.485	ENSHBUG00000022021	-	69	51.485
ENSHBUG00000018916	-	67	45.673	ENSHBUG00000007316	-	71	50.000
ENSHBUG00000018916	-	72	45.701	ENSHBUG00000015393	-	75	45.701
ENSHBUG00000018916	-	62	44.206	ENSHBUG00000016384	-	81	47.429
ENSHBUG00000018916	-	79	54.000	ENSHBUG00000022073	-	91	47.647
ENSHBUG00000018916	-	92	51.948	ENSHBUG00000013490	-	89	50.311
ENSHBUG00000018916	-	62	39.535	ENSHBUG00000000731	-	59	45.349
ENSHBUG00000018916	-	62	47.794	ENSHBUG00000006662	-	66	52.778
ENSHBUG00000018916	-	70	56.710	ENSHBUG00000012565	-	98	55.294
ENSHBUG00000018916	-	83	51.852	ENSHBUG00000012758	-	100	55.022
ENSHBUG00000018916	-	69	44.231	ENSHBUG00000004840	znf646	76	40.449
ENSHBUG00000018916	-	86	48.921	ENSHBUG00000001075	-	97	53.333
ENSHBUG00000018916	-	63	31.757	ENSHBUG00000009720	-	61	34.400
ENSHBUG00000018916	-	94	56.667	ENSHBUG00000012215	-	97	61.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018916	-	90	61.250	ENSACIG00000000360	si:ch211-241b2.1	99	61.250	Amphilophus_citrinellus
ENSHBUG00000018916	-	61	40.667	ENSACIG00000008886	znf1164	87	40.667	Amphilophus_citrinellus
ENSHBUG00000018916	-	71	46.341	ENSACIG00000007882	-	81	46.341	Amphilophus_citrinellus
ENSHBUG00000018916	-	55	39.394	ENSAOCG00000021565	-	85	41.667	Amphiprion_ocellaris
ENSHBUG00000018916	-	98	44.275	ENSATEG00000008667	-	93	44.275	Anabas_testudineus
ENSHBUG00000018916	-	90	47.716	ENSATEG00000008683	si:ch211-241b2.1	91	56.098	Anabas_testudineus
ENSHBUG00000018916	-	91	58.286	ENSACLG00000024670	-	98	55.455	Astatotilapia_calliptera
ENSHBUG00000018916	-	61	39.053	ENSACLG00000017449	-	57	39.394	Astatotilapia_calliptera
ENSHBUG00000018916	-	59	47.126	ENSACLG00000000521	-	93	47.126	Astatotilapia_calliptera
ENSHBUG00000018916	-	62	56.886	ENSAMXG00000041650	-	85	56.886	Astyanax_mexicanus
ENSHBUG00000018916	-	62	53.953	ENSAMXG00000043291	-	85	53.953	Astyanax_mexicanus
ENSHBUG00000018916	-	64	50.000	ENSAMXG00000029660	-	51	50.000	Astyanax_mexicanus
ENSHBUG00000018916	-	85	36.111	ENSCSEG00000015585	-	91	38.889	Cynoglossus_semilaevis
ENSHBUG00000018916	-	66	51.965	ENSDARG00000105056	znf45l	93	51.965	Danio_rerio
ENSHBUG00000018916	-	63	49.367	ENSDARG00000100361	znf1174	97	49.367	Danio_rerio
ENSHBUG00000018916	-	62	55.172	ENSDARG00000099890	CU207221.2	99	55.172	Danio_rerio
ENSHBUG00000018916	-	87	52.535	ENSDARG00000078814	si:dkey-34m19.3	76	52.535	Danio_rerio
ENSHBUG00000018916	-	64	53.368	ENSDARG00000105074	BX000701.2	98	53.368	Danio_rerio
ENSHBUG00000018916	-	66	53.017	ENSDARG00000097521	si:dkey-111k8.5	89	53.017	Danio_rerio
ENSHBUG00000018916	-	61	49.545	ENSDARG00000115857	znf1001	93	52.174	Danio_rerio
ENSHBUG00000018916	-	61	48.246	ENSDARG00000116765	zgc:162962	99	45.402	Danio_rerio
ENSHBUG00000018916	-	61	47.807	ENSDARG00000102401	znf1001	93	49.133	Danio_rerio
ENSHBUG00000018916	-	61	54.872	ENSDARG00000103777	znf1001	98	54.872	Danio_rerio
ENSHBUG00000018916	-	64	54.902	ENSDARG00000098248	CABZ01081730.1	90	54.902	Danio_rerio
ENSHBUG00000018916	-	64	54.902	ENSDARG00000100803	zgc:173517	90	54.902	Danio_rerio
ENSHBUG00000018916	-	64	54.128	ENSDARG00000113011	zgc:113102	94	54.128	Danio_rerio
ENSHBUG00000018916	-	61	49.145	ENSDARG00000078159	zgc:175284	86	50.909	Danio_rerio
ENSHBUG00000018916	-	61	54.404	ENSDARG00000109703	FO834825.1	81	54.404	Danio_rerio
ENSHBUG00000018916	-	88	52.381	ENSDARG00000053165	zgc:113377	99	52.381	Danio_rerio
ENSHBUG00000018916	-	94	51.111	ENSDARG00000111614	znf1183	97	51.111	Danio_rerio
ENSHBUG00000018916	-	66	54.274	ENSDARG00000099731	CABZ01066719.1	99	54.274	Danio_rerio
ENSHBUG00000018916	-	61	44.554	ENSEBUG00000015073	-	83	45.946	Eptatretus_burgeri
ENSHBUG00000018916	-	81	47.794	ENSELUG00000017412	-	64	47.794	Esox_lucius
ENSHBUG00000018916	-	100	50.000	ENSELUG00000008131	-	89	50.000	Esox_lucius
ENSHBUG00000018916	-	90	37.647	ENSFHEG00000018209	-	98	42.188	Fundulus_heteroclitus
ENSHBUG00000018916	-	93	48.619	ENSFHEG00000013152	-	97	47.020	Fundulus_heteroclitus
ENSHBUG00000018916	-	89	38.246	ENSFHEG00000014023	-	95	45.536	Fundulus_heteroclitus
ENSHBUG00000018916	-	69	50.877	ENSFHEG00000018009	-	56	50.877	Fundulus_heteroclitus
ENSHBUG00000018916	-	63	49.123	ENSKMAG00000009563	-	73	49.123	Kryptolebias_marmoratus
ENSHBUG00000018916	-	93	44.000	ENSKMAG00000014629	-	97	44.000	Kryptolebias_marmoratus
ENSHBUG00000018916	-	59	46.753	ENSLBEG00000022939	-	64	45.000	Labrus_bergylta
ENSHBUG00000018916	-	94	44.068	ENSLBEG00000028628	znf1174	75	46.111	Labrus_bergylta
ENSHBUG00000018916	-	88	49.367	ENSLBEG00000020461	-	92	49.231	Labrus_bergylta
ENSHBUG00000018916	-	99	46.154	ENSMAMG00000014743	-	79	46.154	Mastacembelus_armatus
ENSHBUG00000018916	-	61	37.186	ENSMZEG00005022161	-	94	40.000	Maylandia_zebra
ENSHBUG00000018916	-	89	73.054	ENSMZEG00005026470	-	95	70.807	Maylandia_zebra
ENSHBUG00000018916	-	86	71.914	ENSMZEG00005027793	-	97	71.914	Maylandia_zebra
ENSHBUG00000018916	-	87	94.769	ENSMZEG00005007426	-	91	94.769	Maylandia_zebra
ENSHBUG00000018916	-	59	44.304	ENSMZEG00005005162	-	67	45.000	Maylandia_zebra
ENSHBUG00000018916	-	61	48.603	ENSMZEG00005021426	-	79	48.603	Maylandia_zebra
ENSHBUG00000018916	-	82	65.306	ENSMZEG00005027943	-	92	65.306	Maylandia_zebra
ENSHBUG00000018916	-	86	56.579	ENSMZEG00005025729	-	95	56.579	Maylandia_zebra
ENSHBUG00000018916	-	61	38.767	ENSMZEG00005025568	-	80	39.130	Maylandia_zebra
ENSHBUG00000018916	-	78	45.783	ENSMALG00000008638	-	67	45.783	Monopterus_albus
ENSHBUG00000018916	-	97	48.325	ENSMALG00000018074	-	94	48.325	Monopterus_albus
ENSHBUG00000018916	-	92	50.820	ENSNBRG00000000577	-	98	58.081	Neolamprologus_brichardi
ENSHBUG00000018916	-	67	37.500	ENSONIG00000006585	-	93	39.623	Oreochromis_niloticus
ENSHBUG00000018916	-	74	41.860	ENSONIG00000013908	-	100	50.000	Oreochromis_niloticus
ENSHBUG00000018916	-	61	42.000	ENSONIG00000003363	-	94	47.297	Oreochromis_niloticus
ENSHBUG00000018916	-	60	49.091	ENSORLG00020019341	-	84	62.500	Oryzias_latipes_hni
ENSHBUG00000018916	-	86	42.857	ENSPKIG00000018633	-	73	45.238	Paramormyrops_kingsleyae
ENSHBUG00000018916	-	67	39.175	ENSPKIG00000020324	-	62	39.175	Paramormyrops_kingsleyae
ENSHBUG00000018916	-	84	39.394	ENSPMGG00000001558	znf1174	90	39.394	Periophthalmus_magnuspinnatus
ENSHBUG00000018916	-	61	49.074	ENSPFOG00000001144	-	100	48.649	Poecilia_formosa
ENSHBUG00000018916	-	61	42.788	ENSPFOG00000011766	-	98	42.788	Poecilia_formosa
ENSHBUG00000018916	-	93	44.086	ENSPLAG00000016561	zgc:113348	98	44.086	Poecilia_latipinna
ENSHBUG00000018916	-	62	46.067	ENSPMEG00000007573	zgc:113343	64	46.067	Poecilia_mexicana
ENSHBUG00000018916	-	64	43.713	ENSPREG00000005538	-	74	43.713	Poecilia_reticulata
ENSHBUG00000018916	-	62	45.876	ENSPREG00000001514	zgc:113343	95	44.944	Poecilia_reticulata
ENSHBUG00000018916	-	60	47.015	ENSPREG00000014105	-	80	47.015	Poecilia_reticulata
ENSHBUG00000018916	-	61	40.588	ENSPNYG00000024183	zgc:173577	98	40.588	Pundamilia_nyererei
ENSHBUG00000018916	-	88	60.000	ENSSDUG00000008682	-	98	60.000	Seriola_dumerili
ENSHBUG00000018916	-	69	39.855	ENSSPAG00000006539	-	93	42.857	Stegastes_partitus
ENSHBUG00000018916	-	58	48.148	ENSSPAG00000009426	-	84	32.919	Stegastes_partitus
ENSHBUG00000018916	-	79	43.333	ENSSPAG00000013109	si:ch211-241b2.1	91	53.571	Stegastes_partitus
ENSHBUG00000018916	-	62	48.352	ENSTNIG00000000277	-	93	48.352	Tetraodon_nigroviridis
ENSHBUG00000018916	-	63	44.944	ENSXCOG00000017871	zgc:113343	72	44.944	Xiphophorus_couchianus
ENSHBUG00000018916	-	76	44.944	ENSXMAG00000019923	zgc:113343	80	44.944	Xiphophorus_maculatus