EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000018937 (Gene tree)
Gene ID
102301109
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
13066 bases
Position
chrJH425768.1:37618-50683
Accession
102301109
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000016834RNA_pol_Rpb1_5PF04998.172.3e-10111
ENSHBUP00000016823RNA_pol_Rpb1_5PF04998.172.3e-10111
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22130
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22230
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22330
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22430
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22530
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22630
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22730
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22830
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-22930
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221030
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221130
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221230
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221330
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221430
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221530
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221630
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221730
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221830
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-221930
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222030
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222130
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222230
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222330
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222430
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222530
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222630
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222730
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222830
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-222930
ENSHBUP00000016823RNA_pol_Rpb1_RPF05001.133.7e-223030
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20138
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20238
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20338
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20438
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20538
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20638
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20738
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20838
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-20938
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201038
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201138
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201238
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201338
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201438
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201538
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201638
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201738
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201838
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-201938
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202038
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202138
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202238
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202338
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202438
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202538
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202638
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202738
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202838
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-202938
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203038
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203138
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203238
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203338
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203438
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203538
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203638
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203738
ENSHBUP00000016834RNA_pol_Rpb1_RPF05001.132.1e-203838
ENSHBUP00000016823RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSHBUP00000016834RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSHBUP00000016823RNA_pol_Rpb1_2PF00623.206.1e-7511
ENSHBUP00000016834RNA_pol_Rpb1_2PF00623.206.2e-7511
ENSHBUP00000016823RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSHBUP00000016834RNA_pol_Rpb1_3PF04983.183e-5011
ENSHBUP00000016823RNA_pol_Rpb1_1PF04997.121e-10811
ENSHBUP00000016834RNA_pol_Rpb1_1PF04997.121e-10811
ENSHBUP00000016823RNA_pol_Rpb1_7PF04990.121.9e-5511
ENSHBUP00000016834RNA_pol_Rpb1_7PF04990.121.9e-5511
ENSHBUP00000016823RNA_pol_Rpb1_6PF04992.145.5e-6711
ENSHBUP00000016834RNA_pol_Rpb1_6PF04992.145.5e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000034383-5712-ENSHBUP000000168231903 (aa)--
ENSHBUT00000025456-5718XM_005945284ENSHBUP000000168341906 (aa)XP_005945346UPI0003BCF0ED
Gene Model
Click here to download ENSHBUG00000018937's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018937's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000018937polr2a6838.403ENSHBUG00000018098polr3a9137.927
ENSHBUG00000018937polr2a5935.238ENSHBUG00000020021polr1a8235.238
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000018937polr2a9198.511ENSAPOG00000006552polr2a8698.511Acanthochromis_polyacanthus
ENSHBUG00000018937polr2a9893.866ENSAMEG00000016265-8593.874Ailuropoda_melanoleuca
ENSHBUG00000018937polr2a9898.981ENSACIG00000015982polr2a9998.981Amphilophus_citrinellus
ENSHBUG00000018937polr2a9896.554ENSAOCG00000004255polr2a9098.539Amphiprion_ocellaris
ENSHBUG00000018937polr2a10098.793ENSAPEG00000012623polr2a9998.793Amphiprion_percula
ENSHBUG00000018937polr2a10098.688ENSATEG00000019644polr2a9998.688Anabas_testudineus
ENSHBUG00000018937polr2a9894.472ENSACAG00000014561POLR2A8594.479Anolis_carolinensis
ENSHBUG00000018937polr2a9994.227ENSANAG00000020093-9192.126Aotus_nancymaae
ENSHBUG00000018937polr2a100100.000ENSACLG00000006735polr2a99100.000Astatotilapia_calliptera
ENSHBUG00000018937polr2a10097.482ENSAMXG00000020046polr2a9997.534Astyanax_mexicanus
ENSHBUG00000018937polr2a9994.227ENSBTAG00000046765POLR2A8594.234Bos_taurus
ENSHBUG00000018937polr2a9969.693WBGene00000123ama-19381.132Caenorhabditis_elegans
ENSHBUG00000018937polr2a9694.165ENSCAFG00000016532POLR2A9794.172Canis_familiaris
ENSHBUG00000018937polr2a9993.300ENSCAFG00020007929-9191.383Canis_lupus_dingo
ENSHBUG00000018937polr2a9994.227ENSCHIG00000027173-8594.234Capra_hircus
ENSHBUG00000018937polr2a9894.406ENSTSYG00000012803-9192.126Carlito_syrichta
ENSHBUG00000018937polr2a9890.773ENSCAPG00000001882-9793.300Cavia_aperea
ENSHBUG00000018937polr2a9990.710ENSCPOG00000014812-9793.056Cavia_porcellus
ENSHBUG00000018937polr2a9994.227ENSCCAG00000020938-9192.126Cebus_capucinus
ENSHBUG00000018937polr2a9994.165ENSCATG00000013680-9191.383Cercocebus_atys
ENSHBUG00000018937polr2a9994.103ENSCLAG00000012196-9591.894Chinchilla_lanigera
ENSHBUG00000018937polr2a9985.441ENSCSAG00000011644-8586.207Chlorocebus_sabaeus
ENSHBUG00000018937polr2a9590.807ENSCPBG00000012697POLR2A9985.853Chrysemys_picta_bellii
ENSHBUG00000018937polr2a9976.610ENSCING00000007884-9977.166Ciona_intestinalis
ENSHBUG00000018937polr2a9079.630ENSCSAVG00000008334-9981.726Ciona_savignyi
ENSHBUG00000018937polr2a9993.482ENSCANG00000010622-9190.546Colobus_angolensis_palliatus
ENSHBUG00000018937polr2a9788.826ENSCGRG00001003538Polr2a9589.213Cricetulus_griseus_chok1gshd
ENSHBUG00000018937polr2a10097.377ENSCSEG00000002635polr2a9997.377Cynoglossus_semilaevis
ENSHBUG00000018937polr2a10098.216ENSCVAG00000005156polr2a9998.216Cyprinodon_variegatus
ENSHBUG00000018937polr2a10097.063ENSDARG00000099966polr2a9997.063Danio_rerio
ENSHBUG00000018937polr2a9990.797ENSDNOG00000016482-8590.808Dasypus_novemcinctus
ENSHBUG00000018937polr2a9994.227ENSDORG00000008667Polr2a9192.126Dipodomys_ordii
ENSHBUG00000018937polr2a9970.734FBgn0003277RpII2159175.280Drosophila_melanogaster
ENSHBUG00000018937polr2a9490.000ENSETEG00000002540-8891.096Echinops_telfairi
ENSHBUG00000018937polr2a8487.149ENSEBUG00000013967polr2a9086.748Eptatretus_burgeri
ENSHBUG00000018937polr2a9892.308ENSEASG00005019114-9592.317Equus_asinus_asinus
ENSHBUG00000018937polr2a9994.227ENSECAG00000018485POLR2A8594.234Equus_caballus
ENSHBUG00000018937polr2a8694.192ENSEEUG00000001154-9594.192Erinaceus_europaeus
ENSHBUG00000018937polr2a9491.862ENSELUG00000014284polr2a9092.540Esox_lucius
ENSHBUG00000018937polr2a9994.289ENSFDAG00000008287-8594.296Fukomys_damarensis
ENSHBUG00000018937polr2a10097.744ENSFHEG00000001768polr2a9997.744Fundulus_heteroclitus
ENSHBUG00000018937polr2a9792.410ENSGMOG00000007725polr2a10092.433Gadus_morhua
ENSHBUG00000018937polr2a9992.770ENSGAFG00000005389polr2a9994.851Gambusia_affinis
ENSHBUG00000018937polr2a9994.135ENSGACG00000019366polr2a10093.914Gasterosteus_aculeatus
ENSHBUG00000018937polr2a9891.550ENSGGOG00000014800-9692.690Gorilla_gorilla
ENSHBUG00000018937polr2a9994.289ENSHGLG00000012381POLR2A9192.188Heterocephalus_glaber_female
ENSHBUG00000018937polr2a9994.289ENSHGLG00100014843POLR2A9192.188Heterocephalus_glaber_male
ENSHBUG00000018937polr2a10097.744ENSHCOG00000011874polr2a9997.744Hippocampus_comes
ENSHBUG00000018937polr2a10097.219ENSIPUG00000002613Polr2a9997.265Ictalurus_punctatus
ENSHBUG00000018937polr2a9994.227ENSSTOG00000001304-9192.126Ictidomys_tridecemlineatus
ENSHBUG00000018937polr2a9994.227ENSJJAG00000013049Polr2a9192.126Jaculus_jaculus
ENSHBUG00000018937polr2a8377.037ENSKMAG00000016343polr2a8586.200Kryptolebias_marmoratus
ENSHBUG00000018937polr2a10098.164ENSLBEG00000027652polr2a9998.164Labrus_bergylta
ENSHBUG00000018937polr2a9783.112ENSLACG00000012071POLR2A8885.209Latimeria_chalumnae
ENSHBUG00000018937polr2a9896.408ENSLOCG00000013863polr2a9395.965Lepisosteus_oculatus
ENSHBUG00000018937polr2a9994.227ENSLAFG00000008626-9591.569Loxodonta_africana
ENSHBUG00000018937polr2a5192.850ENSMFAG00000007042-9992.850Macaca_fascicularis
ENSHBUG00000018937polr2a9994.165ENSMMUG00000023620-9192.064Macaca_mulatta
ENSHBUG00000018937polr2a9993.731ENSMNEG00000040407-9191.631Macaca_nemestrina
ENSHBUG00000018937polr2a9789.747ENSMLEG00000030263-9992.850Mandrillus_leucophaeus
ENSHBUG00000018937polr2a10098.426ENSMAMG00000003351polr2a9998.426Mastacembelus_armatus
ENSHBUG00000018937polr2a100100.000ENSMZEG00005021429polr2a99100.000Maylandia_zebra
ENSHBUG00000018937polr2a5294.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSHBUG00000018937polr2a9994.165ENSMICG00000013372-9893.347Microcebus_murinus
ENSHBUG00000018937polr2a9791.942ENSMOCG00000018279Polr2a9889.926Microtus_ochrogaster
ENSHBUG00000018937polr2a9998.038ENSMMOG00000012515polr2a9698.038Mola_mola
ENSHBUG00000018937polr2a9993.917ENSMODG00000007009-8593.924Monodelphis_domestica
ENSHBUG00000018937polr2a9997.953ENSMALG00000008716polr2a9797.953Monopterus_albus
ENSHBUG00000018937polr2a9994.227MGP_CAROLIEiJ_G0016587Polr2a9192.126Mus_caroli
ENSHBUG00000018937polr2a9994.227ENSMUSG00000005198Polr2a9192.126Mus_musculus
ENSHBUG00000018937polr2a9992.151MGP_PahariEiJ_G0017718Polr2a8592.160Mus_pahari
ENSHBUG00000018937polr2a9994.227MGP_SPRETEiJ_G0017423Polr2a9192.126Mus_spretus
ENSHBUG00000018937polr2a9994.227ENSMPUG00000009648-8594.234Mustela_putorius_furo
ENSHBUG00000018937polr2a9993.738ENSMLUG00000009088-8593.746Myotis_lucifugus
ENSHBUG00000018937polr2a9994.227ENSNGAG00000002543Polr2a9192.126Nannospalax_galili
ENSHBUG00000018937polr2a9899.732ENSNBRG00000002005polr2a9999.732Neolamprologus_brichardi
ENSHBUG00000018937polr2a9894.406ENSNLEG00000009460-9192.126Nomascus_leucogenys
ENSHBUG00000018937polr2a9394.989ENSMEUG00000008611-9586.515Notamacropus_eugenii
ENSHBUG00000018937polr2a8393.936ENSOPRG00000015116-9993.936Ochotona_princeps
ENSHBUG00000018937polr2a9790.909ENSODEG00000017674-9789.613Octodon_degus
ENSHBUG00000018937polr2a10099.633ENSONIG00000009231polr2a9999.633Oreochromis_niloticus
ENSHBUG00000018937polr2a9993.010ENSOCUG00000017929-9994.110Oryctolagus_cuniculus
ENSHBUG00000018937polr2a10098.216ENSORLG00000006431polr2a9998.231Oryzias_latipes
ENSHBUG00000018937polr2a10098.216ENSORLG00020010235polr2a9998.231Oryzias_latipes_hni
ENSHBUG00000018937polr2a10098.111ENSORLG00015007075polr2a9998.123Oryzias_latipes_hsok
ENSHBUG00000018937polr2a9797.822ENSOMEG00000010713polr2a10097.822Oryzias_melastigma
ENSHBUG00000018937polr2a9994.227ENSOGAG00000033608-8594.234Otolemur_garnettii
ENSHBUG00000018937polr2a9294.227ENSOARG00000013874-8594.234Ovis_aries
ENSHBUG00000018937polr2a9991.818ENSPPAG00000043734-9293.905Pan_paniscus
ENSHBUG00000018937polr2a9894.406ENSPTRG00000008691POLR2A9192.126Pan_troglodytes
ENSHBUG00000018937polr2a9993.482ENSPANG00000024099-9191.383Papio_anubis
ENSHBUG00000018937polr2a8095.287ENSPKIG00000005727polr2a8595.287Paramormyrops_kingsleyae
ENSHBUG00000018937polr2a9892.527ENSPSIG00000014006POLR2A10092.441Pelodiscus_sinensis
ENSHBUG00000018937polr2a9997.324ENSPMGG00000019734polr2a9997.324Periophthalmus_magnuspinnatus
ENSHBUG00000018937polr2a9994.227ENSPEMG00000012521Polr2a9192.126Peromyscus_maniculatus_bairdii
ENSHBUG00000018937polr2a8993.921ENSPCIG00000028851-8293.921Phascolarctos_cinereus
ENSHBUG00000018937polr2a9998.153ENSPFOG00000007890polr2a9998.153Poecilia_formosa
ENSHBUG00000018937polr2a9998.153ENSPLAG00000007399polr2a9998.153Poecilia_latipinna
ENSHBUG00000018937polr2a9998.153ENSPMEG00000002071polr2a9998.169Poecilia_mexicana
ENSHBUG00000018937polr2a10098.111ENSPREG00000013122polr2a9998.123Poecilia_reticulata
ENSHBUG00000018937polr2a9594.227ENSPPYG00000007924-8591.569Pongo_abelii
ENSHBUG00000018937polr2a9195.000ENSPCAG00000006951-8195.000Procavia_capensis
ENSHBUG00000018937polr2a9894.406ENSPCOG00000025260-9192.126Propithecus_coquereli
ENSHBUG00000018937polr2a9993.917ENSPVAG00000005069-8593.924Pteropus_vampyrus
ENSHBUG00000018937polr2a10099.948ENSPNYG00000022340polr2a9999.948Pundamilia_nyererei
ENSHBUG00000018937polr2a10097.534ENSPNAG00000011237polr2a9997.534Pygocentrus_nattereri
ENSHBUG00000018937polr2a9994.165ENSRNOG00000028834Polr2a8594.172Rattus_norvegicus
ENSHBUG00000018937polr2a9294.342ENSRBIG00000002471-9892.064Rhinopithecus_bieti
ENSHBUG00000018937polr2a9792.055ENSRROG00000029583-8594.172Rhinopithecus_roxellana
ENSHBUG00000018937polr2a8480.769YDL140CRPO219781.690Saccharomyces_cerevisiae
ENSHBUG00000018937polr2a9994.227ENSSBOG00000000808-9192.126Saimiri_boliviensis_boliviensis
ENSHBUG00000018937polr2a9993.917ENSSHAG00000002858-8493.924Sarcophilus_harrisii
ENSHBUG00000018937polr2a10097.429ENSSFOG00015023275polr2a9997.534Scleropages_formosus
ENSHBUG00000018937polr2a9895.533ENSSMAG00000009137polr2a8995.161Scophthalmus_maximus
ENSHBUG00000018937polr2a10098.741ENSSDUG00000020466polr2a9998.741Seriola_dumerili
ENSHBUG00000018937polr2a10098.688ENSSLDG00000020613polr2a9998.688Seriola_lalandi_dorsalis
ENSHBUG00000018937polr2a9989.892ENSSARG00000005875-9990.706Sorex_araneus
ENSHBUG00000018937polr2a10098.570ENSSPAG00000016741polr2a9498.570Stegastes_partitus
ENSHBUG00000018937polr2a9993.296ENSSSCG00000028278-8593.304Sus_scrofa
ENSHBUG00000018937polr2a9890.473ENSTRUG00000012320polr2a8192.436Takifugu_rubripes
ENSHBUG00000018937polr2a9696.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSHBUG00000018937polr2a7494.087ENSTBEG00000013294-5894.087Tupaia_belangeri
ENSHBUG00000018937polr2a9992.551ENSTTRG00000014273-8592.560Tursiops_truncatus
ENSHBUG00000018937polr2a9891.703ENSUAMG00000014866-9991.342Ursus_americanus
ENSHBUG00000018937polr2a9191.061ENSUMAG00000015732-9391.061Ursus_maritimus
ENSHBUG00000018937polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSHBUG00000018937polr2a9694.165ENSVVUG00000027878-9392.064Vulpes_vulpes
ENSHBUG00000018937polr2a9593.833ENSXETG00000012465polr2a8991.640Xenopus_tropicalis
ENSHBUG00000018937polr2a9697.297ENSXCOG00000001804polr2a9997.297Xiphophorus_couchianus
ENSHBUG00000018937polr2a10098.111ENSXMAG00000015687polr2a9998.123Xiphophorus_maculatus

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