EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000018999 (Gene tree)
Gene ID: 102297656
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 45199 bases
Position: chrJH425619.1:361044-406242
Accession: 102297656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017000	zf-met	PF12874.7	0.00012	1	1
ENSHBUP00000032606	zf-met	PF12874.7	0.00033	1	1
ENSHBUP00000032606	IPPT	PF01715.17	1.3e-64	1	1
ENSHBUP00000017000	IPPT	PF01715.17	7.2e-09	1	1
ENSHBUP00000017000	zf-C2H2_jaz	PF12171.8	1e-06	1	1
ENSHBUP00000032606	zf-C2H2_jaz	PF12171.8	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025682	-	4833	XM_005940873	ENSHBUP00000032606	478 (aa)	XP_005940935	UPI0003BCCA50
ENSHBUT00000034456	-	4022	-	ENSHBUP00000017000	237 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000018999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000018999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000018999	trit1	97	57.511	ENSG00000043514	TRIT1	99	62.791	Homo_sapiens
ENSHBUG00000018999	trit1	97	84.233	ENSAPOG00000020918	trit1	99	84.233	Acanthochromis_polyacanthus
ENSHBUG00000018999	trit1	86	62.683	ENSAMEG00000004342	TRIT1	91	61.253	Ailuropoda_melanoleuca
ENSHBUG00000018999	trit1	98	87.315	ENSACIG00000017409	trit1	99	87.315	Amphilophus_citrinellus
ENSHBUG00000018999	trit1	100	84.265	ENSAOCG00000009850	trit1	100	84.265	Amphiprion_ocellaris
ENSHBUG00000018999	trit1	100	84.058	ENSAPEG00000001481	trit1	100	84.058	Amphiprion_percula
ENSHBUG00000018999	trit1	100	81.420	ENSATEG00000005426	trit1	100	81.420	Anabas_testudineus
ENSHBUG00000018999	trit1	67	56.962	ENSAPLG00000011421	TRIT1	94	53.916	Anas_platyrhynchos
ENSHBUG00000018999	trit1	89	60.514	ENSACAG00000002280	TRIT1	84	60.514	Anolis_carolinensis
ENSHBUG00000018999	trit1	93	58.129	ENSANAG00000030732	TRIT1	99	55.867	Aotus_nancymaae
ENSHBUG00000018999	trit1	100	99.163	ENSACLG00000004920	trit1	100	99.163	Astatotilapia_calliptera
ENSHBUG00000018999	trit1	93	69.663	ENSAMXG00000010959	trit1	97	69.663	Astyanax_mexicanus
ENSHBUG00000018999	trit1	88	61.905	ENSBTAG00000013832	TRIT1	87	62.774	Bos_taurus
ENSHBUG00000018999	trit1	82	35.500	WBGene00001740	gro-1	94	35.422	Caenorhabditis_elegans
ENSHBUG00000018999	trit1	93	58.797	ENSCJAG00000002620	TRIT1	90	63.692	Callithrix_jacchus
ENSHBUG00000018999	trit1	89	61.358	ENSCAFG00000003048	TRIT1	94	60.045	Canis_familiaris
ENSHBUG00000018999	trit1	89	59.773	ENSCAFG00020003875	TRIT1	95	61.254	Canis_lupus_dingo
ENSHBUG00000018999	trit1	86	61.111	ENSCHIG00000013259	TRIT1	91	59.908	Capra_hircus
ENSHBUG00000018999	trit1	93	59.193	ENSTSYG00000004363	TRIT1	94	59.193	Carlito_syrichta
ENSHBUG00000018999	trit1	81	54.545	ENSCAPG00000017001	TRIT1	90	56.906	Cavia_aperea
ENSHBUG00000018999	trit1	95	59.259	ENSCPOG00000012820	TRIT1	95	59.259	Cavia_porcellus
ENSHBUG00000018999	trit1	93	58.705	ENSCCAG00000031271	TRIT1	93	61.798	Cebus_capucinus
ENSHBUG00000018999	trit1	86	58.838	ENSCATG00000034344	TRIT1	82	73.333	Cercocebus_atys
ENSHBUG00000018999	trit1	96	58.261	ENSCLAG00000009828	TRIT1	96	58.261	Chinchilla_lanigera
ENSHBUG00000018999	trit1	79	61.111	ENSCSAG00000001137	TRIT1	91	61.111	Chlorocebus_sabaeus
ENSHBUG00000018999	trit1	86	62.439	ENSCHOG00000000435	TRIT1	91	60.789	Choloepus_hoffmanni
ENSHBUG00000018999	trit1	69	59.036	ENSCPBG00000000908	-	85	59.341	Chrysemys_picta_bellii
ENSHBUG00000018999	trit1	85	44.762	ENSCSAVG00000002050	-	91	44.762	Ciona_savignyi
ENSHBUG00000018999	trit1	86	62.195	ENSCANG00000043008	TRIT1	90	64.062	Colobus_angolensis_palliatus
ENSHBUG00000018999	trit1	90	61.894	ENSCGRG00001001894	Trit1	94	61.036	Cricetulus_griseus_chok1gshd
ENSHBUG00000018999	trit1	85	58.924	ENSCGRG00000007059	Trit1	90	58.924	Cricetulus_griseus_crigri
ENSHBUG00000018999	trit1	87	81.490	ENSCSEG00000009574	trit1	94	79.688	Cynoglossus_semilaevis
ENSHBUG00000018999	trit1	72	81.871	ENSCVAG00000016675	trit1	75	84.756	Cyprinodon_variegatus
ENSHBUG00000018999	trit1	91	69.977	ENSDARG00000032876	trit1	99	70.659	Danio_rerio
ENSHBUG00000018999	trit1	93	51.859	ENSDNOG00000001994	TRIT1	98	50.940	Dasypus_novemcinctus
ENSHBUG00000018999	trit1	86	56.068	ENSDORG00000012449	Trit1	94	54.861	Dipodomys_ordii
ENSHBUG00000018999	trit1	86	38.952	FBgn0043799	CG31381	90	39.091	Drosophila_melanogaster
ENSHBUG00000018999	trit1	85	61.259	ENSETEG00000008733	TRIT1	99	60.377	Echinops_telfairi
ENSHBUG00000018999	trit1	85	55.746	ENSEBUG00000012845	trit1	91	55.746	Eptatretus_burgeri
ENSHBUG00000018999	trit1	82	53.030	ENSEASG00005000884	-	83	60.870	Equus_asinus_asinus
ENSHBUG00000018999	trit1	86	61.337	ENSECAG00000010597	TRIT1	84	59.817	Equus_caballus
ENSHBUG00000018999	trit1	71	55.814	ENSEEUG00000009269	TRIT1	75	54.545	Erinaceus_europaeus
ENSHBUG00000018999	trit1	96	65.584	ENSELUG00000017278	trit1	96	65.161	Esox_lucius
ENSHBUG00000018999	trit1	86	62.439	ENSFCAG00000006029	TRIT1	91	60.930	Felis_catus
ENSHBUG00000018999	trit1	79	60.686	ENSFALG00000000532	TRIT1	94	60.686	Ficedula_albicollis
ENSHBUG00000018999	trit1	87	59.112	ENSFDAG00000003098	TRIT1	93	59.112	Fukomys_damarensis
ENSHBUG00000018999	trit1	70	75.522	ENSFHEG00000022274	trit1	99	75.522	Fundulus_heteroclitus
ENSHBUG00000018999	trit1	89	77.262	ENSGMOG00000006522	trit1	100	77.262	Gadus_morhua
ENSHBUG00000018999	trit1	91	59.217	ENSGALG00000003851	TRIT1	94	59.217	Gallus_gallus
ENSHBUG00000018999	trit1	76	75.758	ENSGAFG00000018636	trit1	93	76.357	Gambusia_affinis
ENSHBUG00000018999	trit1	90	82.798	ENSGACG00000008493	trit1	100	82.798	Gasterosteus_aculeatus
ENSHBUG00000018999	trit1	79	61.804	ENSGAGG00000000522	TRIT1	92	61.932	Gopherus_agassizii
ENSHBUG00000018999	trit1	97	57.511	ENSGGOG00000010070	TRIT1	95	61.947	Gorilla_gorilla
ENSHBUG00000018999	trit1	95	58.499	ENSHGLG00000010308	-	95	58.499	Heterocephalus_glaber_female
ENSHBUG00000018999	trit1	85	56.265	ENSHGLG00000009564	-	87	56.265	Heterocephalus_glaber_female
ENSHBUG00000018999	trit1	95	58.499	ENSHGLG00100015382	-	96	58.499	Heterocephalus_glaber_male
ENSHBUG00000018999	trit1	80	46.907	ENSHGLG00100018159	-	98	46.907	Heterocephalus_glaber_male
ENSHBUG00000018999	trit1	85	76.145	ENSHCOG00000006755	trit1	98	70.561	Hippocampus_comes
ENSHBUG00000018999	trit1	98	67.234	ENSIPUG00000021822	trit1	97	67.234	Ictalurus_punctatus
ENSHBUG00000018999	trit1	90	58.691	ENSSTOG00000006446	TRIT1	91	58.691	Ictidomys_tridecemlineatus
ENSHBUG00000018999	trit1	95	52.183	ENSJJAG00000000300	-	95	52.183	Jaculus_jaculus
ENSHBUG00000018999	trit1	95	54.286	ENSJJAG00000000316	-	99	54.286	Jaculus_jaculus
ENSHBUG00000018999	trit1	100	77.824	ENSKMAG00000021788	trit1	99	77.824	Kryptolebias_marmoratus
ENSHBUG00000018999	trit1	100	82.536	ENSLBEG00000024262	trit1	100	82.536	Labrus_bergylta
ENSHBUG00000018999	trit1	92	62.108	ENSLACG00000013861	TRIT1	90	62.108	Latimeria_chalumnae
ENSHBUG00000018999	trit1	93	69.469	ENSLOCG00000002057	trit1	95	69.469	Lepisosteus_oculatus
ENSHBUG00000018999	trit1	90	60.233	ENSLAFG00000016876	TRIT1	91	60.233	Loxodonta_africana
ENSHBUG00000018999	trit1	86	62.439	ENSMFAG00000001316	TRIT1	90	64.688	Macaca_fascicularis
ENSHBUG00000018999	trit1	86	62.439	ENSMMUG00000016220	TRIT1	90	64.688	Macaca_mulatta
ENSHBUG00000018999	trit1	86	62.439	ENSMNEG00000023137	TRIT1	90	64.688	Macaca_nemestrina
ENSHBUG00000018999	trit1	86	62.439	ENSMLEG00000035296	TRIT1	90	64.688	Mandrillus_leucophaeus
ENSHBUG00000018999	trit1	100	78.675	ENSMAMG00000005868	trit1	100	78.763	Mastacembelus_armatus
ENSHBUG00000018999	trit1	100	99.163	ENSMZEG00005011506	trit1	100	99.163	Maylandia_zebra
ENSHBUG00000018999	trit1	78	59.200	ENSMGAG00000005516	TRIT1	99	59.200	Meleagris_gallopavo
ENSHBUG00000018999	trit1	86	62.683	ENSMAUG00000000399	Trit1	91	60.930	Mesocricetus_auratus
ENSHBUG00000018999	trit1	95	58.515	ENSMICG00000016294	TRIT1	95	58.515	Microcebus_murinus
ENSHBUG00000018999	trit1	86	62.195	ENSMOCG00000008173	Trit1	87	62.195	Microtus_ochrogaster
ENSHBUG00000018999	trit1	91	74.771	ENSMMOG00000021140	trit1	98	74.771	Mola_mola
ENSHBUG00000018999	trit1	86	61.244	ENSMODG00000017650	TRIT1	95	59.545	Monodelphis_domestica
ENSHBUG00000018999	trit1	100	76.778	ENSMALG00000017843	trit1	100	76.778	Monopterus_albus
ENSHBUG00000018999	trit1	98	59.062	MGP_CAROLIEiJ_G0026428	Trit1	99	58.333	Mus_caroli
ENSHBUG00000018999	trit1	98	59.062	ENSMUSG00000028653	Trit1	99	58.333	Mus_musculus
ENSHBUG00000018999	trit1	92	60.044	MGP_PahariEiJ_G0028758	Trit1	98	59.267	Mus_pahari
ENSHBUG00000018999	trit1	98	59.062	MGP_SPRETEiJ_G0027408	Trit1	99	58.333	Mus_spretus
ENSHBUG00000018999	trit1	86	62.774	ENSMPUG00000014291	TRIT1	91	61.343	Mustela_putorius_furo
ENSHBUG00000018999	trit1	86	60.976	ENSMLUG00000000334	TRIT1	91	59.767	Myotis_lucifugus
ENSHBUG00000018999	trit1	97	57.569	ENSNLEG00000012038	TRIT1	95	62.059	Nomascus_leucogenys
ENSHBUG00000018999	trit1	84	70.732	ENSMEUG00000005217	TRIT1	88	67.407	Notamacropus_eugenii
ENSHBUG00000018999	trit1	59	53.012	ENSOPRG00000003205	-	60	53.012	Ochotona_princeps
ENSHBUG00000018999	trit1	96	56.466	ENSODEG00000006117	TRIT1	99	56.000	Octodon_degus
ENSHBUG00000018999	trit1	98	96.421	ENSONIG00000015407	trit1	99	96.421	Oreochromis_niloticus
ENSHBUG00000018999	trit1	79	59.211	ENSOANG00000002779	TRIT1	95	59.211	Ornithorhynchus_anatinus
ENSHBUG00000018999	trit1	96	57.174	ENSOCUG00000002054	TRIT1	95	57.582	Oryctolagus_cuniculus
ENSHBUG00000018999	trit1	100	73.499	ENSORLG00000005802	trit1	100	73.499	Oryzias_latipes
ENSHBUG00000018999	trit1	100	73.292	ENSORLG00020005519	trit1	100	73.292	Oryzias_latipes_hni
ENSHBUG00000018999	trit1	100	73.292	ENSORLG00015018715	trit1	100	73.292	Oryzias_latipes_hsok
ENSHBUG00000018999	trit1	100	73.640	ENSOMEG00000006569	trit1	98	73.640	Oryzias_melastigma
ENSHBUG00000018999	trit1	95	59.211	ENSOGAG00000009571	TRIT1	95	59.211	Otolemur_garnettii
ENSHBUG00000018999	trit1	86	62.621	ENSOARG00000020140	TRIT1	91	61.343	Ovis_aries
ENSHBUG00000018999	trit1	97	57.511	ENSPPAG00000023930	TRIT1	95	62.059	Pan_paniscus
ENSHBUG00000018999	trit1	86	62.195	ENSPPRG00000009680	TRIT1	91	60.930	Panthera_pardus
ENSHBUG00000018999	trit1	86	62.195	ENSPTIG00000021134	TRIT1	91	60.930	Panthera_tigris_altaica
ENSHBUG00000018999	trit1	97	57.511	ENSPTRG00000000579	TRIT1	95	62.059	Pan_troglodytes
ENSHBUG00000018999	trit1	86	62.195	ENSPANG00000018125	TRIT1	90	64.375	Papio_anubis
ENSHBUG00000018999	trit1	80	67.717	ENSPKIG00000024527	trit1	97	67.717	Paramormyrops_kingsleyae
ENSHBUG00000018999	trit1	76	41.322	ENSPSIG00000017073	TRIT1	99	41.322	Pelodiscus_sinensis
ENSHBUG00000018999	trit1	82	77.354	ENSPMGG00000018445	trit1	95	78.626	Periophthalmus_magnuspinnatus
ENSHBUG00000018999	trit1	86	62.683	ENSPEMG00000022418	Trit1	91	60.739	Peromyscus_maniculatus_bairdii
ENSHBUG00000018999	trit1	79	56.283	ENSPMAG00000008892	trit1	99	54.975	Petromyzon_marinus
ENSHBUG00000018999	trit1	87	62.143	ENSPCIG00000020666	TRIT1	97	62.722	Phascolarctos_cinereus
ENSHBUG00000018999	trit1	93	80.674	ENSPFOG00000014626	trit1	94	80.674	Poecilia_formosa
ENSHBUG00000018999	trit1	70	81.194	ENSPLAG00000011669	trit1	97	79.701	Poecilia_latipinna
ENSHBUG00000018999	trit1	78	74.731	ENSPMEG00000023796	trit1	85	75.000	Poecilia_mexicana
ENSHBUG00000018999	trit1	54	76.538	ENSPMEG00000023788	trit1	93	76.538	Poecilia_mexicana
ENSHBUG00000018999	trit1	70	80.597	ENSPREG00000018182	trit1	93	79.104	Poecilia_reticulata
ENSHBUG00000018999	trit1	97	57.602	ENSPPYG00000001499	TRIT1	98	57.602	Pongo_abelii
ENSHBUG00000018999	trit1	67	59.119	ENSPCAG00000014680	TRIT1	76	71.875	Procavia_capensis
ENSHBUG00000018999	trit1	83	79.412	ENSPCOG00000014150	TRIT1	93	58.797	Propithecus_coquereli
ENSHBUG00000018999	trit1	82	73.874	ENSPVAG00000003344	TRIT1	87	67.176	Pteropus_vampyrus
ENSHBUG00000018999	trit1	65	98.382	ENSPNYG00000001003	trit1	100	98.382	Pundamilia_nyererei
ENSHBUG00000018999	trit1	90	71.230	ENSPNAG00000009466	trit1	93	71.698	Pygocentrus_nattereri
ENSHBUG00000018999	trit1	86	60.613	ENSRNOG00000014274	Trit1	87	60.613	Rattus_norvegicus
ENSHBUG00000018999	trit1	86	61.951	ENSRBIG00000043179	TRIT1	90	64.062	Rhinopithecus_bieti
ENSHBUG00000018999	trit1	86	61.951	ENSRROG00000042670	TRIT1	90	64.062	Rhinopithecus_roxellana
ENSHBUG00000018999	trit1	86	32.715	YOR274W	-	94	32.346	Saccharomyces_cerevisiae
ENSHBUG00000018999	trit1	86	61.463	ENSSBOG00000024417	TRIT1	90	64.465	Saimiri_boliviensis_boliviensis
ENSHBUG00000018999	trit1	88	54.481	ENSSHAG00000018363	TRIT1	99	54.460	Sarcophilus_harrisii
ENSHBUG00000018999	trit1	94	66.147	ENSSFOG00015007284	trit1	87	66.147	Scleropages_formosus
ENSHBUG00000018999	trit1	100	80.745	ENSSMAG00000020730	trit1	100	80.745	Scophthalmus_maximus
ENSHBUG00000018999	trit1	100	83.471	ENSSDUG00000001683	trit1	100	83.471	Seriola_dumerili
ENSHBUG00000018999	trit1	100	82.645	ENSSLDG00000008379	trit1	100	82.645	Seriola_lalandi_dorsalis
ENSHBUG00000018999	trit1	95	57.296	ENSSARG00000004540	TRIT1	98	56.632	Sorex_araneus
ENSHBUG00000018999	trit1	79	60.847	ENSSPUG00000003472	TRIT1	77	60.847	Sphenodon_punctatus
ENSHBUG00000018999	trit1	86	88.321	ENSSPAG00000020745	trit1	91	88.321	Stegastes_partitus
ENSHBUG00000018999	trit1	67	61.006	ENSSSCG00000003667	-	91	60.606	Sus_scrofa
ENSHBUG00000018999	trit1	79	57.105	ENSTGUG00000001242	TRIT1	100	57.105	Taeniopygia_guttata
ENSHBUG00000018999	trit1	100	76.507	ENSTRUG00000013936	trit1	100	76.507	Takifugu_rubripes
ENSHBUG00000018999	trit1	93	77.079	ENSTNIG00000009240	trit1	96	77.574	Tetraodon_nigroviridis
ENSHBUG00000018999	trit1	67	75.610	ENSTBEG00000001317	TRIT1	68	75.610	Tupaia_belangeri
ENSHBUG00000018999	trit1	88	61.429	ENSTTRG00000005064	TRIT1	91	60.789	Tursiops_truncatus
ENSHBUG00000018999	trit1	53	61.355	ENSUAMG00000000522	-	98	58.456	Ursus_americanus
ENSHBUG00000018999	trit1	69	60.366	ENSUAMG00000000509	-	82	60.366	Ursus_americanus
ENSHBUG00000018999	trit1	86	62.683	ENSUMAG00000017299	TRIT1	82	60.789	Ursus_maritimus
ENSHBUG00000018999	trit1	86	58.293	ENSVPAG00000003008	TRIT1	91	57.209	Vicugna_pacos
ENSHBUG00000018999	trit1	90	60.508	ENSXETG00000010952	trit1	94	60.508	Xenopus_tropicalis
ENSHBUG00000018999	trit1	70	79.403	ENSXMAG00000016302	trit1	91	77.910	Xiphophorus_maculatus