EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000019135 (Gene tree)
Gene ID: 102298229
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 183028 bases
Position: chrJH425437.1:740828-923855
Accession: 102298229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017086	TUDOR	PF00567.24	3.7e-28	1	1
ENSHBUP00000017086	SNase	PF00565.17	7e-65	1	4
ENSHBUP00000017086	SNase	PF00565.17	7e-65	2	4
ENSHBUP00000017086	SNase	PF00565.17	7e-65	3	4
ENSHBUP00000017086	SNase	PF00565.17	7e-65	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025763	-	3995	XM_014336127	ENSHBUP00000017086	908 (aa)	XP_014191613	UPI0006C9A58B

Gene Model

Click here to download ENSHBUG00000019135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019135	snd1	99	83.964	ENSG00000197157	SND1	99	83.480	Homo_sapiens
ENSHBUG00000019135	snd1	100	95.060	ENSAPOG00000017599	snd1	100	95.060	Acanthochromis_polyacanthus
ENSHBUG00000019135	snd1	99	83.187	ENSAMEG00000004664	SND1	94	83.187	Ailuropoda_melanoleuca
ENSHBUG00000019135	snd1	100	92.426	ENSACIG00000003551	snd1	100	92.536	Amphilophus_citrinellus
ENSHBUG00000019135	snd1	100	95.060	ENSAOCG00000014166	snd1	100	95.060	Amphiprion_ocellaris
ENSHBUG00000019135	snd1	100	94.841	ENSAPEG00000007067	snd1	100	94.841	Amphiprion_percula
ENSHBUG00000019135	snd1	98	94.519	ENSATEG00000018475	snd1	89	94.519	Anabas_testudineus
ENSHBUG00000019135	snd1	99	84.076	ENSANAG00000034463	SND1	99	84.312	Aotus_nancymaae
ENSHBUG00000019135	snd1	100	99.670	ENSACLG00000022897	snd1	100	99.670	Astatotilapia_calliptera
ENSHBUG00000019135	snd1	99	90.110	ENSAMXG00000016318	snd1	99	90.110	Astyanax_mexicanus
ENSHBUG00000019135	snd1	99	84.298	ENSBTAG00000010692	SND1	99	83.811	Bos_taurus
ENSHBUG00000019135	snd1	99	46.638	WBGene00006626	tsn-1	99	46.963	Caenorhabditis_elegans
ENSHBUG00000019135	snd1	99	83.853	ENSCJAG00000017668	SND1	99	84.086	Callithrix_jacchus
ENSHBUG00000019135	snd1	99	83.480	ENSCAFG00000001700	SND1	99	83.480	Canis_familiaris
ENSHBUG00000019135	snd1	99	83.480	ENSCAFG00020021639	SND1	99	83.480	Canis_lupus_dingo
ENSHBUG00000019135	snd1	99	84.187	ENSCHIG00000023390	SND1	99	83.700	Capra_hircus
ENSHBUG00000019135	snd1	70	86.667	ENSTSYG00000004979	SND1	96	86.667	Carlito_syrichta
ENSHBUG00000019135	snd1	99	72.418	ENSCAPG00000010677	SND1	99	72.418	Cavia_aperea
ENSHBUG00000019135	snd1	99	83.964	ENSCPOG00000006251	SND1	99	83.480	Cavia_porcellus
ENSHBUG00000019135	snd1	99	84.076	ENSCCAG00000036847	SND1	99	83.590	Cebus_capucinus
ENSHBUG00000019135	snd1	99	84.187	ENSCATG00000035214	SND1	99	84.424	Cercocebus_atys
ENSHBUG00000019135	snd1	99	84.187	ENSCLAG00000011796	SND1	99	83.700	Chinchilla_lanigera
ENSHBUG00000019135	snd1	99	84.187	ENSCSAG00000010182	SND1	99	83.700	Chlorocebus_sabaeus
ENSHBUG00000019135	snd1	78	76.471	ENSCHOG00000002218	SND1	86	76.471	Choloepus_hoffmanni
ENSHBUG00000019135	snd1	100	83.754	ENSCPBG00000018094	SND1	100	83.754	Chrysemys_picta_bellii
ENSHBUG00000019135	snd1	98	57.475	ENSCING00000000524	-	99	57.158	Ciona_intestinalis
ENSHBUG00000019135	snd1	99	57.314	ENSCSAVG00000008807	-	99	57.314	Ciona_savignyi
ENSHBUG00000019135	snd1	99	84.187	ENSCANG00000035119	SND1	99	83.700	Colobus_angolensis_palliatus
ENSHBUG00000019135	snd1	99	83.853	ENSCGRG00001022514	Snd1	99	83.150	Cricetulus_griseus_chok1gshd
ENSHBUG00000019135	snd1	97	84.086	ENSCGRG00000012277	Snd1	99	84.086	Cricetulus_griseus_crigri
ENSHBUG00000019135	snd1	100	92.426	ENSCSEG00000008661	snd1	100	92.426	Cynoglossus_semilaevis
ENSHBUG00000019135	snd1	100	94.072	ENSCVAG00000010316	snd1	100	94.072	Cyprinodon_variegatus
ENSHBUG00000019135	snd1	100	89.716	ENSDARG00000006766	snd1	99	91.197	Danio_rerio
ENSHBUG00000019135	snd1	98	82.340	ENSDNOG00000006795	SND1	100	82.340	Dasypus_novemcinctus
ENSHBUG00000019135	snd1	99	83.964	ENSDORG00000000336	Snd1	99	83.480	Dipodomys_ordii
ENSHBUG00000019135	snd1	98	51.094	FBgn0035121	Tudor-SN	99	50.589	Drosophila_melanogaster
ENSHBUG00000019135	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSHBUG00000019135	snd1	68	64.921	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSHBUG00000019135	snd1	99	82.804	ENSEASG00005008513	SND1	99	82.340	Equus_asinus_asinus
ENSHBUG00000019135	snd1	99	83.964	ENSECAG00000011451	SND1	99	83.480	Equus_caballus
ENSHBUG00000019135	snd1	99	74.610	ENSEEUG00000014737	SND1	99	74.229	Erinaceus_europaeus
ENSHBUG00000019135	snd1	99	88.462	ENSELUG00000001805	snd1	96	88.462	Esox_lucius
ENSHBUG00000019135	snd1	99	83.370	ENSFCAG00000008289	SND1	99	83.370	Felis_catus
ENSHBUG00000019135	snd1	99	83.929	ENSFDAG00000015881	SND1	99	83.260	Fukomys_damarensis
ENSHBUG00000019135	snd1	100	92.266	ENSFHEG00000004093	snd1	99	93.857	Fundulus_heteroclitus
ENSHBUG00000019135	snd1	75	84.746	ENSGMOG00000018932	snd1	66	84.746	Gadus_morhua
ENSHBUG00000019135	snd1	100	94.621	ENSGAFG00000008421	snd1	100	94.621	Gambusia_affinis
ENSHBUG00000019135	snd1	100	60.304	ENSGACG00000019793	snd1	100	60.304	Gasterosteus_aculeatus
ENSHBUG00000019135	snd1	99	84.187	ENSGGOG00000009614	SND1	99	84.424	Gorilla_gorilla
ENSHBUG00000019135	snd1	99	83.853	ENSHGLG00000003618	SND1	99	83.370	Heterocephalus_glaber_female
ENSHBUG00000019135	snd1	99	83.370	ENSHGLG00100012449	SND1	99	83.370	Heterocephalus_glaber_male
ENSHBUG00000019135	snd1	100	92.316	ENSHCOG00000005266	snd1	100	92.316	Hippocampus_comes
ENSHBUG00000019135	snd1	99	88.584	ENSIPUG00000013279	snd1	99	88.584	Ictalurus_punctatus
ENSHBUG00000019135	snd1	99	84.187	ENSSTOG00000002140	SND1	99	83.700	Ictidomys_tridecemlineatus
ENSHBUG00000019135	snd1	99	84.076	ENSJJAG00000009561	Snd1	99	83.590	Jaculus_jaculus
ENSHBUG00000019135	snd1	100	94.182	ENSKMAG00000016997	snd1	100	94.182	Kryptolebias_marmoratus
ENSHBUG00000019135	snd1	100	93.194	ENSLBEG00000013563	snd1	100	93.194	Labrus_bergylta
ENSHBUG00000019135	snd1	98	88.606	ENSLOCG00000015537	snd1	99	87.813	Lepisosteus_oculatus
ENSHBUG00000019135	snd1	99	83.921	ENSLAFG00000009696	SND1	99	83.921	Loxodonta_africana
ENSHBUG00000019135	snd1	99	84.187	ENSMFAG00000038114	SND1	99	84.424	Macaca_fascicularis
ENSHBUG00000019135	snd1	99	84.187	ENSMMUG00000015432	SND1	99	83.700	Macaca_mulatta
ENSHBUG00000019135	snd1	99	84.187	ENSMNEG00000039808	SND1	100	84.442	Macaca_nemestrina
ENSHBUG00000019135	snd1	99	84.076	ENSMLEG00000029040	SND1	100	84.329	Mandrillus_leucophaeus
ENSHBUG00000019135	snd1	100	94.951	ENSMAMG00000011739	snd1	100	94.951	Mastacembelus_armatus
ENSHBUG00000019135	snd1	100	99.670	ENSMZEG00005005681	snd1	100	99.670	Maylandia_zebra
ENSHBUG00000019135	snd1	99	84.076	ENSMICG00000000097	SND1	99	83.590	Microcebus_murinus
ENSHBUG00000019135	snd1	99	84.298	ENSMOCG00000005040	Snd1	99	83.811	Microtus_ochrogaster
ENSHBUG00000019135	snd1	100	93.853	ENSMMOG00000001795	snd1	100	93.853	Mola_mola
ENSHBUG00000019135	snd1	99	83.929	ENSMODG00000015182	SND1	99	83.260	Monodelphis_domestica
ENSHBUG00000019135	snd1	100	94.182	ENSMALG00000012071	snd1	100	94.182	Monopterus_albus
ENSHBUG00000019135	snd1	99	84.152	MGP_CAROLIEiJ_G0028159	Snd1	99	84.941	Mus_caroli
ENSHBUG00000019135	snd1	99	83.929	ENSMUSG00000001424	Snd1	99	83.278	Mus_musculus
ENSHBUG00000019135	snd1	99	84.152	MGP_PahariEiJ_G0021917	Snd1	99	84.941	Mus_pahari
ENSHBUG00000019135	snd1	99	84.152	MGP_SPRETEiJ_G0029159	Snd1	99	83.609	Mus_spretus
ENSHBUG00000019135	snd1	99	83.370	ENSMPUG00000006545	SND1	99	83.370	Mustela_putorius_furo
ENSHBUG00000019135	snd1	97	83.166	ENSMLUG00000017130	SND1	99	83.166	Myotis_lucifugus
ENSHBUG00000019135	snd1	99	83.964	ENSNGAG00000011186	Snd1	99	83.480	Nannospalax_galili
ENSHBUG00000019135	snd1	100	99.670	ENSNBRG00000006681	snd1	100	99.670	Neolamprologus_brichardi
ENSHBUG00000019135	snd1	99	83.700	ENSNLEG00000012263	SND1	100	84.442	Nomascus_leucogenys
ENSHBUG00000019135	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSHBUG00000019135	snd1	99	84.187	ENSODEG00000011502	SND1	99	83.757	Octodon_degus
ENSHBUG00000019135	snd1	100	99.121	ENSONIG00000011481	snd1	97	99.121	Oreochromis_niloticus
ENSHBUG00000019135	snd1	98	83.596	ENSOANG00000000817	SND1	99	82.269	Ornithorhynchus_anatinus
ENSHBUG00000019135	snd1	99	82.930	ENSOCUG00000001620	SND1	99	82.930	Oryctolagus_cuniculus
ENSHBUG00000019135	snd1	98	93.400	ENSORLG00000015201	snd1	100	92.865	Oryzias_latipes
ENSHBUG00000019135	snd1	98	93.624	ENSORLG00020013991	snd1	100	93.085	Oryzias_latipes_hni
ENSHBUG00000019135	snd1	98	93.624	ENSORLG00015012436	snd1	100	93.085	Oryzias_latipes_hsok
ENSHBUG00000019135	snd1	100	93.633	ENSOMEG00000006406	snd1	100	93.633	Oryzias_melastigma
ENSHBUG00000019135	snd1	99	84.000	ENSOGAG00000013356	SND1	93	83.516	Otolemur_garnettii
ENSHBUG00000019135	snd1	98	82.074	ENSOARG00000002149	SND1	100	82.074	Ovis_aries
ENSHBUG00000019135	snd1	99	84.076	ENSPPAG00000042947	SND1	99	83.705	Pan_paniscus
ENSHBUG00000019135	snd1	99	83.370	ENSPPRG00000004494	SND1	99	83.370	Panthera_pardus
ENSHBUG00000019135	snd1	99	83.260	ENSPTIG00000014214	SND1	99	83.260	Panthera_tigris_altaica
ENSHBUG00000019135	snd1	99	84.076	ENSPTRG00000023911	SND1	99	84.312	Pan_troglodytes
ENSHBUG00000019135	snd1	97	84.424	ENSPANG00000011997	SND1	99	84.424	Papio_anubis
ENSHBUG00000019135	snd1	99	86.755	ENSPKIG00000023494	snd1	99	86.230	Paramormyrops_kingsleyae
ENSHBUG00000019135	snd1	92	93.660	ENSPMGG00000003629	snd1	100	93.660	Periophthalmus_magnuspinnatus
ENSHBUG00000019135	snd1	99	84.076	ENSPEMG00000010240	Snd1	99	83.590	Peromyscus_maniculatus_bairdii
ENSHBUG00000019135	snd1	97	73.928	ENSPMAG00000007915	-	99	73.928	Petromyzon_marinus
ENSHBUG00000019135	snd1	99	84.487	ENSPCIG00000011561	SND1	99	83.811	Phascolarctos_cinereus
ENSHBUG00000019135	snd1	100	94.621	ENSPFOG00000001557	snd1	100	94.621	Poecilia_formosa
ENSHBUG00000019135	snd1	100	94.841	ENSPLAG00000018459	snd1	97	94.841	Poecilia_latipinna
ENSHBUG00000019135	snd1	100	94.621	ENSPMEG00000006803	snd1	100	94.621	Poecilia_mexicana
ENSHBUG00000019135	snd1	100	94.512	ENSPREG00000002189	snd1	100	94.512	Poecilia_reticulata
ENSHBUG00000019135	snd1	91	91.667	ENSPPYG00000017972	SND1	99	91.667	Pongo_abelii
ENSHBUG00000019135	snd1	99	74.276	ENSPCAG00000011305	SND1	99	73.899	Procavia_capensis
ENSHBUG00000019135	snd1	99	84.187	ENSPCOG00000026791	SND1	100	84.442	Propithecus_coquereli
ENSHBUG00000019135	snd1	99	82.405	ENSPVAG00000013945	SND1	99	81.938	Pteropus_vampyrus
ENSHBUG00000019135	snd1	100	99.560	ENSPNYG00000000932	snd1	100	99.560	Pundamilia_nyererei
ENSHBUG00000019135	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSHBUG00000019135	snd1	99	83.929	ENSRNOG00000031173	Snd1	100	83.089	Rattus_norvegicus
ENSHBUG00000019135	snd1	70	87.079	ENSRBIG00000027782	-	93	87.121	Rhinopithecus_bieti
ENSHBUG00000019135	snd1	99	84.187	ENSRROG00000033020	SND1	99	83.700	Rhinopithecus_roxellana
ENSHBUG00000019135	snd1	99	84.076	ENSSBOG00000032461	SND1	99	84.312	Saimiri_boliviensis_boliviensis
ENSHBUG00000019135	snd1	98	81.124	ENSSHAG00000015359	SND1	100	81.124	Sarcophilus_harrisii
ENSHBUG00000019135	snd1	98	87.805	ENSSFOG00015001103	snd1	99	86.928	Scleropages_formosus
ENSHBUG00000019135	snd1	98	94.183	ENSSMAG00000001932	snd1	95	93.633	Scophthalmus_maximus
ENSHBUG00000019135	snd1	100	94.951	ENSSDUG00000002699	snd1	94	94.951	Seriola_dumerili
ENSHBUG00000019135	snd1	100	87.706	ENSSLDG00000001950	snd1	100	87.706	Seriola_lalandi_dorsalis
ENSHBUG00000019135	snd1	86	79.381	ENSSARG00000004877	SND1	92	79.381	Sorex_araneus
ENSHBUG00000019135	snd1	70	80.243	ENSSPUG00000017586	SND1	96	80.243	Sphenodon_punctatus
ENSHBUG00000019135	snd1	73	94.247	ENSSPAG00000021398	snd1	99	94.247	Stegastes_partitus
ENSHBUG00000019135	snd1	99	84.187	ENSSSCG00000016590	SND1	99	83.700	Sus_scrofa
ENSHBUG00000019135	snd1	100	93.792	ENSTRUG00000014067	snd1	100	91.987	Takifugu_rubripes
ENSHBUG00000019135	snd1	100	92.975	ENSTNIG00000011019	snd1	100	92.975	Tetraodon_nigroviridis
ENSHBUG00000019135	snd1	94	78.588	ENSTBEG00000003999	SND1	100	78.588	Tupaia_belangeri
ENSHBUG00000019135	snd1	99	79.955	ENSTTRG00000006059	SND1	99	79.515	Tursiops_truncatus
ENSHBUG00000019135	snd1	68	76.455	ENSUAMG00000002820	-	88	75.926	Ursus_americanus
ENSHBUG00000019135	snd1	87	83.840	ENSUAMG00000005604	-	93	83.840	Ursus_americanus
ENSHBUG00000019135	snd1	99	83.480	ENSUMAG00000005960	SND1	99	83.480	Ursus_maritimus
ENSHBUG00000019135	snd1	78	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSHBUG00000019135	snd1	99	83.370	ENSVVUG00000007226	SND1	99	83.370	Vulpes_vulpes
ENSHBUG00000019135	snd1	97	81.060	ENSXETG00000023043	snd1	100	81.050	Xenopus_tropicalis
ENSHBUG00000019135	snd1	93	91.924	ENSXCOG00000013629	snd1	99	91.924	Xiphophorus_couchianus
ENSHBUG00000019135	snd1	100	95.060	ENSXMAG00000011469	snd1	100	95.060	Xiphophorus_maculatus