EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019225 (Gene tree)
Gene ID: 102291170
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 72681 bases
Position: chrJH425563.1:128327-201007
Accession: 102291170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017210	ResIII	PF04851.15	5.8e-06	1	1
ENSHBUP00000017210	BRK	PF07533.16	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025932	-	13070	XM_005938184	ENSHBUP00000017210	3316 (aa)	XP_005938246	UPI0003BC9D3E

Gene Model

Click here to download ENSHBUG00000019225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019225	chd7	66	58.358	ENSHBUG00000014701	chd6	58	61.889
ENSHBUG00000019225	chd7	59	69.597	ENSHBUG00000023322	chd9	77	76.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019225	chd7	84	80.337	ENSG00000171316	CHD7	97	64.516	Homo_sapiens
ENSHBUG00000019225	chd7	77	88.649	ENSAPOG00000009351	chd7	98	84.379	Acanthochromis_polyacanthus
ENSHBUG00000019225	chd7	56	67.295	ENSAMEG00000006307	CHD8	61	69.261	Ailuropoda_melanoleuca
ENSHBUG00000019225	chd7	83	80.337	ENSAMEG00000005699	CHD7	74	80.177	Ailuropoda_melanoleuca
ENSHBUG00000019225	chd7	71	82.280	ENSACIG00000001590	chd7	99	82.280	Amphilophus_citrinellus
ENSHBUG00000019225	chd7	72	88.971	ENSAOCG00000002337	chd7	100	88.093	Amphiprion_ocellaris
ENSHBUG00000019225	chd7	98	86.725	ENSAPEG00000010332	chd7	77	88.176	Amphiprion_percula
ENSHBUG00000019225	chd7	70	88.017	ENSATEG00000002590	chd7	99	83.127	Anabas_testudineus
ENSHBUG00000019225	chd7	86	79.874	ENSAPLG00000005873	CHD7	74	80.176	Anas_platyrhynchos
ENSHBUG00000019225	chd7	61	80.016	ENSACAG00000005760	CHD7	74	79.775	Anolis_carolinensis
ENSHBUG00000019225	chd7	85	80.337	ENSANAG00000035300	CHD7	74	80.177	Aotus_nancymaae
ENSHBUG00000019225	chd7	76	68.419	ENSAMXG00000006180	chd7	95	68.981	Astyanax_mexicanus
ENSHBUG00000019225	chd7	68	80.257	ENSBTAG00000021841	CHD7	79	80.257	Bos_taurus
ENSHBUG00000019225	chd7	85	80.337	ENSCJAG00000009025	CHD7	74	80.177	Callithrix_jacchus
ENSHBUG00000019225	chd7	51	67.295	ENSCAFG00000005626	CHD8	73	69.427	Canis_familiaris
ENSHBUG00000019225	chd7	91	80.257	ENSCAFG00000007167	CHD7	70	80.096	Canis_familiaris
ENSHBUG00000019225	chd7	50	70.738	ENSCAFG00020014565	CHD8	81	73.848	Canis_lupus_dingo
ENSHBUG00000019225	chd7	91	79.341	ENSCAFG00020015856	CHD7	70	79.213	Canis_lupus_dingo
ENSHBUG00000019225	chd7	87	78.769	ENSCHIG00000011729	CHD7	70	80.337	Capra_hircus
ENSHBUG00000019225	chd7	51	67.042	ENSTSYG00000011939	CHD8	62	68.908	Carlito_syrichta
ENSHBUG00000019225	chd7	85	80.096	ENSTSYG00000004018	CHD7	74	79.936	Carlito_syrichta
ENSHBUG00000019225	chd7	89	75.441	ENSCAPG00000007952	CHD7	74	64.762	Cavia_aperea
ENSHBUG00000019225	chd7	89	80.658	ENSCPOG00000013385	CHD7	74	80.498	Cavia_porcellus
ENSHBUG00000019225	chd7	85	80.353	ENSCCAG00000025831	CHD7	52	51.469	Cebus_capucinus
ENSHBUG00000019225	chd7	85	80.337	ENSCATG00000020229	CHD7	74	80.177	Cercocebus_atys
ENSHBUG00000019225	chd7	86	80.337	ENSCLAG00000004679	CHD7	74	80.177	Chinchilla_lanigera
ENSHBUG00000019225	chd7	85	80.257	ENSCSAG00000014349	CHD7	74	80.096	Chlorocebus_sabaeus
ENSHBUG00000019225	chd7	50	81.211	ENSCHOG00000008478	CHD7	80	80.244	Choloepus_hoffmanni
ENSHBUG00000019225	chd7	91	80.047	ENSCPBG00000021517	CHD7	96	81.646	Chrysemys_picta_bellii
ENSHBUG00000019225	chd7	85	80.177	ENSCANG00000041382	CHD7	74	80.016	Colobus_angolensis_palliatus
ENSHBUG00000019225	chd7	88	80.257	ENSCGRG00001011949	Chd7	71	80.096	Cricetulus_griseus_chok1gshd
ENSHBUG00000019225	chd7	52	67.523	ENSCGRG00001014351	Chd8	62	69.506	Cricetulus_griseus_chok1gshd
ENSHBUG00000019225	chd7	91	63.333	ENSCGRG00000000481	Chd7	71	75.201	Cricetulus_griseus_crigri
ENSHBUG00000019225	chd7	52	67.523	ENSCGRG00000009710	Chd8	65	69.506	Cricetulus_griseus_crigri
ENSHBUG00000019225	chd7	71	84.422	ENSCSEG00000017886	chd7	99	84.447	Cynoglossus_semilaevis
ENSHBUG00000019225	chd7	98	82.758	ENSCVAG00000017584	chd7	99	82.855	Cyprinodon_variegatus
ENSHBUG00000019225	chd7	77	69.465	ENSDARG00000075211	chd7	95	70.264	Danio_rerio
ENSHBUG00000019225	chd7	68	80.578	ENSDNOG00000011674	CHD7	74	80.417	Dasypus_novemcinctus
ENSHBUG00000019225	chd7	85	80.096	ENSDORG00000003515	Chd7	74	79.936	Dipodomys_ordii
ENSHBUG00000019225	chd7	53	77.500	ENSETEG00000016689	-	56	77.848	Echinops_telfairi
ENSHBUG00000019225	chd7	56	65.241	ENSEBUG00000007607	chd8	64	70.673	Eptatretus_burgeri
ENSHBUG00000019225	chd7	87	80.593	ENSEASG00005016258	CHD7	74	68.157	Equus_asinus_asinus
ENSHBUG00000019225	chd7	87	80.593	ENSECAG00000001445	CHD7	91	80.433	Equus_caballus
ENSHBUG00000019225	chd7	51	62.933	ENSECAG00000016102	CHD8	62	69.347	Equus_caballus
ENSHBUG00000019225	chd7	77	84.349	ENSEEUG00000013559	CHD7	75	78.852	Erinaceus_europaeus
ENSHBUG00000019225	chd7	82	80.178	ENSELUG00000024442	chd7	90	80.793	Esox_lucius
ENSHBUG00000019225	chd7	87	80.449	ENSFCAG00000003849	CHD7	71	80.288	Felis_catus
ENSHBUG00000019225	chd7	63	80.417	ENSFALG00000005570	CHD7	74	68.415	Ficedula_albicollis
ENSHBUG00000019225	chd7	86	80.080	ENSFDAG00000000528	CHD7	52	50.830	Fukomys_damarensis
ENSHBUG00000019225	chd7	100	81.851	ENSFHEG00000001311	chd7	99	81.963	Fundulus_heteroclitus
ENSHBUG00000019225	chd7	56	86.550	ENSGMOG00000004232	chd7	94	87.131	Gadus_morhua
ENSHBUG00000019225	chd7	82	79.795	ENSGALG00000041080	CHD7	74	80.096	Gallus_gallus
ENSHBUG00000019225	chd7	80	83.513	ENSGAFG00000006858	chd7	90	86.118	Gambusia_affinis
ENSHBUG00000019225	chd7	66	86.602	ENSGACG00000014897	chd7	99	75.010	Gasterosteus_aculeatus
ENSHBUG00000019225	chd7	75	81.475	ENSGAGG00000017996	CHD7	95	81.205	Gopherus_agassizii
ENSHBUG00000019225	chd7	84	80.417	ENSGGOG00000012224	CHD7	74	80.257	Gorilla_gorilla
ENSHBUG00000019225	chd7	71	80.338	ENSHGLG00000017268	CHD7	74	80.177	Heterocephalus_glaber_female
ENSHBUG00000019225	chd7	67	80.338	ENSHGLG00100015649	CHD7	74	80.177	Heterocephalus_glaber_male
ENSHBUG00000019225	chd7	99	77.361	ENSHCOG00000014380	chd7	99	79.814	Hippocampus_comes
ENSHBUG00000019225	chd7	65	78.125	ENSIPUG00000007585	chd7	95	63.908	Ictalurus_punctatus
ENSHBUG00000019225	chd7	56	67.447	ENSSTOG00000001854	CHD8	62	69.427	Ictidomys_tridecemlineatus
ENSHBUG00000019225	chd7	87	80.498	ENSSTOG00000011949	CHD7	71	80.337	Ictidomys_tridecemlineatus
ENSHBUG00000019225	chd7	87	80.337	ENSJJAG00000022064	Chd7	52	50.958	Jaculus_jaculus
ENSHBUG00000019225	chd7	98	84.587	ENSKMAG00000009724	chd7	99	83.924	Kryptolebias_marmoratus
ENSHBUG00000019225	chd7	100	82.119	ENSLBEG00000020842	chd7	77	85.151	Labrus_bergylta
ENSHBUG00000019225	chd7	66	81.255	ENSLACG00000002461	CHD7	75	62.864	Latimeria_chalumnae
ENSHBUG00000019225	chd7	61	82.292	ENSLOCG00000005062	chd7	95	54.300	Lepisosteus_oculatus
ENSHBUG00000019225	chd7	85	80.337	ENSMFAG00000041825	CHD7	88	80.177	Macaca_fascicularis
ENSHBUG00000019225	chd7	85	80.337	ENSMMUG00000011584	CHD7	74	80.177	Macaca_mulatta
ENSHBUG00000019225	chd7	85	80.337	ENSMNEG00000040978	CHD7	74	80.177	Macaca_nemestrina
ENSHBUG00000019225	chd7	85	80.337	ENSMLEG00000038817	CHD7	74	80.177	Mandrillus_leucophaeus
ENSHBUG00000019225	chd7	100	82.141	ENSMAMG00000011569	chd7	100	82.285	Mastacembelus_armatus
ENSHBUG00000019225	chd7	100	99.638	ENSMZEG00005010646	chd7	100	99.638	Maylandia_zebra
ENSHBUG00000019225	chd7	80	79.716	ENSMGAG00000011092	CHD7	74	80.096	Meleagris_gallopavo
ENSHBUG00000019225	chd7	84	82.616	ENSMAUG00000001000	Chd7	72	82.616	Mesocricetus_auratus
ENSHBUG00000019225	chd7	60	67.523	ENSMICG00000007735	CHD8	69	69.427	Microcebus_murinus
ENSHBUG00000019225	chd7	87	80.417	ENSMICG00000002430	CHD7	74	80.257	Microcebus_murinus
ENSHBUG00000019225	chd7	53	67.523	ENSMOCG00000013700	Chd8	57	69.506	Microtus_ochrogaster
ENSHBUG00000019225	chd7	51	66.366	ENSMMOG00000021538	-	88	82.589	Mola_mola
ENSHBUG00000019225	chd7	51	67.296	ENSMODG00000006219	CHD8	67	69.347	Monodelphis_domestica
ENSHBUG00000019225	chd7	86	80.253	ENSMODG00000008488	CHD7	74	68.957	Monodelphis_domestica
ENSHBUG00000019225	chd7	74	85.167	ENSMALG00000004389	chd7	99	84.758	Monopterus_albus
ENSHBUG00000019225	chd7	51	67.372	MGP_CAROLIEiJ_G0019237	Chd8	69	69.347	Mus_caroli
ENSHBUG00000019225	chd7	83	80.096	MGP_CAROLIEiJ_G0025797	Chd7	71	79.936	Mus_caroli
ENSHBUG00000019225	chd7	51	67.447	ENSMUSG00000053754	Chd8	80	63.135	Mus_musculus
ENSHBUG00000019225	chd7	66	80.257	ENSMUSG00000041235	Chd7	70	80.096	Mus_musculus
ENSHBUG00000019225	chd7	71	80.177	MGP_PahariEiJ_G0023920	Chd7	74	80.016	Mus_pahari
ENSHBUG00000019225	chd7	68	80.177	MGP_SPRETEiJ_G0026745	Chd7	74	80.016	Mus_spretus
ENSHBUG00000019225	chd7	56	67.447	ENSMPUG00000000174	CHD8	62	69.427	Mustela_putorius_furo
ENSHBUG00000019225	chd7	57	80.257	ENSMPUG00000002338	CHD7	79	80.096	Mustela_putorius_furo
ENSHBUG00000019225	chd7	56	67.447	ENSMLUG00000001878	CHD8	62	69.427	Myotis_lucifugus
ENSHBUG00000019225	chd7	84	78.678	ENSMLUG00000015266	CHD7	70	77.787	Myotis_lucifugus
ENSHBUG00000019225	chd7	94	59.570	ENSNGAG00000010767	Chd7	74	80.096	Nannospalax_galili
ENSHBUG00000019225	chd7	76	96.757	ENSNBRG00000001280	chd7	98	96.757	Neolamprologus_brichardi
ENSHBUG00000019225	chd7	50	59.986	ENSNBRG00000017428	chd8	60	64.710	Neolamprologus_brichardi
ENSHBUG00000019225	chd7	84	80.337	ENSNLEG00000002027	CHD7	74	80.177	Nomascus_leucogenys
ENSHBUG00000019225	chd7	52	62.311	ENSMEUG00000011732	CHD8	66	63.803	Notamacropus_eugenii
ENSHBUG00000019225	chd7	72	74.614	ENSMEUG00000010045	CHD7	82	74.194	Notamacropus_eugenii
ENSHBUG00000019225	chd7	51	64.324	ENSOPRG00000016120	CHD8	73	65.976	Ochotona_princeps
ENSHBUG00000019225	chd7	85	80.498	ENSODEG00000002424	CHD7	74	80.096	Octodon_degus
ENSHBUG00000019225	chd7	97	87.720	ENSONIG00000016614	chd7	100	88.772	Oreochromis_niloticus
ENSHBUG00000019225	chd7	68	80.658	ENSOCUG00000010034	CHD7	91	80.498	Oryctolagus_cuniculus
ENSHBUG00000019225	chd7	99	81.936	ENSORLG00000013492	chd7	77	83.107	Oryzias_latipes
ENSHBUG00000019225	chd7	99	81.791	ENSORLG00020020002	chd7	77	83.036	Oryzias_latipes_hni
ENSHBUG00000019225	chd7	99	81.763	ENSORLG00015020858	chd7	75	83.782	Oryzias_latipes_hsok
ENSHBUG00000019225	chd7	99	82.158	ENSOMEG00000016881	chd7	99	81.949	Oryzias_melastigma
ENSHBUG00000019225	chd7	85	80.498	ENSOGAG00000013905	CHD7	74	80.337	Otolemur_garnettii
ENSHBUG00000019225	chd7	67	75.486	ENSOARG00000016176	CHD7	70	80.257	Ovis_aries
ENSHBUG00000019225	chd7	84	80.337	ENSPPAG00000033330	CHD7	74	80.177	Pan_paniscus
ENSHBUG00000019225	chd7	88	80.513	ENSPPRG00000022248	CHD7	70	80.353	Panthera_pardus
ENSHBUG00000019225	chd7	84	79.407	ENSPTIG00000011702	CHD7	71	72.332	Panthera_tigris_altaica
ENSHBUG00000019225	chd7	56	67.447	ENSPTIG00000021989	CHD8	69	69.427	Panthera_tigris_altaica
ENSHBUG00000019225	chd7	84	80.337	ENSPTRG00000020286	CHD7	74	80.177	Pan_troglodytes
ENSHBUG00000019225	chd7	85	80.337	ENSPANG00000018419	CHD7	74	80.177	Papio_anubis
ENSHBUG00000019225	chd7	84	80.723	ENSPSIG00000012003	CHD7	74	69.007	Pelodiscus_sinensis
ENSHBUG00000019225	chd7	73	84.802	ENSPMGG00000018543	chd7	96	87.250	Periophthalmus_magnuspinnatus
ENSHBUG00000019225	chd7	51	67.523	ENSPEMG00000022977	Chd8	62	69.968	Peromyscus_maniculatus_bairdii
ENSHBUG00000019225	chd7	68	82.216	ENSPCIG00000000025	-	94	80.802	Phascolarctos_cinereus
ENSHBUG00000019225	chd7	51	66.994	ENSPCIG00000020931	CHD8	72	71.275	Phascolarctos_cinereus
ENSHBUG00000019225	chd7	58	64.518	ENSPFOG00000010939	-	82	64.993	Poecilia_formosa
ENSHBUG00000019225	chd7	99	82.885	ENSPFOG00000004891	chd7	92	98.701	Poecilia_formosa
ENSHBUG00000019225	chd7	99	82.739	ENSPLAG00000023322	chd7	99	82.764	Poecilia_latipinna
ENSHBUG00000019225	chd7	74	87.981	ENSPMEG00000005879	chd7	96	88.881	Poecilia_mexicana
ENSHBUG00000019225	chd7	56	94.075	ENSPREG00000014744	chd7	96	79.070	Poecilia_reticulata
ENSHBUG00000019225	chd7	56	67.447	ENSPPYG00000005596	CHD8	61	69.427	Pongo_abelii
ENSHBUG00000019225	chd7	84	80.337	ENSPPYG00000018618	CHD7	74	80.177	Pongo_abelii
ENSHBUG00000019225	chd7	67	75.155	ENSPCAG00000000227	CHD7	72	75.441	Procavia_capensis
ENSHBUG00000019225	chd7	56	66.868	ENSPCOG00000014628	CHD8	62	68.750	Propithecus_coquereli
ENSHBUG00000019225	chd7	85	80.016	ENSPCOG00000013850	CHD7	74	79.856	Propithecus_coquereli
ENSHBUG00000019225	chd7	84	83.080	ENSPVAG00000011873	CHD7	82	74.186	Pteropus_vampyrus
ENSHBUG00000019225	chd7	76	96.774	ENSPNYG00000012490	chd7	99	96.774	Pundamilia_nyererei
ENSHBUG00000019225	chd7	64	78.467	ENSPNAG00000011245	chd7	95	78.613	Pygocentrus_nattereri
ENSHBUG00000019225	chd7	94	60.105	ENSRNOG00000006689	Chd7	71	80.513	Rattus_norvegicus
ENSHBUG00000019225	chd7	55	67.572	ENSRNOG00000025011	Chd8	63	69.555	Rattus_norvegicus
ENSHBUG00000019225	chd7	85	79.438	ENSRBIG00000043575	CHD7	74	79.277	Rhinopithecus_bieti
ENSHBUG00000019225	chd7	85	80.353	ENSRROG00000008981	CHD7	74	80.192	Rhinopithecus_roxellana
ENSHBUG00000019225	chd7	85	80.337	ENSSBOG00000021462	CHD7	74	80.177	Saimiri_boliviensis_boliviensis
ENSHBUG00000019225	chd7	81	80.174	ENSSHAG00000011522	CHD7	74	68.671	Sarcophilus_harrisii
ENSHBUG00000019225	chd7	50	67.296	ENSSHAG00000008118	CHD8	63	69.133	Sarcophilus_harrisii
ENSHBUG00000019225	chd7	93	58.350	ENSSFOG00015015077	chd7	98	63.291	Scleropages_formosus
ENSHBUG00000019225	chd7	51	65.796	ENSSMAG00000001453	-	65	69.990	Scophthalmus_maximus
ENSHBUG00000019225	chd7	53	80.448	ENSSMAG00000001030	chd7	97	75.150	Scophthalmus_maximus
ENSHBUG00000019225	chd7	100	83.467	ENSSDUG00000013773	chd7	100	84.014	Seriola_dumerili
ENSHBUG00000019225	chd7	50	94.737	ENSSLDG00000022595	chd7	93	95.294	Seriola_lalandi_dorsalis
ENSHBUG00000019225	chd7	61	80.154	ENSSARG00000003387	CHD7	66	83.198	Sorex_araneus
ENSHBUG00000019225	chd7	82	78.628	ENSSPUG00000009235	CHD7	92	78.230	Sphenodon_punctatus
ENSHBUG00000019225	chd7	76	89.393	ENSSPAG00000006320	chd7	99	88.923	Stegastes_partitus
ENSHBUG00000019225	chd7	87	79.133	ENSSSCG00000006231	CHD7	74	80.177	Sus_scrofa
ENSHBUG00000019225	chd7	65	80.417	ENSTGUG00000011196	CHD7	74	68.614	Taeniopygia_guttata
ENSHBUG00000019225	chd7	69	79.589	ENSTRUG00000008632	chd7	100	79.134	Takifugu_rubripes
ENSHBUG00000019225	chd7	68	91.680	ENSTNIG00000002647	chd7	99	78.797	Tetraodon_nigroviridis
ENSHBUG00000019225	chd7	84	79.133	ENSUAMG00000025734	CHD7	98	76.866	Ursus_americanus
ENSHBUG00000019225	chd7	56	67.447	ENSUMAG00000004045	CHD8	71	73.440	Ursus_maritimus
ENSHBUG00000019225	chd7	81	79.180	ENSUMAG00000010436	CHD7	92	75.914	Ursus_maritimus
ENSHBUG00000019225	chd7	88	80.257	ENSVVUG00000018063	CHD7	70	80.096	Vulpes_vulpes
ENSHBUG00000019225	chd7	51	67.447	ENSVVUG00000009444	CHD8	65	69.427	Vulpes_vulpes
ENSHBUG00000019225	chd7	93	63.005	ENSXETG00000026004	chd8	76	68.750	Xenopus_tropicalis
ENSHBUG00000019225	chd7	100	81.821	ENSXMAG00000018590	chd7	76	85.538	Xiphophorus_maculatus