EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000019261 (Gene tree)
Gene ID: 102293940
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9404 bases
Position: chrJH425384.1:119283-128686
Accession: 102293940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000032765	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000025974	-	2330	-	ENSHBUP00000017249	208 (aa)	-	-
ENSHBUT00000025969	-	2927	-	ENSHBUP00000017243	224 (aa)	-	-
ENSHBUT00000025970	-	2657	XM_005924117	ENSHBUP00000032765	209 (aa)	XP_005924179	UPI0003AFC909

Gene Model

Click here to download ENSHBUG00000019261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000019261	si:dkey-16l2.16	74	35.256	ENSHBUG00000001462	RAB17	68	35.256
ENSHBUG00000019261	si:dkey-16l2.16	78	42.073	ENSHBUG00000022562	-	76	41.718
ENSHBUG00000019261	si:dkey-16l2.16	81	50.000	ENSHBUG00000003728	-	85	50.000
ENSHBUG00000019261	si:dkey-16l2.16	78	42.424	ENSHBUG00000008497	rab12	69	41.916
ENSHBUG00000019261	si:dkey-16l2.16	97	35.071	ENSHBUG00000012594	RAB29	82	38.596
ENSHBUG00000019261	si:dkey-16l2.16	98	52.857	ENSHBUG00000002397	-	77	63.190
ENSHBUG00000019261	si:dkey-16l2.16	75	46.835	ENSHBUG00000003876	rab25a	75	46.835
ENSHBUG00000019261	si:dkey-16l2.16	95	35.071	ENSHBUG00000016064	rab34a	64	38.462
ENSHBUG00000019261	si:dkey-16l2.16	67	33.813	ENSHBUG00000007966	rab23	78	33.125
ENSHBUG00000019261	si:dkey-16l2.16	77	46.951	ENSHBUG00000003539	RAB39B	75	48.125
ENSHBUG00000019261	si:dkey-16l2.16	74	36.875	ENSHBUG00000009027	-	80	35.503
ENSHBUG00000019261	si:dkey-16l2.16	82	46.243	ENSHBUG00000017620	-	82	46.243
ENSHBUG00000019261	si:dkey-16l2.16	55	30.172	ENSHBUG00000007301	arl5c	62	30.172
ENSHBUG00000019261	si:dkey-16l2.16	53	35.714	ENSHBUG00000015310	RAP2B	93	35.484
ENSHBUG00000019261	si:dkey-16l2.16	98	38.571	ENSHBUG00000019164	rab2a	75	46.541
ENSHBUG00000019261	si:dkey-16l2.16	79	40.719	ENSHBUG00000006823	-	75	40.719
ENSHBUG00000019261	si:dkey-16l2.16	98	42.439	ENSHBUG00000009320	rab25b	77	46.053
ENSHBUG00000019261	si:dkey-16l2.16	83	30.460	ENSHBUG00000010964	rabl2	76	30.460
ENSHBUG00000019261	si:dkey-16l2.16	55	32.203	ENSHBUG00000005802	arl4d	58	32.203
ENSHBUG00000019261	si:dkey-16l2.16	80	38.728	ENSHBUG00000009014	-	83	38.728
ENSHBUG00000019261	si:dkey-16l2.16	75	45.570	ENSHBUG00000003752	rab5aa	72	46.154
ENSHBUG00000019261	si:dkey-16l2.16	78	36.095	ENSHBUG00000007788	rheb	88	36.095
ENSHBUG00000019261	si:dkey-16l2.16	78	62.577	ENSHBUG00000010304	rab1ab	80	62.963
ENSHBUG00000019261	si:dkey-16l2.16	82	34.091	ENSHBUG00000011397	si:cabz01085950.1	83	34.731
ENSHBUG00000019261	si:dkey-16l2.16	95	41.791	ENSHBUG00000023035	rab11a	87	40.704
ENSHBUG00000019261	si:dkey-16l2.16	84	45.810	ENSHBUG00000003696	rab18b	84	46.821
ENSHBUG00000019261	si:dkey-16l2.16	77	40.244	ENSHBUG00000000890	rab6a	74	40.260
ENSHBUG00000019261	si:dkey-16l2.16	98	40.670	ENSHBUG00000014777	rab11bb	80	44.828
ENSHBUG00000019261	si:dkey-16l2.16	76	32.099	ENSHBUG00000003805	-	77	32.099
ENSHBUG00000019261	si:dkey-16l2.16	73	48.387	ENSHBUG00000001518	rab18a	75	48.387
ENSHBUG00000019261	si:dkey-16l2.16	69	48.649	ENSHBUG00000013162	rab33ba	72	48.649
ENSHBUG00000019261	si:dkey-16l2.16	74	33.540	ENSHBUG00000001491	dnajc27	62	32.919
ENSHBUG00000019261	si:dkey-16l2.16	87	47.802	ENSHBUG00000000993	rab30	81	47.753
ENSHBUG00000019261	si:dkey-16l2.16	100	34.419	ENSHBUG00000001595	rab9b	80	37.017
ENSHBUG00000019261	si:dkey-16l2.16	99	69.082	ENSHBUG00000001416	rab35b	86	78.613
ENSHBUG00000019261	si:dkey-16l2.16	96	32.367	ENSHBUG00000022669	rab9a	79	37.500
ENSHBUG00000019261	si:dkey-16l2.16	98	41.148	ENSHBUG00000009947	-	80	44.828
ENSHBUG00000019261	si:dkey-16l2.16	73	36.250	ENSHBUG00000013010	rab32b	73	36.250
ENSHBUG00000019261	si:dkey-16l2.16	76	36.646	ENSHBUG00000013197	kras	88	33.929
ENSHBUG00000019261	si:dkey-16l2.16	77	39.634	ENSHBUG00000012905	rab6ba	79	39.634
ENSHBUG00000019261	si:dkey-16l2.16	96	37.313	ENSHBUG00000002014	rab5c	72	43.038
ENSHBUG00000019261	si:dkey-16l2.16	77	46.341	ENSHBUG00000013570	-	75	47.500
ENSHBUG00000019261	si:dkey-16l2.16	80	38.728	ENSHBUG00000010852	RAB7A	83	38.728
ENSHBUG00000019261	si:dkey-16l2.16	77	43.902	ENSHBUG00000015126	rab42a	62	43.902
ENSHBUG00000019261	si:dkey-16l2.16	75	40.506	ENSHBUG00000003434	rab22a	65	40.506
ENSHBUG00000019261	si:dkey-16l2.16	76	36.646	ENSHBUG00000011998	hrasb	83	36.646
ENSHBUG00000019261	si:dkey-16l2.16	73	34.615	ENSHBUG00000017973	si:ch73-116o1.2	82	33.140
ENSHBUG00000019261	si:dkey-16l2.16	55	31.356	ENSHBUG00000012803	arl4aa	59	31.356
ENSHBUG00000019261	si:dkey-16l2.16	55	30.172	ENSHBUG00000000803	arl3	61	30.172
ENSHBUG00000019261	si:dkey-16l2.16	77	31.481	ENSHBUG00000018763	rras	82	31.481
ENSHBUG00000019261	si:dkey-16l2.16	98	38.942	ENSHBUG00000009333	rab11al	74	47.170
ENSHBUG00000019261	si:dkey-16l2.16	97	33.333	ENSHBUG00000014023	si:dkey-13a21.4	81	37.500
ENSHBUG00000019261	si:dkey-16l2.16	73	40.260	ENSHBUG00000014338	RAB41	73	40.260
ENSHBUG00000019261	si:dkey-16l2.16	69	48.026	ENSHBUG00000001714	-	79	42.632
ENSHBUG00000019261	si:dkey-16l2.16	88	42.929	ENSHBUG00000007827	zgc:101559	79	43.478
ENSHBUG00000019261	si:dkey-16l2.16	77	39.634	ENSHBUG00000003230	rab6bb	77	39.216
ENSHBUG00000019261	si:dkey-16l2.16	92	45.876	ENSHBUG00000017297	rab15	82	48.851
ENSHBUG00000019261	si:dkey-16l2.16	78	42.945	ENSHBUG00000006056	-	76	42.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019261	si:dkey-16l2.16	100	94.737	ENSAPOG00000008263	si:dkey-16l2.16	100	94.737	Acanthochromis_polyacanthus
ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	ENSAOCG00000016825	si:dkey-16l2.16	100	96.172	Amphiprion_ocellaris
ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	ENSAPEG00000006500	si:dkey-16l2.16	100	96.172	Amphiprion_percula
ENSHBUG00000019261	si:dkey-16l2.16	100	94.737	ENSATEG00000019238	si:dkey-16l2.16	100	94.737	Anabas_testudineus
ENSHBUG00000019261	si:dkey-16l2.16	100	99.522	ENSACLG00000018721	si:dkey-16l2.16	100	99.522	Astatotilapia_calliptera
ENSHBUG00000019261	si:dkey-16l2.16	100	95.215	ENSAMXG00000038243	si:dkey-16l2.16	100	95.215	Astyanax_mexicanus
ENSHBUG00000019261	si:dkey-16l2.16	56	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSHBUG00000019261	si:dkey-16l2.16	100	94.737	ENSCVAG00000003537	si:dkey-16l2.16	100	94.737	Cyprinodon_variegatus
ENSHBUG00000019261	si:dkey-16l2.16	100	93.301	ENSDARG00000037967	si:dkey-16l2.16	99	98.305	Danio_rerio
ENSHBUG00000019261	si:dkey-16l2.16	99	87.981	ENSELUG00000023247	si:dkey-16l2.16	99	87.019	Esox_lucius
ENSHBUG00000019261	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSHBUG00000019261	si:dkey-16l2.16	77	85.714	ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	Gadus_morhua
ENSHBUG00000019261	si:dkey-16l2.16	100	88.517	ENSGAFG00000005388	si:dkey-16l2.16	100	88.517	Gambusia_affinis
ENSHBUG00000019261	si:dkey-16l2.16	100	95.215	ENSGACG00000014915	si:dkey-16l2.16	98	95.215	Gasterosteus_aculeatus
ENSHBUG00000019261	si:dkey-16l2.16	100	93.780	ENSHCOG00000006538	si:dkey-16l2.16	100	93.780	Hippocampus_comes
ENSHBUG00000019261	si:dkey-16l2.16	100	90.909	ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	Kryptolebias_marmoratus
ENSHBUG00000019261	si:dkey-16l2.16	100	95.694	ENSLBEG00000007681	si:dkey-16l2.16	100	95.694	Labrus_bergylta
ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	Mastacembelus_armatus
ENSHBUG00000019261	si:dkey-16l2.16	100	99.522	ENSMZEG00005002081	si:dkey-16l2.16	100	99.522	Maylandia_zebra
ENSHBUG00000019261	si:dkey-16l2.16	99	95.631	ENSMMOG00000020140	si:dkey-16l2.16	97	95.631	Mola_mola
ENSHBUG00000019261	si:dkey-16l2.16	100	93.780	ENSMALG00000014727	si:dkey-16l2.16	99	93.780	Monopterus_albus
ENSHBUG00000019261	si:dkey-16l2.16	100	99.043	ENSNBRG00000008930	si:dkey-16l2.16	100	99.043	Neolamprologus_brichardi
ENSHBUG00000019261	si:dkey-16l2.16	100	99.522	ENSONIG00000009443	si:dkey-16l2.16	100	99.522	Oreochromis_niloticus
ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	ENSORLG00000001098	si:dkey-16l2.16	99	89.474	Oryzias_latipes
ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	ENSORLG00020000867	si:dkey-16l2.16	99	89.474	Oryzias_latipes_hni
ENSHBUG00000019261	si:dkey-16l2.16	100	88.517	ENSOMEG00000015474	si:dkey-16l2.16	100	88.038	Oryzias_melastigma
ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	ENSPKIG00000005686	-	100	94.258	Paramormyrops_kingsleyae
ENSHBUG00000019261	si:dkey-16l2.16	100	79.904	ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	Paramormyrops_kingsleyae
ENSHBUG00000019261	si:dkey-16l2.16	100	93.780	ENSPMGG00000000751	si:dkey-16l2.16	100	93.780	Periophthalmus_magnuspinnatus
ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	ENSPFOG00000004746	si:dkey-16l2.16	100	89.474	Poecilia_formosa
ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	Poecilia_latipinna
ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	Poecilia_mexicana
ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	ENSPREG00000005323	si:dkey-16l2.16	100	88.995	Poecilia_reticulata
ENSHBUG00000019261	si:dkey-16l2.16	100	100.000	ENSPNYG00000009490	si:dkey-16l2.16	100	100.000	Pundamilia_nyererei
ENSHBUG00000019261	si:dkey-16l2.16	100	95.694	ENSPNAG00000018986	si:dkey-16l2.16	100	95.694	Pygocentrus_nattereri
ENSHBUG00000019261	si:dkey-16l2.16	99	82.212	ENSSFOG00015006414	-	85	85.311	Scleropages_formosus
ENSHBUG00000019261	si:dkey-16l2.16	100	93.301	ENSSFOG00015021448	-	100	93.301	Scleropages_formosus
ENSHBUG00000019261	si:dkey-16l2.16	100	90.431	ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	Scophthalmus_maximus
ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	ENSSDUG00000005719	si:dkey-16l2.16	100	96.172	Seriola_dumerili
ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	Seriola_lalandi_dorsalis
ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	ENSSPAG00000006302	si:dkey-16l2.16	100	96.172	Stegastes_partitus
ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	ENSTRUG00000025076	si:dkey-16l2.16	100	94.258	Takifugu_rubripes
ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	ENSTNIG00000011300	si:dkey-16l2.16	100	94.258	Tetraodon_nigroviridis
ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	ENSXMAG00000021767	si:dkey-16l2.16	100	88.995	Xiphophorus_maculatus