EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000019288 (Gene tree)
Gene ID: 102298176
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 15691 bases
Position: chrJH425665.1:323131-338821
Accession: 102298176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017271	YTH	PF04146.15	9.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000034576	-	7451	XM_005942552	ENSHBUP00000017271	683 (aa)	XP_005942614	UPI0003BD7B2E

Gene Model

Click here to download ENSHBUG00000019288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000019288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019288	ythdc1	59	66.362	ENSG00000083896	YTHDC1	93	51.120	Homo_sapiens
ENSHBUG00000019288	ythdc1	82	86.170	ENSAPOG00000013997	ythdc1	93	79.531	Acanthochromis_polyacanthus
ENSHBUG00000019288	ythdc1	59	66.133	ENSAMEG00000005688	YTHDC1	57	60.092	Ailuropoda_melanoleuca
ENSHBUG00000019288	ythdc1	81	95.070	ENSACIG00000019728	ythdc1	92	83.698	Amphilophus_citrinellus
ENSHBUG00000019288	ythdc1	94	91.549	ENSAOCG00000000239	ythdc1	94	91.549	Amphiprion_ocellaris
ENSHBUG00000019288	ythdc1	84	90.385	ENSAPEG00000000618	ythdc1	90	90.385	Amphiprion_percula
ENSHBUG00000019288	ythdc1	88	87.273	ENSATEG00000023007	ythdc1	92	88.091	Anabas_testudineus
ENSHBUG00000019288	ythdc1	92	54.867	ENSAPLG00000009921	YTHDC1	60	60.780	Anas_platyrhynchos
ENSHBUG00000019288	ythdc1	93	55.043	ENSACAG00000009697	YTHDC1	58	59.404	Anolis_carolinensis
ENSHBUG00000019288	ythdc1	59	66.362	ENSANAG00000001522	YTHDC1	57	59.633	Aotus_nancymaae
ENSHBUG00000019288	ythdc1	100	99.854	ENSACLG00000019371	ythdc1	100	99.854	Astatotilapia_calliptera
ENSHBUG00000019288	ythdc1	93	63.761	ENSAMXG00000006978	ythdc1	92	60.241	Astyanax_mexicanus
ENSHBUG00000019288	ythdc1	59	65.217	ENSBTAG00000015572	YTHDC1	57	59.404	Bos_taurus
ENSHBUG00000019288	ythdc1	59	66.362	ENSCJAG00000009934	YTHDC1	57	59.633	Callithrix_jacchus
ENSHBUG00000019288	ythdc1	59	66.133	ENSCAFG00000002821	YTHDC1	57	60.092	Canis_familiaris
ENSHBUG00000019288	ythdc1	59	66.133	ENSCAFG00020027112	YTHDC1	57	60.092	Canis_lupus_dingo
ENSHBUG00000019288	ythdc1	69	54.286	ENSCHIG00000004810	YTHDC1	54	54.197	Capra_hircus
ENSHBUG00000019288	ythdc1	59	66.362	ENSTSYG00000011668	YTHDC1	92	52.263	Carlito_syrichta
ENSHBUG00000019288	ythdc1	91	41.755	ENSCAPG00000008722	YTHDC1	68	42.355	Cavia_aperea
ENSHBUG00000019288	ythdc1	59	59.039	ENSCPOG00000010929	YTHDC1	92	47.881	Cavia_porcellus
ENSHBUG00000019288	ythdc1	59	66.362	ENSCCAG00000035754	YTHDC1	57	59.633	Cebus_capucinus
ENSHBUG00000019288	ythdc1	59	66.268	ENSCATG00000036320	YTHDC1	93	53.801	Cercocebus_atys
ENSHBUG00000019288	ythdc1	92	54.772	ENSCLAG00000005482	YTHDC1	58	58.333	Chinchilla_lanigera
ENSHBUG00000019288	ythdc1	59	66.362	ENSCSAG00000005252	YTHDC1	57	59.633	Chlorocebus_sabaeus
ENSHBUG00000019288	ythdc1	93	58.537	ENSCPBG00000021965	YTHDC1	94	51.574	Chrysemys_picta_bellii
ENSHBUG00000019288	ythdc1	59	66.362	ENSCANG00000004769	YTHDC1	92	53.606	Colobus_angolensis_palliatus
ENSHBUG00000019288	ythdc1	59	66.029	ENSCGRG00001000816	Ythdc1	93	51.971	Cricetulus_griseus_chok1gshd
ENSHBUG00000019288	ythdc1	59	66.133	ENSCGRG00000009807	Ythdc1	92	51.627	Cricetulus_griseus_crigri
ENSHBUG00000019288	ythdc1	94	83.670	ENSCSEG00000020404	ythdc1	94	83.670	Cynoglossus_semilaevis
ENSHBUG00000019288	ythdc1	94	80.908	ENSCVAG00000022349	ythdc1	94	82.188	Cyprinodon_variegatus
ENSHBUG00000019288	ythdc1	93	63.623	ENSDARG00000051953	ythdc1	92	59.271	Danio_rerio
ENSHBUG00000019288	ythdc1	93	53.824	ENSDNOG00000004949	YTHDC1	57	59.633	Dasypus_novemcinctus
ENSHBUG00000019288	ythdc1	59	66.362	ENSDORG00000013045	Ythdc1	58	59.633	Dipodomys_ordii
ENSHBUG00000019288	ythdc1	78	65.385	ENSETEG00000001878	YTHDC1	51	82.000	Echinops_telfairi
ENSHBUG00000019288	ythdc1	59	66.133	ENSEASG00005018383	YTHDC1	61	60.092	Equus_asinus_asinus
ENSHBUG00000019288	ythdc1	92	69.192	ENSECAG00000018303	YTHDC1	78	66.304	Equus_caballus
ENSHBUG00000019288	ythdc1	59	65.148	ENSEEUG00000015466	YTHDC1	57	59.404	Erinaceus_europaeus
ENSHBUG00000019288	ythdc1	93	61.152	ENSELUG00000014029	ythdc1	92	58.136	Esox_lucius
ENSHBUG00000019288	ythdc1	59	66.133	ENSFCAG00000026791	YTHDC1	57	60.780	Felis_catus
ENSHBUG00000019288	ythdc1	76	62.882	ENSFALG00000006581	YTHDC1	83	66.576	Ficedula_albicollis
ENSHBUG00000019288	ythdc1	59	66.133	ENSFDAG00000018560	YTHDC1	58	59.633	Fukomys_damarensis
ENSHBUG00000019288	ythdc1	92	55.387	ENSGALG00000035906	YTHDC1	54	61.687	Gallus_gallus
ENSHBUG00000019288	ythdc1	94	71.552	ENSGACG00000015486	ythdc1	94	71.839	Gasterosteus_aculeatus
ENSHBUG00000019288	ythdc1	93	58.182	ENSGAGG00000007108	YTHDC1	92	54.098	Gopherus_agassizii
ENSHBUG00000019288	ythdc1	59	66.268	ENSGGOG00000021958	YTHDC1	93	53.696	Gorilla_gorilla
ENSHBUG00000019288	ythdc1	93	56.305	ENSHGLG00000006319	-	58	58.559	Heterocephalus_glaber_female
ENSHBUG00000019288	ythdc1	93	55.887	ENSHGLG00100001556	-	58	57.432	Heterocephalus_glaber_male
ENSHBUG00000019288	ythdc1	69	79.847	ENSHCOG00000001520	ythdc1	88	76.286	Hippocampus_comes
ENSHBUG00000019288	ythdc1	93	63.538	ENSIPUG00000018136	ythdc1	92	60.462	Ictalurus_punctatus
ENSHBUG00000019288	ythdc1	59	65.169	ENSSTOG00000013652	YTHDC1	57	58.559	Ictidomys_tridecemlineatus
ENSHBUG00000019288	ythdc1	59	65.789	ENSJJAG00000010268	Ythdc1	57	60.482	Jaculus_jaculus
ENSHBUG00000019288	ythdc1	60	91.484	ENSKMAG00000006483	ythdc1	87	93.012	Kryptolebias_marmoratus
ENSHBUG00000019288	ythdc1	69	97.778	ENSLBEG00000020831	ythdc1	88	97.778	Labrus_bergylta
ENSHBUG00000019288	ythdc1	59	63.205	ENSLACG00000004893	YTHDC1	61	60.225	Latimeria_chalumnae
ENSHBUG00000019288	ythdc1	93	58.250	ENSLOCG00000003045	ythdc1	87	55.396	Lepisosteus_oculatus
ENSHBUG00000019288	ythdc1	93	55.367	ENSLAFG00000021592	YTHDC1	92	51.893	Loxodonta_africana
ENSHBUG00000019288	ythdc1	59	66.268	ENSMFAG00000031927	YTHDC1	92	53.606	Macaca_fascicularis
ENSHBUG00000019288	ythdc1	59	66.362	ENSMMUG00000002265	YTHDC1	57	59.633	Macaca_mulatta
ENSHBUG00000019288	ythdc1	59	66.362	ENSMNEG00000033751	YTHDC1	92	53.606	Macaca_nemestrina
ENSHBUG00000019288	ythdc1	59	66.362	ENSMLEG00000042147	YTHDC1	92	53.606	Mandrillus_leucophaeus
ENSHBUG00000019288	ythdc1	94	85.294	ENSMAMG00000013122	ythdc1	92	87.733	Mastacembelus_armatus
ENSHBUG00000019288	ythdc1	100	99.854	ENSMZEG00005023173	ythdc1	100	99.854	Maylandia_zebra
ENSHBUG00000019288	ythdc1	93	55.313	ENSMGAG00000010391	YTHDC1	59	60.321	Meleagris_gallopavo
ENSHBUG00000019288	ythdc1	59	66.029	ENSMAUG00000001286	Ythdc1	93	51.825	Mesocricetus_auratus
ENSHBUG00000019288	ythdc1	93	54.393	ENSMICG00000034640	YTHDC1	93	52.235	Microcebus_murinus
ENSHBUG00000019288	ythdc1	59	66.029	ENSMOCG00000020201	Ythdc1	92	52.053	Microtus_ochrogaster
ENSHBUG00000019288	ythdc1	75	81.461	ENSMMOG00000021200	ythdc1	93	73.494	Mola_mola
ENSHBUG00000019288	ythdc1	97	41.010	ENSMODG00000014337	-	57	62.637	Monodelphis_domestica
ENSHBUG00000019288	ythdc1	93	56.871	ENSMODG00000020754	-	92	52.305	Monodelphis_domestica
ENSHBUG00000019288	ythdc1	64	44.885	ENSMODG00000009173	-	60	59.091	Monodelphis_domestica
ENSHBUG00000019288	ythdc1	50	48.857	ENSMODG00000004117	-	74	58.730	Monodelphis_domestica
ENSHBUG00000019288	ythdc1	83	87.086	ENSMALG00000013412	ythdc1	93	86.596	Monopterus_albus
ENSHBUG00000019288	ythdc1	59	66.133	MGP_CAROLIEiJ_G0027347	Ythdc1	93	52.602	Mus_caroli
ENSHBUG00000019288	ythdc1	93	55.337	ENSMUSG00000035851	Ythdc1	93	52.896	Mus_musculus
ENSHBUG00000019288	ythdc1	93	54.916	MGP_PahariEiJ_G0017126	Ythdc1	93	52.896	Mus_pahari
ENSHBUG00000019288	ythdc1	93	54.494	MGP_SPRETEiJ_G0028339	Ythdc1	93	52.896	Mus_spretus
ENSHBUG00000019288	ythdc1	75	66.818	ENSMPUG00000001743	YTHDC1	68	65.657	Mustela_putorius_furo
ENSHBUG00000019288	ythdc1	59	65.904	ENSMLUG00000016300	YTHDC1	92	51.804	Myotis_lucifugus
ENSHBUG00000019288	ythdc1	73	100.000	ENSNBRG00000007663	ythdc1	100	85.138	Neolamprologus_brichardi
ENSHBUG00000019288	ythdc1	59	64.270	ENSNLEG00000009202	YTHDC1	92	53.229	Nomascus_leucogenys
ENSHBUG00000019288	ythdc1	71	69.159	ENSOPRG00000008986	YTHDC1	54	62.893	Ochotona_princeps
ENSHBUG00000019288	ythdc1	93	56.491	ENSODEG00000001715	YTHDC1	57	60.092	Octodon_degus
ENSHBUG00000019288	ythdc1	99	99.706	ENSONIG00000012651	ythdc1	100	99.706	Oreochromis_niloticus
ENSHBUG00000019288	ythdc1	85	69.173	ENSOCUG00000015886	YTHDC1	63	66.304	Oryctolagus_cuniculus
ENSHBUG00000019288	ythdc1	94	82.629	ENSORLG00000030544	ythdc1	95	81.406	Oryzias_latipes
ENSHBUG00000019288	ythdc1	94	83.412	ENSORLG00020019316	ythdc1	95	82.003	Oryzias_latipes_hni
ENSHBUG00000019288	ythdc1	94	77.984	ENSOMEG00000000551	ythdc1	95	78.173	Oryzias_melastigma
ENSHBUG00000019288	ythdc1	59	66.819	ENSOGAG00000003362	YTHDC1	92	52.125	Otolemur_garnettii
ENSHBUG00000019288	ythdc1	59	65.217	ENSOARG00000008633	YTHDC1	57	59.404	Ovis_aries
ENSHBUG00000019288	ythdc1	59	66.268	ENSPPAG00000041315	YTHDC1	93	54.297	Pan_paniscus
ENSHBUG00000019288	ythdc1	59	66.029	ENSPPRG00000011979	YTHDC1	56	60.964	Panthera_pardus
ENSHBUG00000019288	ythdc1	59	65.550	ENSPTIG00000015527	YTHDC1	58	58.559	Panthera_tigris_altaica
ENSHBUG00000019288	ythdc1	59	66.268	ENSPTRG00000016105	YTHDC1	93	54.297	Pan_troglodytes
ENSHBUG00000019288	ythdc1	59	66.268	ENSPANG00000021590	YTHDC1	92	53.696	Papio_anubis
ENSHBUG00000019288	ythdc1	93	60.499	ENSPKIG00000018497	ythdc1	92	56.912	Paramormyrops_kingsleyae
ENSHBUG00000019288	ythdc1	92	54.692	ENSPSIG00000002782	YTHDC1	92	51.017	Pelodiscus_sinensis
ENSHBUG00000019288	ythdc1	57	73.273	ENSPMGG00000000970	-	78	72.072	Periophthalmus_magnuspinnatus
ENSHBUG00000019288	ythdc1	59	66.133	ENSPEMG00000013850	Ythdc1	92	51.556	Peromyscus_maniculatus_bairdii
ENSHBUG00000019288	ythdc1	93	56.871	ENSPCIG00000006870	YTHDC1	92	52.616	Phascolarctos_cinereus
ENSHBUG00000019288	ythdc1	94	79.656	ENSPFOG00000013404	ythdc1	94	81.847	Poecilia_formosa
ENSHBUG00000019288	ythdc1	60	87.010	ENSPLAG00000011079	ythdc1	87	87.348	Poecilia_latipinna
ENSHBUG00000019288	ythdc1	94	79.969	ENSPMEG00000009238	ythdc1	94	82.160	Poecilia_mexicana
ENSHBUG00000019288	ythdc1	94	68.118	ENSPREG00000016973	ythdc1	90	81.541	Poecilia_reticulata
ENSHBUG00000019288	ythdc1	59	66.362	ENSPPYG00000014726	YTHDC1	65	59.633	Pongo_abelii
ENSHBUG00000019288	ythdc1	77	58.333	ENSPCAG00000009607	YTHDC1	69	62.346	Procavia_capensis
ENSHBUG00000019288	ythdc1	93	51.395	ENSPCOG00000019105	YTHDC1	92	50.074	Propithecus_coquereli
ENSHBUG00000019288	ythdc1	59	62.929	ENSPVAG00000015551	YTHDC1	56	57.569	Pteropus_vampyrus
ENSHBUG00000019288	ythdc1	99	99.853	ENSPNYG00000011687	ythdc1	100	99.853	Pundamilia_nyererei
ENSHBUG00000019288	ythdc1	93	64.939	ENSPNAG00000028365	ythdc1	92	60.542	Pygocentrus_nattereri
ENSHBUG00000019288	ythdc1	59	64.944	ENSRNOG00000001996	Ythdc1	93	51.604	Rattus_norvegicus
ENSHBUG00000019288	ythdc1	59	65.463	ENSRBIG00000028279	YTHDC1	92	53.425	Rhinopithecus_bieti
ENSHBUG00000019288	ythdc1	59	66.362	ENSRROG00000035028	YTHDC1	92	53.606	Rhinopithecus_roxellana
ENSHBUG00000019288	ythdc1	59	66.268	ENSSBOG00000022353	YTHDC1	92	53.606	Saimiri_boliviensis_boliviensis
ENSHBUG00000019288	ythdc1	93	55.947	ENSSHAG00000002538	YTHDC1	92	51.585	Sarcophilus_harrisii
ENSHBUG00000019288	ythdc1	93	60.790	ENSSFOG00015003298	ythdc1	59	69.175	Scleropages_formosus
ENSHBUG00000019288	ythdc1	94	83.670	ENSSMAG00000009086	ythdc1	94	84.317	Scophthalmus_maximus
ENSHBUG00000019288	ythdc1	94	91.149	ENSSDUG00000022008	ythdc1	94	91.770	Seriola_dumerili
ENSHBUG00000019288	ythdc1	94	91.149	ENSSLDG00000007926	ythdc1	94	91.770	Seriola_lalandi_dorsalis
ENSHBUG00000019288	ythdc1	59	65.446	ENSSARG00000010960	YTHDC1	72	59.404	Sorex_araneus
ENSHBUG00000019288	ythdc1	93	55.522	ENSSPUG00000009357	YTHDC1	92	52.624	Sphenodon_punctatus
ENSHBUG00000019288	ythdc1	94	90.994	ENSSPAG00000011449	ythdc1	94	92.081	Stegastes_partitus
ENSHBUG00000019288	ythdc1	59	66.133	ENSSSCG00000035505	YTHDC1	93	51.460	Sus_scrofa
ENSHBUG00000019288	ythdc1	93	54.755	ENSTGUG00000004452	-	59	60.550	Taeniopygia_guttata
ENSHBUG00000019288	ythdc1	94	70.788	ENSTRUG00000010142	ythdc1	85	85.000	Takifugu_rubripes
ENSHBUG00000019288	ythdc1	96	74.355	ENSTNIG00000013243	ythdc1	91	75.975	Tetraodon_nigroviridis
ENSHBUG00000019288	ythdc1	59	64.989	ENSTTRG00000005083	YTHDC1	57	59.633	Tursiops_truncatus
ENSHBUG00000019288	ythdc1	59	66.133	ENSUAMG00000010388	YTHDC1	61	60.092	Ursus_americanus
ENSHBUG00000019288	ythdc1	92	51.194	ENSUMAG00000013668	YTHDC1	61	51.810	Ursus_maritimus
ENSHBUG00000019288	ythdc1	93	53.701	ENSVPAG00000009040	YTHDC1	92	52.416	Vicugna_pacos
ENSHBUG00000019288	ythdc1	59	66.133	ENSVVUG00000005387	YTHDC1	61	60.092	Vulpes_vulpes
ENSHBUG00000019288	ythdc1	93	57.078	ENSXETG00000017960	ythdc1	57	64.951	Xenopus_tropicalis
ENSHBUG00000019288	ythdc1	52	76.415	ENSXCOG00000000530	ythdc1	82	66.667	Xiphophorus_couchianus
ENSHBUG00000019288	ythdc1	94	81.064	ENSXMAG00000005196	ythdc1	94	79.938	Xiphophorus_maculatus