EuRBPDB

Description

Ensembl ID: ENSHBUG00000019347 (Gene tree)
Gene ID: 102312719
Gene Symbol: -
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9841 bases
Position: chrJH425389.1:1501523-1511363
Accession: 102312719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000017325	RRM_1	PF00076.22	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000026086	-	4689	XM_005925050	ENSHBUP00000017325	1224 (aa)	XP_005925112	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000019347	-	96	60.855	ENSAPEG00000014568	si:dkey-93h22.8	99	61.266	Amphiprion_percula
ENSHBUG00000019347	-	100	99.101	ENSACLG00000019359	-	100	99.101	Astatotilapia_calliptera
ENSHBUG00000019347	-	53	60.526	ENSAMXG00000020783	si:dkey-93h22.8	60	60.526	Astyanax_mexicanus
ENSHBUG00000019347	-	54	58.824	ENSDARG00000098666	si:dkey-93h22.8	59	59.740	Danio_rerio
ENSHBUG00000019347	-	78	66.667	ENSELUG00000018785	-	84	66.667	Esox_lucius
ENSHBUG00000019347	-	96	99.062	ENSMZEG00005008228	-	100	99.062	Maylandia_zebra
ENSHBUG00000019347	-	67	75.484	ENSORLG00000012355	si:dkey-93h22.8	80	75.484	Oryzias_latipes
ENSHBUG00000019347	-	54	76.129	ENSORLG00020004449	si:dkey-93h22.8	63	76.129	Oryzias_latipes_hni
ENSHBUG00000019347	-	67	77.215	ENSORLG00015002960	si:dkey-93h22.8	80	76.774	Oryzias_latipes_hsok
ENSHBUG00000019347	-	55	77.215	ENSOMEG00000012140	si:dkey-93h22.8	63	77.070	Oryzias_melastigma
ENSHBUG00000019347	-	55	82.911	ENSPFOG00000001320	si:dkey-93h22.8	63	82.803	Poecilia_formosa
ENSHBUG00000019347	-	55	82.911	ENSPLAG00000001769	si:dkey-93h22.8	58	82.803	Poecilia_latipinna
ENSHBUG00000019347	-	55	82.911	ENSPMEG00000014605	si:dkey-93h22.8	59	82.803	Poecilia_mexicana
ENSHBUG00000019347	-	80	82.911	ENSPREG00000000446	si:dkey-93h22.8	86	82.803	Poecilia_reticulata
ENSHBUG00000019347	-	96	98.977	ENSPNYG00000002682	-	100	98.977	Pundamilia_nyererei
ENSHBUG00000019347	-	96	61.557	ENSSDUG00000001268	si:dkey-93h22.8	99	61.890	Seriola_dumerili
ENSHBUG00000019347	-	96	60.995	ENSSLDG00000012010	si:dkey-93h22.8	99	61.169	Seriola_lalandi_dorsalis